Basic Information

Insect: Conogethes punctiferalis
Gene Symbol: -
Assembly: GCA_031163375.1
Location: CM062082.1:19399097-19408040[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.00071 0.056 14.6 1.8 3 23 375 395 374 395 0.98

2 14 0.014 1.1 10.5 0.3 2 20 402 420 401 422 0.93

3 14 0.02 1.6 10.0 0.3 2 20 481 499 481 501 0.94

4 14 0.02 1.6 10.0 0.3 2 20 560 578 560 580 0.94

5 14 0.02 1.6 10.0 0.3 2 20 639 657 639 659 0.94

6 14 0.0064 0.5 11.6 2.3 2 23 718 739 718 740 0.95

7 14 0.67 52 5.2 4.4 5 23 753 771 751 771 0.97

8 14 0.017 1.3 10.2 1.1 3 23 778 799 777 799 0.96

9 14 0.0045 0.35 12.1 0.1 2 23 1001 1021 1000 1021 0.97

10 14 3.6e-05 0.0028 18.6 0.7 1 20 1027 1046 1027 1049 0.91

11 14 0.00026 0.02 15.9 0.4 1 23 1057 1079 1057 1079 0.99

12 14 0.0047 0.36 12.0 7.2 1 23 1085 1107 1085 1107 0.98

13 14 5.4e-06 0.00042 21.2 1.3 1 23 1113 1137 1113 1137 0.98

14 14 0.00054 0.042 14.9 5.5 1 23 1143 1165 1143 1166 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.00071	0.056	14.6	1.8	3	23	375	395	374	395	0.98
2	14	0.014	1.1	10.5	0.3	2	20	402	420	401	422	0.93
3	14	0.02	1.6	10.0	0.3	2	20	481	499	481	501	0.94
4	14	0.02	1.6	10.0	0.3	2	20	560	578	560	580	0.94
5	14	0.02	1.6	10.0	0.3	2	20	639	657	639	659	0.94
6	14	0.0064	0.5	11.6	2.3	2	23	718	739	718	740	0.95
7	14	0.67	52	5.2	4.4	5	23	753	771	751	771	0.97
8	14	0.017	1.3	10.2	1.1	3	23	778	799	777	799	0.96
9	14	0.0045	0.35	12.1	0.1	2	23	1001	1021	1000	1021	0.97
10	14	3.6e-05	0.0028	18.6	0.7	1	20	1027	1046	1027	1049	0.91
11	14	0.00026	0.02	15.9	0.4	1	23	1057	1079	1057	1079	0.99
12	14	0.0047	0.36	12.0	7.2	1	23	1085	1107	1085	1107	0.98
13	14	5.4e-06	0.00042	21.2	1.3	1	23	1113	1137	1113	1137	0.98
14	14	0.00054	0.042	14.9	5.5	1	23	1143	1165	1143	1166	0.96

Sequence Information

Coding Sequence: ATGAACCGAACATTGGTTGAACGAGCAAAATGCATGATGCTTAATGCTGATTTATCAAAGAGTTATTGGGCTGAAGCTATAACAACTGCTGCATATATAATCAACCGCTCGCCCACACATTCTTTATCAGATATTACACCTCATGAAGTATGGACTGGACAAAAGCCGGACTTGAGCAATATCAGAATATTTGGTTGTCCTGCTATGGTGCATATACCCAAGGAAAAGCGCCAAAAATTAGATGTGAAATCTCGTCAGCTAATCTTTGTTGGGTACAGTGAATGCACAAAAGGCTACCGTTTTATAGACCCGAAAACTAATAAAGCAGTGATCAGTCGGGATGTTCATTTTCTGGAAGAaaacattaaaaATGCTGAAAGTACAGTCGAGGAAGAGCAGTCTTCTTCAAATAATTTGAGTAATAGTATCACAGATACTTCAAGTAATTCAGATTATGAAGATCCACTAGATGATACATACTTACCAAGTCAGAGTGTTGACATATCGTCTGCAAATGAAACAGGTGTTAAAACCCGTCGGCAAAGAAAATTGCAAACAAATAATGGAAGTTCATCTttatacatttgcatgaatGGTGAGTCTACTTCAAGCCTTCTTAACAATGACCCCCAGAGCTTAGAAGAAGCTCTTCAAAGTAATGAATCTGAAGAATGGAAACGGGCAATGGAAGAGGAGTATGAGTCTCTCATTCACAATAATACTTGGTCTTTAGTGGACTTACCTGGTGGGAAGAAGGCTATTCCATGCAAATGGGTTTTCAAACGAAAATTTGATCATACTGGACAAATCACTCGTTATAAGGCTAGACTTGTAATTAAGGGTTACAAGCAAAAGAAAGGAATAGATTACAATGAGATATATGCACCTGTTGTTCGATACACATCAATTAGATATCTCATAGCTATTGCTGCAAAATACAATCTTGAAATTCATCAAATGGATGCTATTACAGCATTTTTGCAAGGGGATGTTGATGAAGATATTTACATGTCTCAACCACCCAGTTTTGATCGAGGAGAGAAAGTATGCCACTTAAATAAAGCTATATATGGTCTTAAACAGGCCAGCAGACAGTGGAACAAAAAGCTCAACGCTGTCTTGTGCGAGGTGTGCGAGAAGCGTTTCGTGACCAAGCAGAAGCTGCAGGAGCACCACAACGTGCACACCGGCCGCGCGCCCGTCAAGTGCACCGTCTGCGACGACACCTTCCGCCGCTACTCCAACATGCTGGCGCACAGGTACCGCCAGACCACCGCCAGTAGTGTCACAGGCCGCAGTGCACCGTCTGCGACGACACCTTCCGCCGCTACTCCAACATGCTGGCGCACAGGTACCGCCAGACCACCGCCAGTAGTGTCACAGGCCGCAGTGCACCGTCTGCGACGACACCTTCCGCCGCTACTCCAACATGCTGGCGCACAGTGCACCGTCTGCGACGACACCTTCCGCCGCTACTCCAACATGCTGGCGCACAGGTACCGCCAGACCACCGCCAGTAGTGTCACAGGCCGCAGTGCACCGTCTGCGACGACACCTTCCGCCGCTACTCCAACATGCTGGCGCACAGGTACCGCCAGACCACCGCCAGTAGTGTCACAGGCCGCAGTGCACCGTCTGCGACGACACCTTCCGCCGCTACTCCAACATGCTGGCGCACAGTGCACCGTCTGCGACGACACCTTCCGCCGCTACTCCAACATGCTGGCGCACAGGTACCGCCAGACCACCGCCAGTAGTGTCACAGGCCGCAGTGCACCGTCTGCGACGACACCTTCCGCCGCTACTCCAACATGCTGGCGCACAGGTACCGCCAGACCACCGCCAGTAGTGTCACAGGCCGCAGTGCACCGTCTGCGACGACACCTTCCGCCGCTACTCCAACATGCTGGCGCACAGTGCACCGTCTGCGACGACACCTTCCGCCGCTACTCCAACATGCTGGCGCACAGGTACCGCCAGACCACCGCCAGTAGTGTCACAGGCCGCAGTGCACCGTCTGCGACGACACCTTCCGCCGCTACTCCAACATGCTGGCGCACAGGTACCGCCAGACCACCGCCAGTAGTGTCACAGGCCGCAGTGCACCGTCTGCGACGACACCTTCCGCCGCTACTCCAACATGCTGGCGCACAGTGCACCGTCTGCGACGACACCTTCCGCCGCTACTCCAACATGCTGGCGCACAGGGACCGGCACCACTTCCAGAAGAAGGCGAAGGTGCGCGACTACGTGTGCCACTGCGGCGAGGTGTTCCACTCGCGGGCCAAGCTGCACTGGCACAAGGAGACGCACGACGACAAACCCAAGGCGTGCCTGTACTGCAGCGACAAGTTCGTGCACGCGGCGTCGCTTACGCGGCACGTGCGCCGCACACACAACATGTACTACCTGTCGGAGCGCGCCAAGCCCAAGGAGAACGTGCCCTGCCCCGTCTGCAAGCAGGTCCGTCCGTACGCATACTGCGTCACTAGCCAGCCCATGTACTACCTGTCGGAGCGCGCCAAGCCCAAGGAGAACGTGCCCTGCCCCGTCTGCAAGCAGGTCCCCCATGTACTACCTGTCGGAGCGCGCCAAGCCCAAGGAGAACGTGCCCTGCCCCGTCTGCAAGCAGGTCCGTACGCATACTGCGTCACTAGCCAGCCCATGTACTACCTGTCGGAGCGCGCCAAGCCCAAGGAGAACGTGCCCTGCCCCGTCTGCAAGCAGGTCCGTCCGTACGCATACTGCGTCACTAGCCAGCCCATGTACTACCTGTCGGAGCGCGCCAAGCCCAAGGAGAACGTGCCCTGCCCCGTCTGCAAGCAGGTCCGTACGCATACTGCGTCACTAGCCAGCCCAGCCCATGTACTACCTGTCTCAGCGCGCCAAGCCCAAGGAGAACGTGCCCTGCCCCGTCTGCAAGCAGGTCCGTACGCATACTGCGTCACTAGCCAGCCCATGTACTACCTGTCGGAGCGCGCCAAGCCCAAGGAGAACGTGCCCTGCCCCGTCTGCAAGCAGATGTACCTACGGAGCAACCTCCGCGCCCACCTGCTGACGCACAGCGGCAAGCGGCCGTACGCGTGCGTCATCTGCAACAAGTCCTTCACCACCAAGTGGAACCTGAAGCTACACCGCTGGACGCACATGAGCAGGTCCGCGAAGCCGTTCAAGTGCAACCTCTGCAAAGGCGCGTTCATCCGCCAAGCGGAGTACATATCCCACATGAACTCTCACAAGTCCGTCCGGCCGTACACTTGCAACTACTGCGGTTGCCAGTTCATACGCAAGTACAACTGCCAGCGTCACGTCAGGGAACACCAGATGGCGAAGAAGTACGTCTGCAAAGTGCCCGAGTGCGGTAAGTCGTTCCACAGGAGCTACTACCTGTCCGAACACATGAAGGTGCACAGCGGGGCAAGGCCGTTCTCCTGCAACATATGCGGGAAGACTTCCAGCAACAAGTCGAATCACAACAAGCACCTGAAGATACATCACGCGAGGGAGCCGGTCGCTACTGAGGCGTAG
Protein Sequence: MNRTLVERAKCMMLNADLSKSYWAEAITTAAYIINRSPTHSLSDITPHEVWTGQKPDLSNIRIFGCPAMVHIPKEKRQKLDVKSRQLIFVGYSECTKGYRFIDPKTNKAVISRDVHFLEENIKNAESTVEEEQSSSNNLSNSITDTSSNSDYEDPLDDTYLPSQSVDISSANETGVKTRRQRKLQTNNGSSSLYICMNGESTSSLLNNDPQSLEEALQSNESEEWKRAMEEEYESLIHNNTWSLVDLPGGKKAIPCKWVFKRKFDHTGQITRYKARLVIKGYKQKKGIDYNEIYAPVVRYTSIRYLIAIAAKYNLEIHQMDAITAFLQGDVDEDIYMSQPPSFDRGEKVCHLNKAIYGLKQASRQWNKKLNAVLCEVCEKRFVTKQKLQEHHNVHTGRAPVKCTVCDDTFRRYSNMLAHRYRQTTASSVTGRSAPSATTPSAATPTCWRTGTARPPPVVSQAAVHRLRRHLPPLLQHAGAQCTVCDDTFRRYSNMLAHRYRQTTASSVTGRSAPSATTPSAATPTCWRTGTARPPPVVSQAAVHRLRRHLPPLLQHAGAQCTVCDDTFRRYSNMLAHRYRQTTASSVTGRSAPSATTPSAATPTCWRTGTARPPPVVSQAAVHRLRRHLPPLLQHAGAQCTVCDDTFRRYSNMLAHRYRQTTASSVTGRSAPSATTPSAATPTCWRTGTARPPPVVSQAAVHRLRRHLPPLLQHAGAQCTVCDDTFRRYSNMLAHRDRHHFQKKAKVRDYVCHCGEVFHSRAKLHWHKETHDDKPKACLYCSDKFVHAASLTRHVRRTHNMYYLSERAKPKENVPCPVCKQVRPYAYCVTSQPMYYLSERAKPKENVPCPVCKQVPHVLPVGARQAQGERALPRLQAGPYAYCVTSQPMYYLSERAKPKENVPCPVCKQVRPYAYCVTSQPMYYLSERAKPKENVPCPVCKQVRTHTASLASPAHVLPVSARQAQGERALPRLQAGPYAYCVTSQPMYYLSERAKPKENVPCPVCKQMYLRSNLRAHLLTHSGKRPYACVICNKSFTTKWNLKLHRWTHMSRSAKPFKCNLCKGAFIRQAEYISHMNSHKSVRPYTCNYCGCQFIRKYNCQRHVREHQMAKKYVCKVPECGKSFHRSYYLSEHMKVHSGARPFSCNICGKTSSNKSNHNKHLKIHHAREPVATEA*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -