Basic Information

Gene Symbol
nfxl1_1
Assembly
GCA_029603195.2
Location
JAQSLO010000033.1:664128-681746[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 14 1.2 1.2e+04 -2.9 1.0 4 10 182 188 182 188 0.95
2 14 1.3e-07 0.0012 19.5 17.0 1 19 196 213 196 213 0.99
3 14 4.7e-09 4.6e-05 24.0 13.1 1 19 249 268 249 268 0.97
4 14 2.9e-06 0.028 15.1 10.5 1 19 303 321 303 321 0.98
5 14 1e-06 0.0099 16.6 12.8 1 18 356 373 356 374 0.97
6 14 0.22 2.1e+03 -0.5 0.9 1 10 383 392 383 392 0.76
7 14 3.7e-06 0.036 14.8 16.6 1 18 408 425 408 426 0.98
8 14 8.6e-08 0.00084 20.0 12.1 3 18 437 452 435 453 0.91
9 14 3 2.9e+04 -7.2 11.2 9 18 499 508 492 509 0.89
10 14 0.16 1.6e+03 -0.0 5.6 3 12 522 531 512 531 0.85
11 14 1.3 1.3e+04 -3.0 0.9 6 10 590 594 589 594 0.90
12 14 0.00058 5.6 7.8 6.6 1 11 600 610 600 611 0.94
13 14 0.0053 52 4.7 14.1 3 19 640 656 639 656 0.94
14 14 6.6e-05 0.65 10.8 11.6 1 17 707 725 707 727 0.86

Sequence Information

Coding Sequence
ATgagtaaaaaagtaaataacaaaattttaaaatcttccgAAAATGAGGCTAAgagacaaaaaaatgaaaattttaaaccggTAGCCGAAATTTATGAATCCAGCTCAGAGGAAGAGGATTTGAATGAAGAATCTATTTTAGATAAAGTGTTTCAAGGTTATTCTGGAGATTCCGATCAAGTTGTAAAAAGTCGagcatttttggaaaatttttttcaatccgGTTCAGCTATTTGTTTAATATGTATTGGAACAGTTAAAAGAGTTGAAAAGATATGGTCTTGCATTAACTGCTATTGTTTTTTCCATCTCAATTGCATAAAAAGATGGGCCAATGATAGCATCGTGcaacaaaaattgaatcaaGAAGATGAAGTAGGTTATTATAATAACCAAGGAGAATTTATACCAAAGAAATGTAAACCCGTACGATGGTGCTGCCCAAAATGTCGAAGTAATTATAACGTTGAGAGTATACCAAGGCTGTATGAATGCTTTTGTAAAAAAGAAGTGAATCCGCCATACCATCCTTGGATAATTCCACATTCTTGCGGAGAAAAAtgcgaaaaatatttagaacccTATTGTGGCCATAAATGTTTATTACTTTGTCATCCAGGGCCATGCCCACCTTGCCCACAATACGTCTCCACAGCATGCTATTGTGGAAAATCTAAGCCTAAGACTGTTCGCTGTTTCAATAAAACATGGAACTgcaatattaaaTGTCAGAAACTACTACCTTGTGGAATTCATAAATGTGAAGAAGTTTGTCATGCAACGGGAAAATGTCCTCCTTGTAAAAAACAATCTAGACAAAAATGTCAATGTGGAAGTGaagcaacacaaaaaaattgttcagaATTGGTTTGGCATTGCAAAAAGgtATGCAATAAAACGTACTCCTGCGGACTACACAAATGTAGGAAAGTGTGTCATGCTGATGATTGCGGTGACTGTCCATTAGGTTTACCCAGAAGTTGTCCTTGtggaaaaaataaaatagttGCGCCTTGCAGTGAAGCTGTAGAACCTTGCGGGGATAACTGCCAAAAGGTTCTAGATTGTGGTATTCACTATTGCAGTGAAAGATGTCACAAGGGCCATTGCAGTCAGTGCCTtgctattattgaaaaaaaatgtcgGTGTGGACAACATACCAAAGAACTACCCTGTTCAAAAAGTTTCTTTTGTGAGACAAAATGTAAGTTGATAAGAGAATGTGGCAAACATCTCTGCAATAAAAAGTGCTGTGACGGCCAGTGTCCTCCGTGTGATAAAATCTGTAATAAAACTCTTTCGTGTAAAAAGCATAAATGCAAATCAGTTTGTCACGATGGTCCTTGCTACCCCTGCGATTTAAAGTCATCAGTTAAATGTCGTTGTGGTAACACTTCGATAGTAGTTCCATGCGGAAGGGAAAAAAAAGTCAGGCTACCTAAATGCTTGCTACCTTGTAGaatacCGTCTAAATGTCATCATGAAAACCCTCATCGATGCCATATAAATGAATGCCCGCCTTGTATTCAAAAATGTGgactaaaaaataatacaacaaaTTGTGAACATCCTTGTGAAGCAAGATGTCATGACGCTatcaaaacagaaattttacaatcaaaaacttcaaatatttgGGACTGGAATTCTAATAtgtttgaatacaaaaaaatgccTCATCCTAAATGCGAAATTAAAGTGATGGTTCGTTGCATTGGAGGTCATGAAATCGCTGAATGGCCTTGCTGGAACTCTAAACCAACATCCTGTCAAAGACTTTGTCAACGAGTTTTAAAATGTACTAATCATACATGCACTAAAGTGTGTCACGTAGTCCCAAATTTAGATGACAATCAGGAACAAGAAGGGTGCATTAGTTGCTCCGAAGCATGTATTGTGAAACGCCCGAAAGGCTGTATTCACAGTTGCAAGAAGCCATGCCATCCTCCACCGTGCGATATATGTTCAGCGCATATAAAATCAGCATGTCATTGCGGTATATCGCAAGTAATTTACAAATGTAATGAATTTTACTGTGAAGGAACAAATGAGGAGGAATTacgaaaaaagcaagaattattaaaaagttgtgGAAAtcgttgtattaaaaattacccTTGCGGGCATCGTTGTATTGCAAACTGTCATTCAGGAACTTGTCCCAACCCGGAACAATgtagaaaaaaagttaaaatatactgcgaatgcaaaaatttgaaattggaaatttctTGTGATAAACATCGAAATGGCTTAAATCAATTAGTATGTGACAATAAATGTGCCCAAAAAAAGGCGATCGAAGAACAACTACGCAGGGATGAGgaggaaaaattaaagaaaatggagGAAGAAAAAAACCGCATCGAGCTggaattgtatgaaaaaaaatttggtaagaaAAAACCACGCGAAAGGAAAGTTGTAGAGCGACCTGTAAAAAGAGATATAGatataaaactaaaagtttTAGCAGAAAAGTCATCAACTATAgttagcaaaaataatattcctgAAAGTattgaaagtaaattaattaaaactgatAAATTGGATAtcgataacaataaaaacagtgATTGTATTTCATCTGATTCAAATGAAGATTTGGTTATACCACTAGATTGTGTTAGCGAACTTTGTAGTGAACCAAATGATTTGAACAGCGAAACTAGTAATAATATGGGCAATATTATAAGATGTCACCATCatgataatgttatatttttggaaacaCCAGTAATAGATGATAATAATGTTTGCTTAGTTGATAATCACAATGATTTTGATTCATCGATCAAATCTTCGGTAAAACCAAAAAGATTAAGTGAAGAATTTTTATCATcagatgataatgatgatggtaTCATTGATGATTTATCAGCTTCGTCTTCATCTACTACTAATATAACTGCAACAACTACCGCCTCTAAAACCAATCCAacatctaaaaaagaaaatagtgtCAATTCATTAAATCGTGTAAAAACTTTAAGTGAAAAGTCAAATGATACTTCAATAGTAAtccaaaatgtattaaaaagcaATActcttaaacaaaataatagtgataatacaaatgataatattcaaaaaataaattcaaaacggGTTTATAGTATGGAAGATGAAAGTACATCTTCTAGTAACATAATTGATGTAAAAGAAGAATCTCATTTAATTCTAGAACGTGaagatgatgacgatgatgaagTGATCGATGGTGATAGAGAAGATGTATATGAAGAAGAAATTGAGGATGATGATGCACCAACTTCGTCATCTCTATGTGATGCTAATAGTCTTGCCGGAATTCATGATGGAAACGAAAATGATGGTGTTAACGGAATAAATAGTGGAACGCTTAGCTCTGAATCCACTGTTTCTTTTTATGACAATGACGTGCAATCAATGGATGCAATTGAACGTAGAGATTTTGAACACGAGCAACGTTTGACTGGTGGAATATTAATGAGAAGCCAATCTTTAattaatagtgataataaactaaatatggaaataataaaatcttatcaTCCTCGCCATgatagtaaaagtaaaaaagaagagATTTccaaaagtaatgaaaattttaagaattcaacGATATCAACCAATGAACATGTAACGACGCCAACAAGTAGTAGAAACTGTTCCTCTCgtgtaaataaatcaattacaaAACTAAACTTATCAATGACTTTGGAAGGAATCAATaagaaacatgaaaaaattattgaaatggaTTCGTTACAAAAatctacattaaaaaaattgcaacccAGTACGAGTAGAACAcatcatataataaatatatattcgtCTACATCAGTACCATCCTCTTCGACTAGTATTAACGGTTGTAATAGTACTAATAATCAAAATCGTTTACAACTCGCCAAAAAAGTCGACTTATGTTTAGCAAACTCAAATTCAAATGATAGTCTTTCATCAGATAAGTCTTATAGTACCTCATCAAATCATTCCTTGCCAAATTTTTCCAGCAAGAAACCAAATCACAATATGTTCAAAGATAATACTGAAAATAATccaagcaataataataaaaacaatttctctATAGTAGAACCTGTCGCTGGAACAAGTCGGGGACAGAATGGTGCATTAAGTTCTACGAAATCTGACAGCGTGAAAGTAGAAAAGAAAGGAAGTGATAATAATAGTATCGATGATCTTGATTCAGAAGGAACCTCATCTTCGTCAGTGGCTATAACCGCGTCTAAAAATAGTATACTGACTGAGAAATGTCAATATTATACGAATGAATCACTTTGCaaagtaaaaagtttaataaatgcGGAACacgaaaattatgaaatgttaaatagtaaatttaaagcTAGCAATTACAAGTCAGTTAGatttaacaaaagaataaataaacaatCTTATAACGAAAAATTAAGCGAAACAAATTCCCACAATTCAGTTCTGCCTGTTGACATCTTACAACCGGCTAACGAAAATGACGAGCAAATGGATGATAATAACGAAAATCTTCAAGAAGAAATATCGGATCATAATAACTTTGATGAAGGAATAATTGAGAATGATGACTTACTAagTAATGAACAGCAGCATGAAAACGATTTTGTCGATGATGAAACTTGGGTAGATTGTGAAGAGGGCTCTGATGAAGAAATTTGtacatgttataataataacaataacaacgaGGAAGATGATTTACCTTCAAAAGATGTTGACCTATCTAGTTACATACAAATGGTATCGTTATCAGAAGATATGTTCTTTCCAGAAAATGCAACAATGCCGACTGAATTTTCTAACTCCGCACAACATCAACGTAAACGAAAACACAATGATAGTATATTGAATAATACTTGCACTGTTACCAATTCTGAATCACCTGATAGCGCTTTTAATGAAGTTGGAAGTGGAAGGAAAAGAATGGCTCTTGATTATACATCTACACCACGTACCTctaacattaataattatttttccagtCCATCTTCAATAACGACTTCAGTCACACCCATAGTTTTAGGCTCAGAAATTCGTCGTACACCCCGCTCTATTATACCAACAAAAGATAATCCACCACCTGAGTTGCATGACTGGCTAGCGCAATTTCAAAGATGGTCTCATGCTGAACGTTTATTAGCGCTTGATCGACTAATAGAACATTGCGAGCCACAACAAGTTCGTCATATGATGAAAGTAATTGAGCCACAATTTCAACGCGATTTTATATCATTATTGCCGCGTGAGTTGGCCCTGCAAGTTCTTTCATATTTGGAACCTAAAGATTTATTGAGAGCTGCCCAAACATGCCGAAGCTGGCGTTACTTATGTGATGACAATCTTTTGTGGAAGGAAAAATGTAAAGCTGCTCAAATTACGACCGAACTCAAGCCAACTAAAAATGGGATACTAACGGGTGAAGCTCTTCCAAAACGTGGTAGAGCAGGTAATATGCCACCGATATCGTCACCGTGGAAGGCAGCATATATGCGCCAGCacataattgaaatgaattggcGAACTCGTCCAATAAGAgatccaaaaattttgaaaggccACGATGATCATGTCATAACTTGTCTACAATTCAGCGGGAATCGTATTGTTTCTGGATCTGATGACAATACTTTAAAAGTTTGGTCAGCTGTAACTGGAAAgtGCCTTCGAACTTTAGTTGGTCATACAGGAGGTGTATGGTCATCGCAAATGTCtggcaatataataatttcaggaAGTACAGATCGTACATTAAAAGTATGGGATATGGAGACTGGACAGTGCATTCATACATTGTTGGGTCATACATCCACAGTTCGCTGCATGCATTTGCATGGGAAAAAagTCGTAAGTGGATCACGAGACGCTACATTGCGTGTTTGGGACATTGAACAGGGATCATGTTTACATGTTTTAGTGGGGCATTTAGCTGCTGTTCGGTGTGTGCAATATGATGGCAAATTGATAGTATCTGGAGCATATGATTATATGGTAAAAATATGGCATCCAGAAAGGCAAGAGTGCTTGCATACTTTACAAGGGCATACAAATAGAGTATATTCGTTGcagttCGACGGTATTCATGTTGTTTCTGGTTCATTAGACACATCAATTCGTGTTTGGGATGCCGAGACTGGTAATCCCAAACATACTTTAATGGGTCATCAAAGTTTAACATCCGGTATGGAACTAAGACAAAATATTCTGGTTTCGGGAAACGCTGATTCGACTGTGAAAGTTTGGGATATCACAACTGGACAATGTCTTCAGACTTTGTCAGgtccTAACAAGCATCAATCTGCAGTTACTTGTCTACAATTTAATTCGCGTTTTGTCATAACCAGTTCAGATGATGGAACCGTAAAGTTATGGGATGTTAAAACTGGTGAATTTATTAGGAATTTAGTAGCTTTAGAATCTGGTGGATCTGGCGGTGTTGTTTGGAGAATTagagcaaATGATACAAAGCTGATTTGTGCAGTCGGTTCACGAAATGGAACAGAAGAAACAAAGCTTATGGTTTTAGATTTTGATGTTGAGGGAGCCTGTGTTAAATGCtcataa
Protein Sequence
MSKKVNNKILKSSENEAKRQKNENFKPVAEIYESSSEEEDLNEESILDKVFQGYSGDSDQVVKSRAFLENFFQSGSAICLICIGTVKRVEKIWSCINCYCFFHLNCIKRWANDSIVQQKLNQEDEVGYYNNQGEFIPKKCKPVRWCCPKCRSNYNVESIPRLYECFCKKEVNPPYHPWIIPHSCGEKCEKYLEPYCGHKCLLLCHPGPCPPCPQYVSTACYCGKSKPKTVRCFNKTWNCNIKCQKLLPCGIHKCEEVCHATGKCPPCKKQSRQKCQCGSEATQKNCSELVWHCKKVCNKTYSCGLHKCRKVCHADDCGDCPLGLPRSCPCGKNKIVAPCSEAVEPCGDNCQKVLDCGIHYCSERCHKGHCSQCLAIIEKKCRCGQHTKELPCSKSFFCETKCKLIRECGKHLCNKKCCDGQCPPCDKICNKTLSCKKHKCKSVCHDGPCYPCDLKSSVKCRCGNTSIVVPCGREKKVRLPKCLLPCRIPSKCHHENPHRCHINECPPCIQKCGLKNNTTNCEHPCEARCHDAIKTEILQSKTSNIWDWNSNMFEYKKMPHPKCEIKVMVRCIGGHEIAEWPCWNSKPTSCQRLCQRVLKCTNHTCTKVCHVVPNLDDNQEQEGCISCSEACIVKRPKGCIHSCKKPCHPPPCDICSAHIKSACHCGISQVIYKCNEFYCEGTNEEELRKKQELLKSCGNRCIKNYPCGHRCIANCHSGTCPNPEQCRKKVKIYCECKNLKLEISCDKHRNGLNQLVCDNKCAQKKAIEEQLRRDEEEKLKKMEEEKNRIELELYEKKFGKKKPRERKVVERPVKRDIDIKLKVLAEKSSTIVSKNNIPESIESKLIKTDKLDIDNNKNSDCISSDSNEDLVIPLDCVSELCSEPNDLNSETSNNMGNIIRCHHHDNVIFLETPVIDDNNVCLVDNHNDFDSSIKSSVKPKRLSEEFLSSDDNDDGIIDDLSASSSSTTNITATTTASKTNPTSKKENSVNSLNRVKTLSEKSNDTSIVIQNVLKSNTLKQNNSDNTNDNIQKINSKRVYSMEDESTSSSNIIDVKEESHLILEREDDDDDEVIDGDREDVYEEEIEDDDAPTSSSLCDANSLAGIHDGNENDGVNGINSGTLSSESTVSFYDNDVQSMDAIERRDFEHEQRLTGGILMRSQSLINSDNKLNMEIIKSYHPRHDSKSKKEEISKSNENFKNSTISTNEHVTTPTSSRNCSSRVNKSITKLNLSMTLEGINKKHEKIIEMDSLQKSTLKKLQPSTSRTHHIINIYSSTSVPSSSTSINGCNSTNNQNRLQLAKKVDLCLANSNSNDSLSSDKSYSTSSNHSLPNFSSKKPNHNMFKDNTENNPSNNNKNNFSIVEPVAGTSRGQNGALSSTKSDSVKVEKKGSDNNSIDDLDSEGTSSSSVAITASKNSILTEKCQYYTNESLCKVKSLINAEHENYEMLNSKFKASNYKSVRFNKRINKQSYNEKLSETNSHNSVLPVDILQPANENDEQMDDNNENLQEEISDHNNFDEGIIENDDLLSNEQQHENDFVDDETWVDCEEGSDEEICTCYNNNNNNEEDDLPSKDVDLSSYIQMVSLSEDMFFPENATMPTEFSNSAQHQRKRKHNDSILNNTCTVTNSESPDSAFNEVGSGRKRMALDYTSTPRTSNINNYFSSPSSITTSVTPIVLGSEIRRTPRSIIPTKDNPPPELHDWLAQFQRWSHAERLLALDRLIEHCEPQQVRHMMKVIEPQFQRDFISLLPRELALQVLSYLEPKDLLRAAQTCRSWRYLCDDNLLWKEKCKAAQITTELKPTKNGILTGEALPKRGRAGNMPPISSPWKAAYMRQHIIEMNWRTRPIRDPKILKGHDDHVITCLQFSGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMSGNIIISGSTDRTLKVWDMETGQCIHTLLGHTSTVRCMHLHGKKVVSGSRDATLRVWDIEQGSCLHVLVGHLAAVRCVQYDGKLIVSGAYDYMVKIWHPERQECLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDAETGNPKHTLMGHQSLTSGMELRQNILVSGNADSTVKVWDITTGQCLQTLSGPNKHQSAVTCLQFNSRFVITSSDDGTVKLWDVKTGEFIRNLVALESGGSGGVVWRIRANDTKLICAVGSRNGTEETKLMVLDFDVEGACVKCS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-