Basic Information

Insect: Condylostylus longicornis
Gene Symbol: Bcl11a
Assembly: GCA_029603195.2
Location: JAQSLO010000006.1:1285467-1331052[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 6 0.23 24 6.3 0.7 1 23 398 421 398 421 0.95

2 6 1e-05 0.0011 20.0 1.4 1 23 880 902 880 902 0.98

3 6 0.013 1.4 10.2 4.3 1 23 908 930 908 930 0.99

4 6 1.3e-06 0.00014 22.8 3.2 2 23 1169 1190 1168 1190 0.97

5 6 1.6e-05 0.0018 19.3 3.3 1 23 1196 1218 1196 1218 0.99

6 6 3e-05 0.0033 18.5 0.4 1 22 1226 1247 1226 1247 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	6	0.23	24	6.3	0.7	1	23	398	421	398	421	0.95
2	6	1e-05	0.0011	20.0	1.4	1	23	880	902	880	902	0.98
3	6	0.013	1.4	10.2	4.3	1	23	908	930	908	930	0.99
4	6	1.3e-06	0.00014	22.8	3.2	2	23	1169	1190	1168	1190	0.97
5	6	1.6e-05	0.0018	19.3	3.3	1	23	1196	1218	1196	1218	0.99
6	6	3e-05	0.0033	18.5	0.4	1	22	1226	1247	1226	1247	0.97

Sequence Information

Coding Sequence: ATGCTTGATGTGACCCATACGCCATTTTGGAATTTCTGGATTGTCGACAACACTTTCGTGGGTTTTGGAAGATGCCCTTTCATATTATcGGACTCCGATACAGCTGAACCGGACGCTGCATCACAGGATATATTAACATGTGGTTCCTGTCAAAAAGCATTCGCATTATCGGATATTGTTAGATTTATACAACATAAAGTATTACaatgtaataaagaaaattatggaCAATGTTATTCACAagctCCAACAAATGATAGGGATGGTGATGATGGCCGTCCTCTTAGTTTAGTTAATAGAAGACCATCAATATCAGCACCAATAACTGGTCGTAAATCATCTGGATCCCGTGTACATACACCACCACCTAGTCCAGTTGAATTATTAGCAGATGGGGCATCAAGTACACCAAAACGTTTAGTTGATgaaaatgataATACAACAACACAAAAGGATACAACAACAAATGATCAAATATCAATAACATCAACCGAATCTAGAAAatctaaatcaaataaaaatacattatcaTTAACGAAATTATCACAAAATGATACTGTAACACCAAATTCACCACCACAATCACCACATtctgataataatgataatgattgtagtaatacacaaataaatattgatCGTAATGATAATTTAGATATTAATGATCAAAGTATAATAACAAGACAAAATAATGAttctttaatatcaaataaaaatcataataataataatttaaataataaaagtgatgatagtaaattaaatagtgaaaataataataataatataaataaatctaaacCAAATAGTAAAATTGATAATCATAacagtaataatgataataataataataataacaatggtaatgataataataataatgatgataatagtaataataataattatgataaaaatcttaataatagaaaaattaaacaagaatgTATTGATCTTGCTGATAATGAACAtgaaagtatacaaaatttaacgtccaataataataataataatgataataatagttgtaataataattatcataataatgatagtaataataataataataatattagtaataataaacataaagataataatgatataatagATGAACCATTATTAAAAAGACCAAAAATTGAAGTTGTTGATGCTGAATCAAATACAATGCATAGtgaACCGAGTAATTATACATGCTCAACATGTAAAACACGTTTATATTCTGCATGGCGTCTCATTCAACACGTCCAAAATTCACATGGTGTTAAAATATATGTTGATGTGAACGCAACACAATCATCATCACAACCATTATTAGTAACAACAACACAAACAGTGACAACAACAGTAACAGCAgcgacaacaacaacagcattaacatcatcaatatcatctGTATCATCGaatcattcaataaatttatctgTTGGTAATGGTTCAATTTCAACATCAAcatcaaattcatttaatactTTATTACAACAATCTGGtcacaataataaattgatttcatCACATAATAATGTTAGCAATTCATTGATTGGTATCAAAGATTTAAGTTCAAGTTCATCAAATTCTTCGCtatcaaatgaaataaatttagtaaatgctaataataacagtaataataataataataatacaagtaATCGTCTTGGcaacagtaacaataatattaataacaataccagtaatattaataataacaataatagtaataatagtacaACTAGTCAAAGTAGTAATAATAGCCATTCATCACAACAGcaatatcaacaacaacaacaacagcatcaACAACAATCTTCAGCACAACATCATCTACATGCAATGCAAAATGCTCAAAATTTAGCAGCAGCTGCTGCTGCACAAAGTATACGTCATCATCCATTATTACCACCACCAGATATGCATCCAAATCCATTTAATTTGTTGAGAATGCCCTTGCCACCACTTGCACAAGGTCCAGTAGTTCCTTCACAAGTTGCTCCATTATTTTCGAGACCACATCCGGATCATTTTCGTATGGAGCAATTAGTTTCTGAGCAATTCCGTCATCATGGCCTTAATTTAGCTGCGGCTGCAGTTGCTGCTGCTAATTCATTAAATCCACATAGCCAATCGTTTAGTGCAGCGGCGGCAGCAGCAGCAGCTGCCGCAGctgttaataatcaaaataactcTGTTAAACAAGAACGTCCATCTTCAAATAGTAGCAGAGGTTCAATAACACCAGCAGGATCACAACCAAGTAATCTTTCTGCTAATAATCCTGTAGCGGCTAATGTTCCAAATAGTTTAAATGTGTTAGACCAACCCCAAATGGATTTCTATTCACAAAGATTACGTCAGCTGGCTGGTACAACAAGTCCAGGTGTCGTTAACGCTCCAACCAGTTCACCAAGCCCACGTAAACAACAATCACCATCATTTGCAAGTCCATCGCCATCACAATTGCCACCGACTCCTTTAACAAATACTAATTCTAGACCTCAAAGTCTTACACCACCagaaaaaacaaatgatttaCTATTATCTAATGTGaacaatgaaaacaataatgCAACACTGACAACAACACCACGTTCAGCATCAACGCCTCCATCAAAGAATAATAATTCACAGGATGCCGTTTATTCTTGTGAATATTGTGAAAAGAAATTCCGTTTTGAAACCAATTTGATTGTACATCGAAGAATTCATACCGgagataaaatttacaaatgcaCATCATGTGAATTTGAATGTGCTCATATTGGAAAGTTAAGGAAACATATGAGGGTTCATCGAACACCTGAAGATCGAACTAGTAATGCTGGTTCATTGGAAACACTAGATGGAGAAGACTCTCCTGAAGAAGAAATGGAAGATGAAGAACAGGTTGATGAAGATGAAATGGATGAAGAAGATATTGAAGATAATGATGAAGTTAAATATGAAGCAGAAGATCTTACTGTTAATGCCAGATCagattataagaaaatgttaaccCAACATCCAGGTTCTTTAGTTGGAGAACTTATGGACAAATTCGGTTTGTCAAATATTGCCCAATATTCAGAAGCATATAAACAAGCATTACAAGAATCGGgaaatgctttaaaattgcatttggCTAGTAAGGGTCATcatgacaataataatagtacaaTGCCACCATTAAATGATAAACTTAATGGTCTTCCTGCTGCACTAAGATTACGTGAAGAATTTGCTAAAAATATGTTACATCAATCACAACAAGCAGCTGCAGCAGCTGCACAACAACACGCAGCACAACAACAAGTTCCTTTATTCAATCCATTTGAAAATCCATTTGAAACTTCCAAACGAATAAAACTTGAAGCTGCTCCCGAATGGTGGAATTTATCTGGATTACAtagaaatgatttattatttgaaaatttaaaattaaaaccaatgCTGCCGAATCCAAATAATCCTCCATTAATGCATTCTCAATCGGCACCATTAAAAAAAGATGGCTCAAAACGTAACGATACATGTGAATTTTGTggtaaagttttcaaaaattgttccaATTTAACTGTACACCGACGTAGTCATACTGGTGAAAAACCATATAAATGTGAATTATGTTCGTATGCATGTGCTCAAAGTTCAAAATTAACACGACATATGAAAACACATGGCCGTAGTGGTAAAGATGTATACCGTTGTCGTTTCTGTGATATGCCATTTAGTGTACCATCAACATTAGAGAAACATATGAGAAAATGTGTTGTTAATCAAGGTAAAGTAGCAGCTagtgctgctgctgctgctgctgcagcTGCTGCCGCAGCTAATTTAActaatgcaaataataataataatcaacaatTATCAACATCACATTTACCGCAATTACCATTGATAACTGGTGCCGGTGGACCATTATCTCAGCAGCAACAACCCAATTCAacaattaataatcaaaatcaacaacaacaacaacagcatttaatatcatcatcatcgtcatcatcaccGTCATTGTCACAAcaatcacaacaacaacaacagcaacttTCTTCATTAATACCAGGACCACATCAATTATCAAGTTCAGCACGTTTAAtgtcaagaatattttaa
Protein Sequence: MLDVTHTPFWNFWIVDNTFVGFGRCPFILSDSDTAEPDAASQDILTCGSCQKAFALSDIVRFIQHKVLQCNKENYGQCYSQAPTNDRDGDDGRPLSLVNRRPSISAPITGRKSSGSRVHTPPPSPVELLADGASSTPKRLVDENDNTTTQKDTTTNDQISITSTESRKSKSNKNTLSLTKLSQNDTVTPNSPPQSPHSDNNDNDCSNTQINIDRNDNLDINDQSIITRQNNDSLISNKNHNNNNLNNKSDDSKLNSENNNNNINKSKPNSKIDNHNSNNDNNNNNNNGNDNNNNDDNSNNNNYDKNLNNRKIKQECIDLADNEHESIQNLTSNNNNNNDNNSCNNNYHNNDSNNNNNNISNNKHKDNNDIIDEPLLKRPKIEVVDAESNTMHSEPSNYTCSTCKTRLYSAWRLIQHVQNSHGVKIYVDVNATQSSSQPLLVTTTQTVTTTVTAATTTTALTSSISSVSSNHSINLSVGNGSISTSTSNSFNTLLQQSGHNNKLISSHNNVSNSLIGIKDLSSSSSNSSLSNEINLVNANNNSNNNNNNTSNRLGNSNNNINNNTSNINNNNNSNNSTTSQSSNNSHSSQQQYQQQQQQHQQQSSAQHHLHAMQNAQNLAAAAAAQSIRHHPLLPPPDMHPNPFNLLRMPLPPLAQGPVVPSQVAPLFSRPHPDHFRMEQLVSEQFRHHGLNLAAAAVAAANSLNPHSQSFSAAAAAAAAAAAVNNQNNSVKQERPSSNSSRGSITPAGSQPSNLSANNPVAANVPNSLNVLDQPQMDFYSQRLRQLAGTTSPGVVNAPTSSPSPRKQQSPSFASPSPSQLPPTPLTNTNSRPQSLTPPEKTNDLLLSNVNNENNNATLTTTPRSASTPPSKNNNSQDAVYSCEYCEKKFRFETNLIVHRRIHTGDKIYKCTSCEFECAHIGKLRKHMRVHRTPEDRTSNAGSLETLDGEDSPEEEMEDEEQVDEDEMDEEDIEDNDEVKYEAEDLTVNARSDYKKMLTQHPGSLVGELMDKFGLSNIAQYSEAYKQALQESGNALKLHLASKGHHDNNNSTMPPLNDKLNGLPAALRLREEFAKNMLHQSQQAAAAAAQQHAAQQQVPLFNPFENPFETSKRIKLEAAPEWWNLSGLHRNDLLFENLKLKPMLPNPNNPPLMHSQSAPLKKDGSKRNDTCEFCGKVFKNCSNLTVHRRSHTGEKPYKCELCSYACAQSSKLTRHMKTHGRSGKDVYRCRFCDMPFSVPSTLEKHMRKCVVNQGKVAASAAAAAAAAAAAANLTNANNNNNQQLSTSHLPQLPLITGAGGPLSQQQQPNSTINNQNQQQQQQHLISSSSSSSPSLSQQSQQQQQQLSSLIPGPHQLSSSARLMSRIF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -