Cpun025258.1
Basic Information
- Insect
- Conogethes punctiferalis
- Gene Symbol
- -
- Assembly
- GCA_031163375.1
- Location
- JAVAXP010000036.1:790553-791905[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.9e-07 0.00018 21.8 0.0 4 38 17 51 15 53 0.95
Sequence Information
- Coding Sequence
- ATGCCGAGAAGTAAAGAGAAGAAGAAAAGGACACCTATTAATATGGCTGATTTGACAAATGCCATTACAATGATTAAGGAGAAAAAATTCTCTACTTTCGGTGCTTCCAAACATTTTGGATTACCAAGAACAACTTTGCGTCGTCATTTAAAACACTGCTCGGAAATAGATAAGGATGTAAGCAAGTTACACGAAAACCTTGCAGTTAATCAAGTTTTTGATCGCACCGAAGAGCATAGTCTGGTTGACTATATTAAAGACGCAGCCCACTTGCAATTTGGATTGACGCTAAAAGACGTGAAAATACTTGCGTACCAATTTGCTAAAGCGAATGGAAAAAAGTACCCAAAGAGTTGGGATACAAACAAAATGGCTGGAGATTATTGGCTGCGATTATTTAGGAAGCGGTACCAAAATGAATTGTCTTTGAGAAAGCCTGAAGCTACTAGCTTGGCTCGCTCTTCGGCGTTTAATAAACATACTGTGAGTTTAACAtttgacaattttaagaaaGTCCTTTCTCAATGTCCCTCTGACATAAATGCGACTGAAATCTGGAATTTAGACGAAACTGGATTGTCTACTGTCCATGTTCCTCCAAAGATATTAGCACCTCTTGGTGTAAAACAAATTGGGTCAATGACTAGCGCTGAAAGAGGAACGACGGTTACAATGATAGCCGCTATAAATGCAGGTGGTGGTTTTATTCCACCCATGCTGATATTCCCTCGTGTAAACTTTAAAGATTTTATGATAACTGGAGCTCCTGAAGGCAGTATTGGAGGCGCCAATCCATCCGGTTGGTCAAACGAGTCTATGTTTGTGATATTTCTCCAGCATTTTATCAAATATGCAAAGCCTACCAAAGAACGACCTGTCATTCTCATAATGGACAATCATGAAAGTCACATTTCAGTACAGGCAATACAAATGGCCAAAGACAATGGTGTAAAGCTTATTATACTATCTACTCTTCATCCACATACTAGTAATAATATGCAACCACTAGACAAGTCAGTTTTCGGACCTTTCAAGACTTATTTTAATACAGCGGCTAATGAGTTACTAATGACTCCAGGACATGTGGGAAAACCATTAACTATATATGATATTGCTGGCTTGGTGGGAAAAGCTTTTCCTCTTGCCTTCACACCAAACAATATTTGCAAAGGTTTTAATTCAACTGGTTTCCATCCTTTAAATGAAAACATCTACACTGACGCTGATTTTATGCCCGCATCCTATTCTGATCGTCCACTTATCGAAAAATCACCTACCAGAATTGATGAGGTGGCTATTAGTCAGCCGACTGCTTCCGGTTTCGAAATTATAGACGGAAACCGCCAACTTTGA
- Protein Sequence
- MPRSKEKKKRTPINMADLTNAITMIKEKKFSTFGASKHFGLPRTTLRRHLKHCSEIDKDVSKLHENLAVNQVFDRTEEHSLVDYIKDAAHLQFGLTLKDVKILAYQFAKANGKKYPKSWDTNKMAGDYWLRLFRKRYQNELSLRKPEATSLARSSAFNKHTVSLTFDNFKKVLSQCPSDINATEIWNLDETGLSTVHVPPKILAPLGVKQIGSMTSAERGTTVTMIAAINAGGGFIPPMLIFPRVNFKDFMITGAPEGSIGGANPSGWSNESMFVIFLQHFIKYAKPTKERPVILIMDNHESHISVQAIQMAKDNGVKLIILSTLHPHTSNNMQPLDKSVFGPFKTYFNTAANELLMTPGHVGKPLTIYDIAGLVGKAFPLAFTPNNICKGFNSTGFHPLNENIYTDADFMPASYSDRPLIEKSPTRIDEVAISQPTASGFEIIDGNRQL*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00428048; iTF_00858487; iTF_01172304; iTF_00179261; iTF_00179267; iTF_01012217; iTF_01012218; iTF_01012219; iTF_00636350;
- 90% Identity
- iTF_00428048; iTF_01172304; iTF_00179261; iTF_00179267; iTF_01012217; iTF_01012218; iTF_01012219;
- 80% Identity
- -