Cvac017249.1
Basic Information
- Insect
- Conistra vaccinii
- Gene Symbol
- SNAPC4
- Assembly
- GCA_948150665.1
- Location
- OX411337.1:8174430-8176811[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 3e-10 3.2e-07 30.9 0.1 1 45 259 305 259 306 0.94 2 4 1.9e-07 0.0002 21.9 0.1 2 44 313 359 312 361 0.95 3 4 5e-11 5.4e-08 33.4 0.0 1 43 365 407 365 409 0.97 4 4 4.1e-06 0.0044 17.7 0.0 3 45 417 461 415 462 0.91
Sequence Information
- Coding Sequence
- ATGGAAATTGACGACATTGAGTTGGACTCTGAGACCGACTCGGAACTCTACAGTGATGACGATTCGATATTCGAAGCTGAAAACATGAGCCGTCGTCTTAAGTTGCTAGACGATGACGACGCCTTACCCAGTGCGGGACAGACTCACAGTTTCAATAAAAGAAGCAGTGAATCATCAGCAGCACAAGCTCAAATAGATCTAGCTTTGTCGGCAAACAAATTATTAGAAGAAAAGATGAAGAGACTGGAGAGAGATCTCGCTTCACGTTTGTGTGAGTGCCGAGAGAAGCTGAAAGTAGTACAAGGTAGAGTTGGTATACAGAATGATAAAAATGGAACTTTCCGCTACATCAATTGTGGTAGACCCTACTTTAAAGACAGACAGAACTTCCCGGCTCCAGATAATGATGATGCTAAATTGGCAAAATCTCAGATGTATGACTTCTCCTTAGTCATTTCAGCACCTGGCTGGACAGTGAGAGACAAATCTCAATTCGTTAACATGATGCACAAAATGTCAATTGATATTAAAAAAAATGAGCTGTTTGCAAAAATTTCTGCCTTACAACGCCAAGATAAATCTAAAAAAGTGGAAAGAGAAATAATGGCTATTAGAAAGGAAATTGATATAGTAAGTAAACTGCCTTTGTTTAAAGTAGCTCTTCCGATAGACGAGGAGTATGATTGGGACATGTTAGCAAACAAATTAAATAGGAGGCACACAGCACAAGAGTATCAATCATTCTGGAAGTTATTCTTTCATCCTTCAATTAGCAAAAATAGTTGGAGCAAAACTGAACATGCAGCATTACAGAAAGTTGCTTGCCAGAATGGTAAACAGGATTGGGATAAAATTGCTCTCGAACTAAATACTGGCAGGACTGGGTATCAGTGTTTTGTATATTATCGGACGAATATGACCAACTCTTTTACTGGAAAGAAATGGTCTAATGAGGAGATAACATACCTTAAAAGATTAATAGAATATTTTAAAGAAGATTTTTACATTCCATGGGGGAAGATAGCTGCAGCAATGGAAAACCGAACTAAAATCCAAATCTATAATAAGTATATGAGACTCATTGAACAAAGGAAAGGCAGGTTCCTCCCTGAAGAAGATGCGGTTATTCTTAATTGTGTGCAAAGATTTGGACAGAATTTTAGGAGGATGACTTCTTATTTACCCGGCAGATCTATGGTCCAGATACGTGCTAGATATCAAGTCTTAAACAGAATGAGAGTGTCAACTGTATGGACTGTTGAAGATGACAAGAAACTTATTCAATTGATGGCCAACCAAGAGCCTAACATGAACTTTTCAACAGCTGCCCAATTTTTTCCAAACATAACCAGAACAAAAGTTAGATCCAGATATGTTACTTTAGTTAAATGGATGAAAAAACATCCCAATTTAGATTTGGAACATGCACCGAGACGAGGCGCGCGACGTTTGAATCATGGAGAAGCCAGTGGAAACCTGATAGAGGCAGTAGAGAATTTAAAAAATTCTCTAATTACTACTGTCCAAAAGAGAGCTAAGAAAAAGAGGATTACTGAAGAGTCTACTCACAAAGATTTAAATGATGCTATTGTTGTGCATCTTGTGAATTGTATTGTAAAAGAAAAAGAAACAGAATCGAAGAAAATGACTCCAGAAGATCATTTAGTTTTAGGTCCTGACCATGTTGTCTCATTTGCAGACTTAAACATTACAAACCTACGCAAAAATATAATATTTTTAAATGCACGTCTAGACGAGTCTGCTTATATTGACAGTAACTACGAAGAAGATTATCCGTCTTTAGGAGATAGTAGTCAAGATGTTTCTTTAGTTAAAGTGAAATCCTATTCTCGGAAGCCCTCCAACCAAACTATAATGGTTAGAAACGCTCCTAATGTTTGGGGAACTCCTACGCTTTTTCAAGGCATACGAATGTTAAATCAGCGGAAGTATGTGTTCCCTCCACAACTGGCAACCATTACCGGTGCTAGAGCAATAATGGCCTGTGTGATGGCAACCGGTCCATACAGTGAATCTATAAACCTACATGTGCTTTGTAGGCGTAACATATTATTGAAGGAGCTCTTAGATCAGGCTCTTGAACGTTTCTATGTTTTGTTCACATGGCCAATGATCTTATCCAATGAAGTGCCTAATGAGAATACTGTATCAAAACTACCAAGAACAGCTTCTGTTTTTGTCCGACCGCCCATATTGCCAACTGCGCCTGAAGTTACAATTAATGTTAAATGTATAAAGAAATTTAAAAATAGAGATGTCACAGAAGTTATTGATCTTGATGAAAATGCAGCTAAGGACGTTGTGATTGCTGTTGAGGAGAAACTTGATACTGATGAGAAGATAGAAAAACTTCTTTGTTGA
- Protein Sequence
- MEIDDIELDSETDSELYSDDDSIFEAENMSRRLKLLDDDDALPSAGQTHSFNKRSSESSAAQAQIDLALSANKLLEEKMKRLERDLASRLCECREKLKVVQGRVGIQNDKNGTFRYINCGRPYFKDRQNFPAPDNDDAKLAKSQMYDFSLVISAPGWTVRDKSQFVNMMHKMSIDIKKNELFAKISALQRQDKSKKVEREIMAIRKEIDIVSKLPLFKVALPIDEEYDWDMLANKLNRRHTAQEYQSFWKLFFHPSISKNSWSKTEHAALQKVACQNGKQDWDKIALELNTGRTGYQCFVYYRTNMTNSFTGKKWSNEEITYLKRLIEYFKEDFYIPWGKIAAAMENRTKIQIYNKYMRLIEQRKGRFLPEEDAVILNCVQRFGQNFRRMTSYLPGRSMVQIRARYQVLNRMRVSTVWTVEDDKKLIQLMANQEPNMNFSTAAQFFPNITRTKVRSRYVTLVKWMKKHPNLDLEHAPRRGARRLNHGEASGNLIEAVENLKNSLITTVQKRAKKKRITEESTHKDLNDAIVVHLVNCIVKEKETESKKMTPEDHLVLGPDHVVSFADLNITNLRKNIIFLNARLDESAYIDSNYEEDYPSLGDSSQDVSLVKVKSYSRKPSNQTIMVRNAPNVWGTPTLFQGIRMLNQRKYVFPPQLATITGARAIMACVMATGPYSESINLHVLCRRNILLKELLDQALERFYVLFTWPMILSNEVPNENTVSKLPRTASVFVRPPILPTAPEVTINVKCIKKFKNRDVTEVIDLDENAAKDVVIAVEEKLDTDEKIEKLLC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01246845;
- 90% Identity
- iTF_00037763;
- 80% Identity
- -