Cvac004311.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Conistra vaccinii
Gene Symbol
-
Assembly
GCA_948150665.1
Location
OX411343.1:11898912-11901248[-]

Transcription Factor Domain

TF Family
zf-BED
Domain
zf-BED domain
PFAM
PF02892
TF Group
Zinc-Coordinating Group
Description
The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 0.011 11 6.7 2.6 18 43 9 31 5 32 0.93
2 20 0.0027 2.6 8.7 0.5 17 44 36 60 32 60 0.85
3 20 0.0011 1 10.0 0.1 18 43 68 90 65 91 0.87
4 20 7.4e-05 0.071 13.7 1.5 17 44 98 122 95 122 0.91
5 20 0.00048 0.45 11.1 1.2 18 44 129 152 127 152 0.94
6 20 0.00018 0.17 12.5 1.2 15 43 157 182 154 183 0.89
7 20 0.0036 3.4 8.3 0.3 17 44 188 212 184 212 0.90
8 20 0.033 32 5.2 1.3 16 43 218 242 213 243 0.83
9 20 0.086 82 3.9 0.1 18 44 254 277 245 277 0.84
10 20 0.35 3.3e+02 2.0 0.4 14 43 298 324 281 325 0.75
11 20 6.3 6e+03 -2.1 0.1 18 29 332 343 330 349 0.76
12 20 0.2 1.9e+02 2.7 0.0 15 27 358 370 354 384 0.80
13 20 0.087 83 3.9 4.4 17 43 405 428 399 429 0.90
14 20 0.69 6.5e+02 1.0 3.1 14 29 431 446 429 458 0.73
15 20 0.031 29 5.3 6.8 12 43 458 486 449 494 0.74
16 20 0.36 3.4e+02 1.9 2.8 18 44 493 516 487 516 0.84
17 20 0.55 5.2e+02 1.3 1.0 18 28 523 533 519 552 0.82
18 20 7 6.6e+03 -2.2 0.4 33 43 565 575 553 577 0.62
19 20 6.7e-05 0.064 13.8 1.9 5 43 604 641 603 642 0.85
20 20 9.5 9e+03 -2.6 0.2 13 27 687 701 679 702 0.74

Sequence Information

Coding Sequence
ATGTATCAAAATCAATTGGATTTTGTTTGCGACTACTGTTCGAGAACTTTTACAAGAAAATATAACTTACAAACTCATATAGAAAACTGTCATATCAACTCTTCATGTCACTGTAATATCTGTGGCCAGAACTTCGGCAGTCCGGCTGGATTGATACAACATTTATCCAGAGGCCATAACAACTACGGGCAGCCCTTTCCAGAATGTGAACTGTGCGGACGAATTTTCACCAGAAAACAGAATATAACATCACACATGATAACTGTACATCTACAGGGACTTGGCTACGAGATTCGTTGTCGGTTATGCGAAAAAACGTTCACTACAGAACGGAATTTGAAAAGGCATATCAATCAGTTGCATAATCCTGACGTTGAGTATCCTACGTGTAACGATTGTCACAAGGTTTTTAAAGGGAAACACTCGCTCATAGCCCATATACAGACAGTCCACAATGTGAGCGAGAGAGACGCCATCAAATGCCATTTGTGCGAAAAAGTGTACACGAATAACAGGAACTTGAAGCGGCACGTTGAAATGTTTCACGGTGTAAAAGGGGAGTTTAGATGCGACATCTGCCCAAAAGTGTACACCTCCAACCAGAGCTTGAGGCGGCATGCAAGAACACGGCACAGCACCGAAAGCCACGAACACTTGACTTGCACCTTCTGCATGAAAGTTATCATTGGGCGAGAAAATTTCGACAGCCATATACAATTCCACCACCAAGATGCCGAAATGGATGGTAGAAACGAGTTTGTGTGCGAGTCGTGCGACAAAAGTTTCGAAGAAGAGTTTTGTCTGCGGCAACACGTGAAATCAGAACACTCTTTTAAAACGTTCTACAAGTATTGCAGGAGATCATTGCTCAAACAATACGGGATGGACACACAAAATATATACAATTGTGAATATTGTGACAATTCATTTTTAACCGTCTACGAGCTTAAAGATCATATGCGCGTTAACCACGACATTGAGTACTCTCTATCAACTTGCAACGTTTGTTTCAACAAGTTTTTTAGTAAAGAAACTATGTCTGCGCATAGGAATGTGTGTCTACCGCCGCCCAACGTGAACACGTGCAGTCACTGCGATAAACTGTTCACTGATATTTCAAGCTTAGAATTTCATACGAGAATTTTTCACCCTCAAGCTCAAATCGCTGATTCTAACATTTCATCAACAAATACTGATGAATACGCTGTTTCGTTCAAATGTGAGCATTGCGACCGCATCTATTACAGCGACAGATCCCTCAAGCATCATATGAAGCTTAAACACACGACAGATGAAGAAGTAGAATGTGAATCGTGTGGAAAAATCTGCAGTAACAAGTATTACTTAGCTTCACATATAAAAATCGTCCATAACAACGACTCTTGGTCGAGATGCGAATACTGTGATAAACAGTTTAAATCCAAGAGAAATATCAGAAGGCATATTGAATACACTCATTTGGGCATGCAGCGGCACAAATGTATTGAATGCGAGACCTTGTTTAAAGAAAAACGGAGTTTGAGGAAGCATGTTCGGACGAAGCATCCTAATTCTGCGGCTTTTCCTCAGTGCCATATATGTCACAAACGATTTGAGTCGGCGAAATCTTGTAAAATACATCTTAAACTGTTGCATTCCTTCAATATGAACACCCACCCGTGTCACCTCTGTTCCGTATCGTTCAGTTCGAACGAGGCTCTAAATATACATCTCGAGACCAAGCATTTAGCCGAAGACCAAATCTACAAATGTGAGGAATGCAACTTAGTCTTCAAAGGGCAAGAGAAGTTTGACGCTCACAACGATGTCTGCCACGTCAATTTAGTCCCTACGATCAAGCAGAAAGTACTGCCTAGATGCATTCTTTGCATGAAAGACTTTAGCACACGGAAAACGTTGAAACGGCATATAAAGAAATTCCACGAAGAGTTTGATGTGGACGAGTTAGCAAGTTTTGGGTCGAGGCGAAGAACGTTTGCAGTTGATTGTGAAGACTGTATAAAAAATTTCAACGATGATTTCCATTTGAGCGTATATAATAAGGTAAAATATTTGAGGGACACTGAAGTATTTAAGTGTGGGACTTGTTTCGAATCCTACAACTCCTTGGAGTTCGCGATACAGCGGTATAAGGTGATAAACGCCGATGTTTGTAAAACCAAAATGATTTTGAGCGAACTTTGTACCGCGGAGATGAGCGAGGAAGAGCATGACTTCTCTGACTTCGGAGCTCTGCACGATATGTTGCCGGAGAGTACTACCGCTGATCTACATTTAAAATTCGAACCTCAAGATAGTTCTGATACTGATATTAAGACGGAACCAGTGTCGCCGTAA
Protein Sequence
MYQNQLDFVCDYCSRTFTRKYNLQTHIENCHINSSCHCNICGQNFGSPAGLIQHLSRGHNNYGQPFPECELCGRIFTRKQNITSHMITVHLQGLGYEIRCRLCEKTFTTERNLKRHINQLHNPDVEYPTCNDCHKVFKGKHSLIAHIQTVHNVSERDAIKCHLCEKVYTNNRNLKRHVEMFHGVKGEFRCDICPKVYTSNQSLRRHARTRHSTESHEHLTCTFCMKVIIGRENFDSHIQFHHQDAEMDGRNEFVCESCDKSFEEEFCLRQHVKSEHSFKTFYKYCRRSLLKQYGMDTQNIYNCEYCDNSFLTVYELKDHMRVNHDIEYSLSTCNVCFNKFFSKETMSAHRNVCLPPPNVNTCSHCDKLFTDISSLEFHTRIFHPQAQIADSNISSTNTDEYAVSFKCEHCDRIYYSDRSLKHHMKLKHTTDEEVECESCGKICSNKYYLASHIKIVHNNDSWSRCEYCDKQFKSKRNIRRHIEYTHLGMQRHKCIECETLFKEKRSLRKHVRTKHPNSAAFPQCHICHKRFESAKSCKIHLKLLHSFNMNTHPCHLCSVSFSSNEALNIHLETKHLAEDQIYKCEECNLVFKGQEKFDAHNDVCHVNLVPTIKQKVLPRCILCMKDFSTRKTLKRHIKKFHEEFDVDELASFGSRRRTFAVDCEDCIKNFNDDFHLSVYNKVKYLRDTEVFKCGTCFESYNSLEFAIQRYKVINADVCKTKMILSELCTAEMSEEEHDFSDFGALHDMLPESTTADLHLKFEPQDSSDTDIKTEPVSP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00447464;
90% Identity
iTF_00072251;
80% Identity
iTF_00364253;