Cpun020585.2
Basic Information
- Insect
- Conogethes punctiferalis
- Gene Symbol
- clz9
- Assembly
- GCA_031163375.1
- Location
- CM062099.1:3978061-3992293[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9.9e-08 9.6e-05 22.7 0.0 1 36 8 43 8 49 0.85 2 2 0.31 3e+02 1.9 0.0 19 29 1250 1260 1250 1263 0.86
Sequence Information
- Coding Sequence
- ATGGCACCAAAGAAAAACTACACCCCCGAACAAATGGGGAGGGCATTAGATGCTGTAAGGATGGGAGAAAAAATAAGCACAGCTGCCGTCCGGTTTGGGGTCCCTCGAATAACTTTGTACAACAAAGTCACAGGCAAAAGTCCTGCAGTTTGTGCTATGGGGCCCCAAACTATACTCACCGCAGAGGAAGAGGCCATTCTGGTAAAATGGTTGGTGGCAATGGGTGAAAAACACTTTCCCATTAATAGGCAGTTATTGACAGAGAGCGTGCAAAAAATTATGTTGGATCAAGGGAAGGCCAATCCTTTTACAAATAACAAACCTGGAAAAAAGTGGTTTTCATCATTTTTAAAACGACATCCAGATATAACAGAAAAAACAGCACAAAATCTTTCGAAATCTAGGGATGACGTTACCGAAGAAGGCATCCGTAGATGGTTCGATGAAATAACGACATACATAGAAGGTATAGGTTTAAAAGATGTTTTGGATGAACCCAGCCGGATATTTAATACCGACGAAAGCGCATTTTTTTTGTCACCCAAAGCAGGTCGAGTTCTTTGTAAACAAGGAGAAAAACATCTTTACCAGTTCTGCGGTGATGAAAAAGACAACCTAACTGTCTTACTCACTGCCAATGCCACCGGTCAATTAGCACCACCAATGATAGTGTTCAAATATGAAAGATTGCCAGCGCACATAACAGCCACTGTTCCTGAGAATTGGGGCATAGGAAAATCGGAATCAGGGTGGATGTGTGGAAGcacattctacgagtatatggcAAATATTTTCAATCCATGGCTGGAGGAGCAAAATATACCAAAACCCGTTCTGTTTTTTTTAGATGGCCACAGATCACATTTAACATTACATCTATCAGAGTTTTGCTCCGCAAACGGCATAGAGCTCATTGCTCTGTACCCCAACTCAACCCATATCCTTCAACCAATGGATTTAGCAGTCTTCCGCCCTTTGAAAGTTGCCTGGAAGAAAGAAGTCTCAAAATGGCAGCTgaataatttaggtaaagtcCTGAAAAAAGATTCATTTGCTCCAGTGCTAAAAGACGCTATTGCCTCACTATCAGAAGAAAGTATTCGGAATGGGTTCAGAGCTGGAGGTTTACATCCTTTCGGACCGGACTACATTGATatgagtaaaataaaaaaaaatcacacacaAATTATTGAAAAGGGAGTGGACccaaaaaaaatagaatttgtGAAATACTTGGAAGCTGAAATAGTAGCTGTTTATTCGAGACAAAAGTTAGACTTGCTCAACACATTATATCTCAAAGACAGGAGCACCGTTGAACAGAATATACCAAGTGAAGATGAATCGCTGTTTGTTATCTGGGCCAAAAACAAACAAGAGTCATTTAATAGTGAAAGGTCTATTCCCCAAATAGATTTAGTACAGACTCAGCCCTCTACATTAGAAGCTGCTCCAGATAGCACAGAAAGTGAAGTGCAACATGCAAATTCGACGGCTATTTTAACCACGGAGGGTTCACTGCTATTGGAATCTCAGAAAACATCATCCCTCAAATCACTGGAATGCACTGAAATTGAACCATGTCGAGATTCTTTAGCTTCACCTACAATAATGGAATTACCTGACCAAATGGAGGAACCGCAACATGAGCAGATAAACCGAATTAGTGTTGAAAATCAAGGATTATCCTGTAGTAGACCAAATACGCAGACTAAAACATTCCCAACAAATGAAACACTCGAAAATCAAATACCGGAAATGGACCCAAGGACAAATAACACAGAAGGCCCATCAGCAACACCCGAGAGTGCGCCAGAGACTACTGCCAGAGTCCCTTTACCTAGTGAAACTCCTCAAAAACATCCTTTAGAAGCTGCTTTAGGCGTAATGGTTCCATCACCTTTTAAGAAAAGCCTCTTTTGGCCCGAAGAGGAACcgaaggaaaaaaaaaagaaaaaagagaaGATACCATTTGCAGTGACCAGTAAATCTTGGCAAGAATATCacagaaaaaaagaaatagaaaaacaaaatctacaaaaagaaaaagaaaagagagCCCTAGAAagacagcaaaaaaaaatattaaaagaaaaaggtATTGCTgagaaaaaaggaaaatctaAATCTAAACCGAAGACTAAACATCGTGAGGACACTTCGTCTGAAGACACAGATGCAGAGATTGTATACGCTGAAAGTGATGATAGTGTTTCAAGTAATTCTGCCATAAGTAGAGAAAACCCTCAGGATCCACAACCATCAAAGAGGCGCAAAATCCCCATTACGAAGCAAGGCATAAAAACTTCTAAACGTCCTCGAAAAAATCTGGAATGCAATAATACTGATTCTGATGATGAACCTTTAAGCAGCTTAACAACAAATACAAACTCTGGTCTAGTAGTTGCTAAAGGGCAATATGTCATAGTCAAGTATGAGGGTGAATATTTCCCTGGAAAAACTGAAGACGTCGACCGTAACCAGTATGAAGACCGCAACACGTGCGCAGGTCTCGACGGGGCTGTGGACGCGCTTCTCCGCGCTGCCGGCACGCTTCGGTACATCCACGAGAACTTCACTAACGCGCCGTCCGTCGACCTCGCTGCCGACACGCTTCTGGTACTCGGCGCTCTGATGACGGCTCAAGCCCGGGAATGCCTGTTCGAGAAGCTGCAGCTGCAGGCTCGCGAGGCGTGCGGCCGTGACCGGGAGCTTCGGGATGACCTGGATATGTGTCTGGACCTGGCGCAGGAGAGCGCCCAGCTGGCGCATACCTACCGGCAGCTGTATGAGAAGATGCAATCAGAGGGTGTGTTCAATTACGTGCCATACTCGTGGGTTTCACTAGTCCACGTCAAGACTGAGTATTATAAAGCGTTGGCACACCAGTTCTGCGCGACGGGACTCCTGAATGCTCCCTCGGGGGTGCGCGCTCGGGACCGACTAGCAGCGCTCTATTCGCCTTCCGGAGACAGGAACGTTGACAATGGATCAGCGTTGTCGCCATCTTTGAAAGACCATGAGCTGGACCACATGGCTCTAGGAAGGGCTCACTTGGCTGAAGCGTTAGCGCTGTACGAAGAAGCCCTCAGGCTACAAAGGATGTGTCGGGAGCTCCGGGGTAAGGAGGCGTTGTCGAGGGCCGTCCGCGCGGCGCTGGAGCGCGCCGCGTCTGCGCGTGCGCTGGACGCGCGCGAGCCGGACTTCGCGGACCTGATCGACGCACCGCACATATTGCCCTCATCGAAGTTCCAACTCGCACTGACCCCACCAGACTTCGCTCAGCATAGGGTCGATGACCTGTTCAGGTCCCTCGGGCCCATCGCGGTGTTCTCAGCCAAGAGGCACTGGAGCGCCCCCCGGCTGGTGCAGCTGCAGAAACAGCATAGGGAGGGCGCCAGAAGGATCAAGAACGGGCAGGATGCTGATGATAAGATCAAAAGAAACGAAAAGAGAGACAGATCAGAAGATAACAGCACGTACTACAACCAAATAATTAGAAGCGACGAGAAGTATACAGAAGAATACGACAAGAAGAAACTGCACAGAGTCACGAAGCAGAACGGCGTTTACATAAACAGTTACAATAACAACAATTACGAATATCATCCAAAGGTGTTGGATTACGAGTCCAGTTATAGGAACAAGGTTAATGAAAGCTTTGTCAAGACTACAACGGATAATGGGATCACTAAGGTCGGAGAGCATGTGAACGGCAAAGCCAAGCGCGAGAGACGTAAGGGGGACCTGCGGAGGGCGGCCAGCGAGTACAACGTGTCCTCGAAGAGTGACGAGGAAGGGTTCGGGTTCTCAGTCCGGGGCGACGCGCCTGTCGTCATAGCAGCCGTAGAACCCAACTCACTGGCTGATATCGGCGGTATGCGAGAAGGGGATTTCATCATCACAATAGGAGAGAAAGACGTCAAGTGGAGCTCCCACGAGGAGGTGGTCCACCTGATCCAACAGACTGGCGACACGCTAACCATGCGGCTGGCGACGCCGATGGACAAGAGTTTACTAAAGGTATGTAAGGCGGTGGCGTAG
- Protein Sequence
- MAPKKNYTPEQMGRALDAVRMGEKISTAAVRFGVPRITLYNKVTGKSPAVCAMGPQTILTAEEEAILVKWLVAMGEKHFPINRQLLTESVQKIMLDQGKANPFTNNKPGKKWFSSFLKRHPDITEKTAQNLSKSRDDVTEEGIRRWFDEITTYIEGIGLKDVLDEPSRIFNTDESAFFLSPKAGRVLCKQGEKHLYQFCGDEKDNLTVLLTANATGQLAPPMIVFKYERLPAHITATVPENWGIGKSESGWMCGSTFYEYMANIFNPWLEEQNIPKPVLFFLDGHRSHLTLHLSEFCSANGIELIALYPNSTHILQPMDLAVFRPLKVAWKKEVSKWQLNNLGKVLKKDSFAPVLKDAIASLSEESIRNGFRAGGLHPFGPDYIDMSKIKKNHTQIIEKGVDPKKIEFVKYLEAEIVAVYSRQKLDLLNTLYLKDRSTVEQNIPSEDESLFVIWAKNKQESFNSERSIPQIDLVQTQPSTLEAAPDSTESEVQHANSTAILTTEGSLLLESQKTSSLKSLECTEIEPCRDSLASPTIMELPDQMEEPQHEQINRISVENQGLSCSRPNTQTKTFPTNETLENQIPEMDPRTNNTEGPSATPESAPETTARVPLPSETPQKHPLEAALGVMVPSPFKKSLFWPEEEPKEKKKKKEKIPFAVTSKSWQEYHRKKEIEKQNLQKEKEKRALERQQKKILKEKGIAEKKGKSKSKPKTKHREDTSSEDTDAEIVYAESDDSVSSNSAISRENPQDPQPSKRRKIPITKQGIKTSKRPRKNLECNNTDSDDEPLSSLTTNTNSGLVVAKGQYVIVKYEGEYFPGKTEDVDRNQYEDRNTCAGLDGAVDALLRAAGTLRYIHENFTNAPSVDLAADTLLVLGALMTAQARECLFEKLQLQAREACGRDRELRDDLDMCLDLAQESAQLAHTYRQLYEKMQSEGVFNYVPYSWVSLVHVKTEYYKALAHQFCATGLLNAPSGVRARDRLAALYSPSGDRNVDNGSALSPSLKDHELDHMALGRAHLAEALALYEEALRLQRMCRELRGKEALSRAVRAALERAASARALDAREPDFADLIDAPHILPSSKFQLALTPPDFAQHRVDDLFRSLGPIAVFSAKRHWSAPRLVQLQKQHREGARRIKNGQDADDKIKRNEKRDRSEDNSTYYNQIIRSDEKYTEEYDKKKLHRVTKQNGVYINSYNNNNYEYHPKVLDYESSYRNKVNESFVKTTTDNGITKVGEHVNGKAKRERRKGDLRRAASEYNVSSKSDEEGFGFSVRGDAPVVIAAVEPNSLADIGGMREGDFIITIGEKDVKWSSHEEVVHLIQQTGDTLTMRLATPMDKSLLKVCKAVA*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -