Basic Information

Insect: Conogethes punctiferalis
Gene Symbol: -
Assembly: GCA_031163375.1
Location: CM062106.1:2002146-2026127[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.0043 0.34 12.1 0.4 1 23 400 422 400 422 0.98

2 11 0.00018 0.014 16.4 7.5 1 23 429 452 429 452 0.98

3 11 0.12 9.2 7.6 1.6 1 23 456 478 456 478 0.96

4 11 0.009 0.7 11.1 0.8 1 23 483 506 483 506 0.98

5 11 0.0073 0.57 11.4 0.5 1 23 510 533 510 533 0.96

6 11 0.0013 0.1 13.7 0.1 3 21 546 564 545 569 0.93

7 11 0.77 60 5.0 0.4 2 23 614 636 613 636 0.95

8 11 0.0088 0.69 11.1 2.6 2 20 652 670 651 673 0.92

9 11 0.00025 0.019 16.0 0.7 1 23 679 701 679 701 0.98

10 11 8.8e-05 0.0069 17.4 4.3 1 23 708 730 708 730 0.97

11 11 4.3e-05 0.0033 18.4 0.5 1 23 736 759 736 759 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.0043	0.34	12.1	0.4	1	23	400	422	400	422	0.98
2	11	0.00018	0.014	16.4	7.5	1	23	429	452	429	452	0.98
3	11	0.12	9.2	7.6	1.6	1	23	456	478	456	478	0.96
4	11	0.009	0.7	11.1	0.8	1	23	483	506	483	506	0.98
5	11	0.0073	0.57	11.4	0.5	1	23	510	533	510	533	0.96
6	11	0.0013	0.1	13.7	0.1	3	21	546	564	545	569	0.93
7	11	0.77	60	5.0	0.4	2	23	614	636	613	636	0.95
8	11	0.0088	0.69	11.1	2.6	2	20	652	670	651	673	0.92
9	11	0.00025	0.019	16.0	0.7	1	23	679	701	679	701	0.98
10	11	8.8e-05	0.0069	17.4	4.3	1	23	708	730	708	730	0.97
11	11	4.3e-05	0.0033	18.4	0.5	1	23	736	759	736	759	0.93

Sequence Information

Coding Sequence: atgaggTGTTCTGTACTTGGGTGTAGAAATGATACGAAATACAATAACAAATTGCAAGGAATTACTTTTCATCTGATTCCTATGGAACCTTCGCTCCGGACGGCGTGGCTCCAGGCGATAGGCAGGGAGGGTTGGCAACCGAAGGGCAGAAGTACAGTTTGCTCCGACCACTTCCTATGCGAGGACCTCTACGACACGAGGATTGGTTTGAGGAGGGTACGGCCGGGAGCCGTGCCTGCTATATTTCAGGTGTGCAGGATATGTTTGGCAACTGGTTGCAAGCTGTTGTCTATGAAGAAGTACAAATTGGAAGACGCGTATAAGGATCTTACTGGAGTATTGCCATACATCGACGACCGGTTACCCCAAAGCCTTTGCGTGGAATGCGCCCAACGCCTCGCTAGTTGCCTACTCCTGCGCAAGCGCAGCCTGCGCGCCAACGCACTCCTCTCCGACTTGCTGAAGGAACAGGATCTGGTGACAGTCAAGACCGTCAAAGTAATAAATCGCAAGGACAACCAGCTAGTGTCCCGTCTCGCCCCAAAAGTGTTTACACCAGACCATTACTACTTAACCCTCAATCACGACGATGTAGTCAATCAAAAATCTACAGAAGAATCCGTTACTAATGCAGAACCAGAAATCAAAGACGAAAATGATTGCAACGAGATATTTATATGCGAATTCGATGATACAGAATCTAATGGAACTGACATTGATGGAGCTTCTGAAAAggtttttgatgatgatgatgataatgaatttgAGGTTacgatggatgatgatgatgataatgaatttgAGGTTACgaacgatgatgataataaggaATTTGAGGTTAAGAATGAGAACGATGATGAATTTGATGAGCCGAAAGATGGGGATGACCTTGTAGCATCAGATTCGTCGACTGATGAGGAAATCCTCATCCCAGTCCAGTCCCCTTGGCAAGTGCCAAGGGGTGTGCTTAGAATCAGGTTGCAGAACGGGAGGGAGAAAGGAGGAAAGGGACAGAAGAAAGGGATGAAGTGTAAAGATAAGAAACCGGAACAACCTAAAGCGGATAGAAGGCGGAAACCTTTCTTTAACGATGAAGGTTTGAGAGAGAAGCTGTTCACGATAACGGATTTGACTCATGATGAGCAAGTAGCCGAGTTTGATAAGAGAAAAGAGAGTTCTAATTACAAAAATGGCGTTTATAAATGTCAGGAATGCTATAAAGGGTTTTTGGATGAGGACGCTTATAATTCACATATGGCGAGGCATAcaaatGAAAGCGGCGAATATCGCTGCCATATATGCAAGACTCACTTCAAGCACCCGAAAGCGCTGCGCAATCACATCACTACGCAACACACGCATCGGTTCAGCTGCAAGCAGTGCCCGTACGCGACCACGCACCGCCAGTCGGCGCGGCTGCACGGGCGCTGGCACAAGGGCACCAAGTACACCTGCCCGCACTGCCCCAACGAGTTCGTCAAGATTACCACGTACATGGGCCACATCCGCATCAAACACCCGTCTGACTTCGTGTGTCAGCTGTGCGGCTTCTCCTTCGTCAGCGAGAAGGGCATCCAGCTGCACAAGAGATTGAAGCATCGGCAGGATGTCCAGATACCGGAAGACGGTCCCTTCTGCGAGCTGTGTAACCTCCGCTTCGTCGACCCTGAGGCCCTCCGGCGCCACATCAGCGTGTCAGCGCGCCACAACACGCTGGACAAGAGTAAGAGGGCGCCCAACCAGCCGACTTACCAGCGGGGGAGGGAGCGGCGCGCGCGGGACGCGGGGGAGGAGGACGCCGAGTGCGCCGGGGCGGGGAGACGCGCGGAGGGACCTATACCGTGTGAGCAGTGTGGCATGCAGCTGGTCGACTCTCGCGCGTACCACGGCCACTTCAGGCGCATGCACCCGGACAAGAATCGAACCAACTACCCGTCTATGAAGTCTCCCTGCATGTGCGAAGTCTGCGGGCGCATGTTCCAGAGCTACACCCACCTCAAGGACCACCGCTGGGTCCACACCGGCGAGAGGCCGTTCAGCTGCGACGCGTGCGGCAAATCGTTCCGCATGAAGCAGCGGCTGGTGGCTCATAGAAAGGTGCACAGCGCGGAGAAGGCGACGTACGCGTGCGCTCTGTGCGGGAAGCACTTTAGCACGCACAGCAACCGGCAGCGGCATATGTTTATCCACACGGGCCTGAAGCCGTTCAAGTGTGAGATGTGCGGCAAGGGCTTCAAGCGCGCCAGCGAGAAGCGCGCGCACGTCACCTACGTGCACCTCAAGAAGCCCTGGCCCAAGCGCAGCCGCGGCAAGCGGCGGCAACAGGTACCGATGCCGCCCCCGCCCCAGACGTGA
Protein Sequence: MRCSVLGCRNDTKYNNKLQGITFHLIPMEPSLRTAWLQAIGREGWQPKGRSTVCSDHFLCEDLYDTRIGLRRVRPGAVPAIFQVCRICLATGCKLLSMKKYKLEDAYKDLTGVLPYIDDRLPQSLCVECAQRLASCLLLRKRSLRANALLSDLLKEQDLVTVKTVKVINRKDNQLVSRLAPKVFTPDHYYLTLNHDDVVNQKSTEESVTNAEPEIKDENDCNEIFICEFDDTESNGTDIDGASEKVFDDDDDNEFEVTMDDDDDNEFEVTNDDDNKEFEVKNENDDEFDEPKDGDDLVASDSSTDEEILIPVQSPWQVPRGVLRIRLQNGREKGGKGQKKGMKCKDKKPEQPKADRRRKPFFNDEGLREKLFTITDLTHDEQVAEFDKRKESSNYKNGVYKCQECYKGFLDEDAYNSHMARHTNESGEYRCHICKTHFKHPKALRNHITTQHTHRFSCKQCPYATTHRQSARLHGRWHKGTKYTCPHCPNEFVKITTYMGHIRIKHPSDFVCQLCGFSFVSEKGIQLHKRLKHRQDVQIPEDGPFCELCNLRFVDPEALRRHISVSARHNTLDKSKRAPNQPTYQRGRERRARDAGEEDAECAGAGRRAEGPIPCEQCGMQLVDSRAYHGHFRRMHPDKNRTNYPSMKSPCMCEVCGRMFQSYTHLKDHRWVHTGERPFSCDACGKSFRMKQRLVAHRKVHSAEKATYACALCGKHFSTHSNRQRHMFIHTGLKPFKCEMCGKGFKRASEKRAHVTYVHLKKPWPKRSRGKRRQQVPMPPPPQT*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00365192;
90% Identity: iTF_00365192;
80% Identity: iTF_00364994;