Basic Information

Gene Symbol
Arid4b
Assembly
GCA_031163375.1
Location
CM062093.1:6604088-6628159[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 3.7e-30 1.5e-26 93.2 0.1 1 89 286 372 286 372 0.96

Sequence Information

Coding Sequence
ATGTTGTTCGTCCAAAGCACTCAGGGGGACGACCCTCCTTTCTTGCCAGTTGGGACTGATGTCAGTGCCAAGTATAAAGGTGCATTTTGTGAGGCTAAGATAAAGAAAGTTGTTCGTAATATTAAGTGTAAGGTGACTTTAAAAGCTGGTGGCGGTACATTGACTGTAAATGATGATGTCATCAAAGGCACCCTCAGAGTAGGTAGCACGGTGGAGGTGAAGCAGGACCCCAAAAAGGATGCAATGGAGGCTGTTATCACCAAAATACAAGATTGTAGCCAGTACACTGTTGTATTTGACGACGGAGACATCACGACGCTACGACGGTCTGCGCTTTGTCTCAAGAGTGGGCGGCATTTCAACGAAAGCGAAACGTTGGACCAGTTACCTCTCACACATCCTGAGCACTTCTCAACACCTGTCATAGCGGGCCGCCGTGGTCGGAGGGGGCGCGCTCAGTCGGAGGAGAGCGagggcgagggcggcgcgcggcgcgcggcggcggacAGCGAGCCGCACGCGGGCCGCGTGGTGCTGGTggaggcggcgggcggcgcggagcGGCGGCGGCCGCACCAGCCGGCCTTCCCCGCGCTCGTGGTCGCGCCCACCGCGCAGATCAAGGTCAAGGAGGACTACCTCGTGCGCTCCTTCAAGGATGGCAGATATTACACAGTGCCGAAGAAGGAGGCGCGCGAGTTCCGCAAGGGCAGCGCGCCGCTGGAGTGGGCGGGCGTGGAGGCGGCGCTGCAGTACCTCAACAACGGCGTGCTGCCGCCGCACTGGGACCGCGACACGCTCTTCAACGAGCCGAGGAACACCTCCGACGACAGCTCAGATGATGAGCCACGTGAAGAAAAGGACCACTTCGTCGCACAACTTTACAAGTTTATGGATGACCGCGGTACGCCTCTAAACCGAAACCCGACTATAGCCAACAGAGACATCGATTTGTATAGGCTATTCAGGGTTGTCCAGAAACTCGGAGGTTACAACAGGGTGACAAATCAAAATCAATGGAAAACAATTGCTGATAAAATGGGCTTCCATCCGGTCACAACAAGCATTACCAATCTATGCAAACAAGCATATAAAAAATTCCTGCACAGCTTCGAAGACTTCTACCGCAAACTGGGCGTGACTCTGGTGGCGCATCCCCGCGGCGCCCGCACGCCGCCCGCCGGCCGCTCGCTCATCCGCGACCGCGACAAGCAGCCGCCCACCTCCTCCTCCGCCTCCTCCACGCCCACCGGCACGCCCACACAGCAACGGGGCAAAGATAAAGACTCTGACAAGAGCGAGACAGAAAAGAGCGATAAGAGCGAAAAAGAAGACAAAGTAGAGAAGGTCGAGAAGGAGAAACCGCTAAAAGAGAAACCTCGAGCCAGCGACGGCGAGGACAGTGCCGACAACCAACCGCTCATCACCACTACACCAAAaatagaaaaagaaaaggaAAAAGACAAAGAGAAAGAAAAGGAGAAGGAGAAAGAaaaggaaaaagaaaaagagaaggaAAGGGAGAAAGAGAAGGAAAGGGAGAAGGAGAAAGAGAAGGAAAAAGAAAAGGAGAGAGAGAGGGAGAAGAGTGCCGCGCCGAGCGAGGAGAAGGCGAGCGTGCTGAAGCCGCGCTCGCAGTCCAAGACGCGCAGCGGGCCGCCGGCCAAGCCCGACCACGACAAGAGGACGCCCAAGAGGCGACCACTCTCCTCTAAAAGTGAGAGTGCGGGCGCGAGCGTGTCGCGGGCGTCCCGGCGGCCGCACGTGTCCACGGACAGCGACAGCTCCGGTCGCGCCTCCAGATGCGGTCCGACAAAGAAAATGCAGAGTCGCCGCAGTCAGAGTGCCAACTCTGCAAGCAGCGGGAACACCATCGCGTCCAACAGCAGTAAGCGCCcgcgaaaaagaaaaaatactgaaCCTTCGGGTAACGACTCTACGCGCGCCGGCGGAGCTAACGTGAAGGCACAAGTGGGAGATAAGCTCAAAGTTTACTACGGACCTACACAGTCGGAATCAAAgGTGACGTACGAGGCGAAGGTGATCGAGGTGTCGGCGGAGGGCATGCTGCGCGTGCACTACACGGGCTGGAACACGCGCTACGACGAGTGGATCAAGCCGCAGCGGATCGCGCTCAACGTCACGCAGCACGACGCGCGCAACAAGAAGGCCAGGAATTCCAGCATGGCCAGACGTGTGAGATCTAAAAGAACTGAAGAGTCTTCAGCGCGCTCCGACTCTGACAGCGATTCGGATAGCGACGATGACGTCAAGCGATCGCCAAAGAAGTCCGATGACAAAGGTAGTTCAAAGACTCCTTCACGGTCGAAAGATGCAAAGTCGAGCGACAGCAGCAGTTCAAGCAAACCTCGCAAGAGGCCGGTGAGGACTGTCTCGACGCCCACCGCGGCCTCGCCCGCGAAGAGGCCCCGGCCGGCCGTCAGCCACCAGGGCCGCGACTACGACCTCAACGAGATCCGCTCCGAGCTGAAGGGGCTCCACACCGTCAAGCAGGAGCCGGAGGAGCCCAAGCCGGAGCCCGCGGACAAGGACTCGCTCGCCCCCGCGCCAGCATCCGGCCCCCCGTCAGAACCCCCGCAACCTGACAAACAACCTGAGGACGTTTACGAGTTCAAAGAGCCCGAACCGTTCGAACTCGAGCTGCACGATGAGAAGAAGAAACGAACCCATCGCATCTTCGATGACATATCTCCAAGCAAATACACATCTACGCTATCCAAATCCCTCAGCGAGGAGATATCGGAAGACCCTCTCAGGGCGCGTCCATCGTCGCTTCGGTCGCCATCCTTGTCGCCGTTCAGAGACTTCGGATCCACTCGTGATGTGGTTGGACGACAGAGCCCCGAGGAAGACTCCAAAGATGGTCTGTTTTCCTTGGATGACGACTCTTTCCCCGGCGAGGGTAGCTCCGGGCCCATTTTCGAGGGATTCACTCCTGCTAAAAATCAGGAGACCTACTCCAAGAAGAGTAAAGTGTCAAAACTGAGGGAATTGATAGATGATTCCCCAGATAGTCCGGCGGACGACGAGCAATCTTCGGAAGACGAATCTGAAGATATACCGATAAAAGAGGAGGAGGAGGAAGAGAGGGAACCGAGCCCGGTGGCGGCTGTAATTGAACCGCCGAAGCCTCCGGAGCCTGAAGTGCAGCCCGAGGTTAAGGAGCCCGAGCTTGTTCCGATAAAGGAGGAAAAGAAGGAACCGGTCACTCCGCCACCAGAAGAAGTGAAAGAAGACATTCCGGAGCCTCCAAAAACTCCGCCACCGCCGCCGCAGAGAAAGCTGGAGTTACCCAGCATCAATATAGTACCGGTTATAGATGTAGAACCAGTCCTTAAGAAACCTGAACCTAAACCCGCTAAAGAAGATAAACAAGAACTGACTGAGGAACCTCAAAAAGAACCACCTATCCCAACCGAAGATCCAATTAAACTGCTCTCAATACCACTGCCCCTTGTCGAGCCTAAAGAAAATGTTCTTAAAGTAAATGTTGAAAAGAACATGGTTGAGCCCGAGCCGATAGTTATATCTAAAATGGAGCCTCCTTCGAGCCCCCTCGTAGACACAGAAGAAGATAAATCTGAGCCGGATAGTCCCGCGCGACTAGACGTTCTTCCCGAACCGCCTCCAGGCTTCCTGCTACAATCCGAGGGCCCCAAGATAGCCGAGAAGTTACTGAAAGCGATCAACAGTGCTAAAAGACTATCTATGTCGCCGCCTCCCGTCGAAGACCGACCGTTAACACCAAAGGATACACTGAAGTTCTCTAAACCCGAAGGTAAAATATCGCCCATTGCAACGGAACTCAAAACGAGTGTCGGCAAACCGGAGCCGCTGAAGCCGTTACCTAAAACAGATCCCATTAAAAAGTTTGGTACTTCAGAGTTGACGGATTCCATATTTGGTGAGCCGTCGAACTTGACGGATGCAAAACGCGACTTGGCCGAAATAAAGAAGGTGAAGCCGAAAGAGGCAACGCCCCCGAGACTTCAGAGTCCGCTGAGCATATTGGAGAGGCGGAAGAGCGTTTGTGACTTGCCACTGAGCAATCCCGGCAAGAACAACAAAGTGCTGAGTGATACGATACAGAAGCTATCGAGTCAGATCAACCAGTCGGCCGCGACTGTCGCCGCGGTCGCCGCCAACATTCCCCTGCCGCCGTTCCCGCACGAAGACAGAAGTGAATCAAGTGACTCCGATGATTCAGATAGACGGTTAATAATCGACAAGCTATCAGTGGAGGAGTGGGGCAGCGGCGGCAGCTCGGAGGCGTCTCGCGGCGTGGCGGGCGTGGCCGGCGTGGCGGGCGTGGCCAACGTACAGGGCGTGGCCGCACCCGCCGCGCTGGCGGCCGCGCGCGCGCTGCACGCGGGCAAGTCGCCGGGCGAGTGGAGCGCCGGCGAGTCATTACTCATGCTGGAGGACGCCTGCAAGAACGAGCGCAAGCACAGTGCGAGTGTAGTTGTAGCGGGCAGCGGGCGCGTgggcagcgcgggcgcgggTGCTGCGACGGCAGGGGGCGTGGCCGGCGCAGGGGGCGTGGTCAGCGCAGGAGGCGTGGCCAGCGCAGGGGCGGGGCCCAGCGCCGAGGAGGACAGCAACATCTCGCTGCTGCTGTGCGAGGAGACCATCCCCGGCTCGCCCGCGCCCGACAGCGAGCCGGCGCCGCCGAGACAGCGGCTGCACATGCCGTTTGCATGCGCGCCGCCACACCACTCTCACTcgaaagACGAGAGGCGAGCGGAGAGTGGGTCGTCAGGTTcgcgcgcggcggccggcggcggcgggggtGGTGGTGGAGGCGCGGGGGGCGGCGCGGGGGCAGGCGCGGcggagggcgcgggcggcggcgcgggctgGGCGCGGCGCCAGGCGCTGCTCGACAACACGCCGCCCACCACGCCCGACAGCAGCCTCGACATGTCGCCGCACAGGGAACGAAGAATGTCCGAGCGAGACAGCCCTTCGGAACGCAAAGAGGACGAAGACGATAGTCGTCCTAACAACAACTCTCCTATGGAATTGGATAAACCTCACGGCGGGCGGTCGCGCAAGGCGTCGGAGAGCTCGGCGGGCGCGgggcgcacgcgcgcgcgccgctcgcgcCGCGACACGGActcgccggcgcacgcgcacgcgccgcaccacGCGCCCGCGCACACCCACGCGCTCCCGACGCCGCTCAAGTACAACTTCTACGTCGACCTCGATCCATCGTGGGATAGCCTGACACGCATCAACCTGCTGACGTCACGGCTGGCAGACCTGCGCAAGGCGTACCACTCGCAGAAGGCAGAGCTCGCTGCCATCGACCGACGCCGGAAGAAGCTTCGTCGGAAGGAGAGAGAAGCTGTGAAGGCAGCAAAAGCTGCGTGTTCATGA
Protein Sequence
MLFVQSTQGDDPPFLPVGTDVSAKYKGAFCEAKIKKVVRNIKCKVTLKAGGGTLTVNDDVIKGTLRVGSTVEVKQDPKKDAMEAVITKIQDCSQYTVVFDDGDITTLRRSALCLKSGRHFNESETLDQLPLTHPEHFSTPVIAGRRGRRGRAQSEESEGEGGARRAAADSEPHAGRVVLVEAAGGAERRRPHQPAFPALVVAPTAQIKVKEDYLVRSFKDGRYYTVPKKEAREFRKGSAPLEWAGVEAALQYLNNGVLPPHWDRDTLFNEPRNTSDDSSDDEPREEKDHFVAQLYKFMDDRGTPLNRNPTIANRDIDLYRLFRVVQKLGGYNRVTNQNQWKTIADKMGFHPVTTSITNLCKQAYKKFLHSFEDFYRKLGVTLVAHPRGARTPPAGRSLIRDRDKQPPTSSSASSTPTGTPTQQRGKDKDSDKSETEKSDKSEKEDKVEKVEKEKPLKEKPRASDGEDSADNQPLITTTPKIEKEKEKDKEKEKEKEKEKEKEKEKEREKEKEREKEKEKEKEKEREREKSAAPSEEKASVLKPRSQSKTRSGPPAKPDHDKRTPKRRPLSSKSESAGASVSRASRRPHVSTDSDSSGRASRCGPTKKMQSRRSQSANSASSGNTIASNSSKRPRKRKNTEPSGNDSTRAGGANVKAQVGDKLKVYYGPTQSESKVTYEAKVIEVSAEGMLRVHYTGWNTRYDEWIKPQRIALNVTQHDARNKKARNSSMARRVRSKRTEESSARSDSDSDSDSDDDVKRSPKKSDDKGSSKTPSRSKDAKSSDSSSSSKPRKRPVRTVSTPTAASPAKRPRPAVSHQGRDYDLNEIRSELKGLHTVKQEPEEPKPEPADKDSLAPAPASGPPSEPPQPDKQPEDVYEFKEPEPFELELHDEKKKRTHRIFDDISPSKYTSTLSKSLSEEISEDPLRARPSSLRSPSLSPFRDFGSTRDVVGRQSPEEDSKDGLFSLDDDSFPGEGSSGPIFEGFTPAKNQETYSKKSKVSKLRELIDDSPDSPADDEQSSEDESEDIPIKEEEEEEREPSPVAAVIEPPKPPEPEVQPEVKEPELVPIKEEKKEPVTPPPEEVKEDIPEPPKTPPPPPQRKLELPSINIVPVIDVEPVLKKPEPKPAKEDKQELTEEPQKEPPIPTEDPIKLLSIPLPLVEPKENVLKVNVEKNMVEPEPIVISKMEPPSSPLVDTEEDKSEPDSPARLDVLPEPPPGFLLQSEGPKIAEKLLKAINSAKRLSMSPPPVEDRPLTPKDTLKFSKPEGKISPIATELKTSVGKPEPLKPLPKTDPIKKFGTSELTDSIFGEPSNLTDAKRDLAEIKKVKPKEATPPRLQSPLSILERRKSVCDLPLSNPGKNNKVLSDTIQKLSSQINQSAATVAAVAANIPLPPFPHEDRSESSDSDDSDRRLIIDKLSVEEWGSGGSSEASRGVAGVAGVAGVANVQGVAAPAALAAARALHAGKSPGEWSAGESLLMLEDACKNERKHSASVVVAGSGRVGSAGAGAATAGGVAGAGGVVSAGGVASAGAGPSAEEDSNISLLLCEETIPGSPAPDSEPAPPRQRLHMPFACAPPHHSHSKDERRAESGSSGSRAAAGGGGGGGGGAGGGAGAGAAEGAGGGAGWARRQALLDNTPPTTPDSSLDMSPHRERRMSERDSPSERKEDEDDSRPNNNSPMELDKPHGGRSRKASESSAGAGRTRARRSRRDTDSPAHAHAPHHAPAHTHALPTPLKYNFYVDLDPSWDSLTRINLLTSRLADLRKAYHSQKAELAAIDRRRKKLRRKEREAVKAAKAACS*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00075238;
90% Identity
-
80% Identity
-