Basic Information

Gene Symbol
Xbp1
Assembly
GCA_031163375.1
Location
CM062081.1:15237061-15242962[+]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 9.4e-18 8.9e-15 55.1 11.9 2 61 43 102 43 106 0.93
2 2 0.00073 0.69 10.6 0.2 33 54 88 109 87 112 0.90

Sequence Information

Coding Sequence
ATGAGTACGCCGATTATAATCACTGTTCCCAACAACTACTTGGCGGTGGACGAGGACTCGAAGGTCGTCATGGACGTCACCACACCTCCCCCGTCAAGGAAACGGCGCCTGGATCATTTAACATGGGAAGAAAAAATGCAAAGGAAaaaactaaaGAATCGCGTGGCGGCTCAGACGTCGCGCGACAGGAAAAAGGCAAAAATGGATGAAATGGAACATAAAATAGAGCTGCTTGTCGAGTCAAACGAGCGTTTGACGAGCGAGGTAGCAAGTCTGAAGGCATTGAACGAGCGTCTGCTGAGCGAGAACGTGTCGctgcgcagcgcggcggcggcgcggcccgTCGCGGGGGCCCGGGGACCGGCAGCGTCGCCTCGGCAGAAGGGCGGGCCCCCGCCGGCGAGCCGCGCGGCGCGCCTGCTGCTGGCGATGTGCCTGCTCTCGCAGACCTCCTCGCGCACCTCGCCTCCGACGAGTACCTGGACACGCTCGACCAGCTCGCCGACTCCCTGCTCAAGGAGATTGATGCAGGTGCTGCAGGAGAGGCTGAAGATGTCCCAGACAGGATCCCTGGAGAGCGCCCTCAAGGAGCTCAAGTGGTGGGGTCCGCAGCAGAGCACCTGGAACCCAGTGAAGGTGGCGTCGTAG
Protein Sequence
MSTPIIITVPNNYLAVDEDSKVVMDVTTPPPSRKRRLDHLTWEEKMQRKKLKNRVAAQTSRDRKKAKMDEMEHKIELLVESNERLTSEVASLKALNERLLSENVSLRSAAAARPVAGARGPAASPRQKGGPPPASRAARLLLAMCLLSQTSSRTSPPTSTWTRSTSSPTPCSRRLMQVLQERLKMSQTGSLESALKELKWWGPQQSTWNPVKVAS*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01491609;
90% Identity
iTF_01071378;
80% Identity
-