Cpun023684.1
Basic Information
- Insect
- Conogethes punctiferalis
- Gene Symbol
- ZFX
- Assembly
- GCA_031163375.1
- Location
- CM062105.1:1116592-1121455[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 0.0026 0.2 12.8 0.2 2 21 117 136 116 137 0.94 2 19 0.31 24 6.2 0.9 3 23 143 163 142 163 0.96 3 19 0.028 2.2 9.5 0.1 1 23 168 191 168 191 0.94 4 19 0.0014 0.11 13.7 1.5 1 23 196 218 196 218 0.96 5 19 0.38 30 6.0 6.7 1 21 221 241 221 242 0.92 6 19 0.024 1.8 9.8 0.7 1 23 261 284 261 284 0.95 7 19 0.0012 0.094 13.8 2.1 1 23 290 312 290 312 0.97 8 19 6.6 5.2e+02 2.1 0.5 6 23 323 340 321 340 0.89 9 19 2.5 1.9e+02 3.4 0.4 1 23 346 369 346 369 0.73 10 19 0.00015 0.012 16.7 2.2 2 20 497 515 496 517 0.92 11 19 0.27 21 6.4 0.0 3 23 524 545 523 545 0.95 12 19 0.061 4.8 8.5 0.1 2 23 551 573 550 573 0.95 13 19 3.7e-05 0.0029 18.6 0.1 2 23 579 600 578 600 0.96 14 19 6.2 4.8e+02 2.2 5.5 2 21 604 623 604 624 0.90 15 19 0.00025 0.019 16.0 0.3 1 23 650 673 650 673 0.95 16 19 0.00035 0.028 15.5 0.5 1 23 679 701 679 701 0.95 17 19 0.042 3.3 9.0 0.2 1 23 707 729 707 729 0.98 18 19 0.13 9.9 7.5 0.8 1 23 735 758 735 758 0.83 19 19 0.0079 0.62 11.3 3.8 3 23 766 787 764 787 0.95
Sequence Information
- Coding Sequence
- ATGAAAGCGTCGTTTCAGGTCGAGGAAGACGTCGGCCTGCCCCTCGGGCTCTGCCGGGACTGCGCGGAGAGCGCCCTGGCAGCAATTAACTTCAGACAGGCCTGCAAAGACTCGCTGCAGCAGTGGACAGAGGCAGCAACCTTTCTGGCCTCCGTAGTGCCGCCGCAGCAGAAAGATAAAGCCTATTACATCTTCTACAATGTGGAGAACAAAATTATTGTGAGCGATCAGGCTGCCAAAGCCGATGATAAGCAGAAAGCTCTAGCGCGGCTTAATGCGAGGTTTCAAGAAGAGCGTGTAGATGAAGTTGTTGAACATAAGAAGATTAGGAGAACCAAGGTGTCATGGTATTGTCCGGATTGCAACAAAAAGTTCCTTACGCCGCAGTATTTGAATTTGCATCTTCGGAACACGTCCAAAAGGGCTTGTGAGAATTGCGGCTTGGTTGTAAAGAAGGCTAAGCTGCATCAGCATTTGAGAAGCATGCACGGGAGAATGGTTTATTCATGCAGCTTGTGTCAGGAGATTTACGACGACAGGTTATCCCTAGAGACGCATTTAGAATTAGCTCACGGGCCGAATACGCACCAGTGCAAGATTTGCGGATGCGGTTTCACCAACGAGAGAGCATTGGGCGCTCACACTTACGTGCATTCTTTGTTTCTCTGTAACCATTGCGGGGCTTGCTTCGAGAACAAGAAGTGTTATTTGTACCATCAGAAGCAGTGTAAACAGTCTGCCAATTCTGTGGTTGCTAAAAGTGATCCTCAGCACAACAAGTACGTTTGCGATCATTGTGGGAACTGGTATACGAAGAAACCTTCGTTACGTGTGCATATAATTCAGAAGCACTTGAACGTTCTGCCACACGTGTGTGCTACGTGCGGTAAGCGTACTTCGACGATTGCTCATCTGAGGTCTCACGAGAAGGTGCATTTGTTGGAACGGAAGATCATCCAGTGTTTTTGTGGTGCTAAAATGAGGACGCAGTTGGGCTATCAGCTGCATATGCGCATACATTCGGGTGAAAAGCCGTATCAGTGTGAGGAGTGTGGTGATAAGTTTCTGTCCGCTTCTAGGAGGCTGGATCATGTTAAGAGGAGGCACAGGAGCGCTAAGGAGATGCCGCACGGCTGTACAGAGTGTCCCGCCAGATTTATCGACGAGGAACCGCACATTCCGGCAGGCGCGTGCGCCGCCTGCGTATCGGCAGCGCTAGCCGCCCAAGAGTTCCGCATACTCACACAGAACTCCCAAAAGATATGGCTGAAAGCCGTCAACAACTTGACCGACATACCGTCTTCTTCAGCGTCAGGCGTGAAATCCCTATGCGCTTTCATCAAACCAGACACAATTGCCATGCACGTTGTCAAAGACTACACAGGCGGCGACAGCAAAACTGTCTTGAGCAGACTTAAGAACCGCCTGACTAAGAAAAAGCCGGTCGCAGACAAAAAACCGCGAATGACCCGCGCTGGGCCGACCTGCGATTGTCCTGACTGCGGCAAAACCTTCTACAGCCCTTACTATCTTTGTCTGCACTTGAGCAACAGCGGGCAGAAGGAAGCGTGTCCAATATGCGGCGTTGTCGTCATCAGAGGCGGCGCTATGAAGGAGCACCTGTCTAGAATACACGGCGAGACCGTGGTGCCTTGTAAGCAATGCCCGTTGTTGTTCACAAGCGAGCCGAGATTGGAGAAACACGCGAAGAAGGCTCACAGAGCCGGCTCCTTGACGTGTTCCGACTGCGGACGTACATTCCCGAGATTGGCGACGTTTGAGGCTCACGCGCAAATGCACGCGGTCAGGACTTGCAGAGCGTGCGGTAGACAGTTCACAAATCGCTGCTGTTACAGGGAGCATCGGTCGAAGTGCGAGCCGGACGCGCGGCCAGCCACTCAGTCGTTGCCTAGAAACAAGCGCTCCAACATAAGAGATCCGGCCACGTTTACCTGTGATTACTGCGGAAAGACTTACCTATCTAGGCCTCAGTTGAAGAACCATATAATCTGGATACATATGGACGTCAGGCCTCATCAGTGCCAGTGGTGTGGGAAGCGGTTCTACACGCCAGCGCGTCTAGCCGAACATACCGTAGTGCATACTAGAGAGAGGAACTTTGAGTGTGATATTTGCGGAGCGAAATTGGTGTCGCGAATGGCGATGGTGTACCATAAGCGTAGGCATACGGGCGAGAAGCCGTATACATGTGAGGATTGCGGGGAGAAGTTTCTGTCGTCTTCTAGAAGGTCTGAGCACGCGAAGAGGAGACACGGCAAGGGCCCGCTGATGCACTGTCAGCATTGTCCGGCTATATTCGCTAGGGGGCACGAATTGAGGAAGCATATGGAGAAGTCGCATCGAGCTTGGACTGAGAATGAAGTTGTTGAGGTGGAGGTGAAGCGGTCAAAGGTTGATCCGGATATGGTGGTCGTTTTGGATAAGGCGTGCTCTCGAGCGCTCGGTGATGACGGCAGCGGCCCTGGGTTGGGTGTGGTGGTTAGTGTGGATAAGTCGTATCCGCCGGCGAAAGGGCAAAGGCCTACGTTGGGGAAGGTGACGGAAGTAGCGGAAACCTTTGATGAGACCAATATGAAAGAGCTTATTGAGGTGGAATGGAAGCCGAGTGGTGATACTCCAATAGTTAAGACATTGTGA
- Protein Sequence
- MKASFQVEEDVGLPLGLCRDCAESALAAINFRQACKDSLQQWTEAATFLASVVPPQQKDKAYYIFYNVENKIIVSDQAAKADDKQKALARLNARFQEERVDEVVEHKKIRRTKVSWYCPDCNKKFLTPQYLNLHLRNTSKRACENCGLVVKKAKLHQHLRSMHGRMVYSCSLCQEIYDDRLSLETHLELAHGPNTHQCKICGCGFTNERALGAHTYVHSLFLCNHCGACFENKKCYLYHQKQCKQSANSVVAKSDPQHNKYVCDHCGNWYTKKPSLRVHIIQKHLNVLPHVCATCGKRTSTIAHLRSHEKVHLLERKIIQCFCGAKMRTQLGYQLHMRIHSGEKPYQCEECGDKFLSASRRLDHVKRRHRSAKEMPHGCTECPARFIDEEPHIPAGACAACVSAALAAQEFRILTQNSQKIWLKAVNNLTDIPSSSASGVKSLCAFIKPDTIAMHVVKDYTGGDSKTVLSRLKNRLTKKKPVADKKPRMTRAGPTCDCPDCGKTFYSPYYLCLHLSNSGQKEACPICGVVVIRGGAMKEHLSRIHGETVVPCKQCPLLFTSEPRLEKHAKKAHRAGSLTCSDCGRTFPRLATFEAHAQMHAVRTCRACGRQFTNRCCYREHRSKCEPDARPATQSLPRNKRSNIRDPATFTCDYCGKTYLSRPQLKNHIIWIHMDVRPHQCQWCGKRFYTPARLAEHTVVHTRERNFECDICGAKLVSRMAMVYHKRRHTGEKPYTCEDCGEKFLSSSRRSEHAKRRHGKGPLMHCQHCPAIFARGHELRKHMEKSHRAWTENEVVEVEVKRSKVDPDMVVVLDKACSRALGDDGSGPGLGVVVSVDKSYPPAKGQRPTLGKVTEVAETFDETNMKELIEVEWKPSGDTPIVKTL*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -