Basic Information

Insect: Condylostylus longicornis
Gene Symbol: -
Assembly: GCA_029603195.2
Location: JAQSLO010000134.1:16531371-16535441[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.13 14 7.0 0.1 1 23 310 332 310 332 0.97

2 7 0.022 2.3 9.5 2.1 1 19 909 927 909 927 0.96

3 7 5e-06 0.00054 20.9 0.1 1 23 937 959 937 959 0.98

4 7 7.2e-06 0.00078 20.4 0.2 1 23 965 988 965 988 0.96

5 7 5.2e-07 5.6e-05 24.0 0.6 1 23 994 1016 994 1016 0.99

6 7 5.8e-06 0.00063 20.7 2.0 1 23 1022 1044 1022 1044 0.99

7 7 4e-06 0.00043 21.2 2.8 1 23 1050 1072 1050 1072 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.13	14	7.0	0.1	1	23	310	332	310	332	0.97
2	7	0.022	2.3	9.5	2.1	1	19	909	927	909	927	0.96
3	7	5e-06	0.00054	20.9	0.1	1	23	937	959	937	959	0.98
4	7	7.2e-06	0.00078	20.4	0.2	1	23	965	988	965	988	0.96
5	7	5.2e-07	5.6e-05	24.0	0.6	1	23	994	1016	994	1016	0.99
6	7	5.8e-06	0.00063	20.7	2.0	1	23	1022	1044	1022	1044	0.99
7	7	4e-06	0.00043	21.2	2.8	1	23	1050	1072	1050	1072	0.98

Sequence Information

Coding Sequence: ATGAGTGGAACGGAAGTTCTAAAAGGATTAGAAAATGGTTCATTACAATTTATAACGGTTCCGAGAGAGGAATTCATTGATCatACATTGTTGCCTGAGTATATAACAACACACGGATTTATCATTGATACCATGCTAGATGGGGCTAACACTTCAACAAACGAATCGTTACAACATTCTACAGCTTCGTATATAGCCCATCATTCTGGCCAAACACTAGTAAACTCAAACGAAATTCAGTTACCAACAAATATAGATGAACCTGATAAGCAATTAAATGCTGCTTTATTGCGATTTTTAAAAAGTGGAAATGTAAAAGTAAACGGTGGAAACACTTCAGAAACTCAAGTAATTGTAACgaataaagatttaattaatttaacggGAACTCAAGTAATTGATGCAACAATAAAAAACGATAATTCGAATAGCTTAGATACTAGCACATTTTTGACATTCAATGATGATCAGTCAGGCTTATCTAATTCCTTAATAAGTGATGGTCAATTCAGAATATTTCAGCAACTTTCACCAAACACTCATCAGCAACAACAGCATATCCAAATTAATGCATTAAACAATTCTTCATTACCTCAATTAACCCCAATTAGAAGACTGAATCGAAGtcgtaaaaattcaattagtttGAATATTACAGACCAGCTAACTATCGATGATTTGAaaacTAACACCGAAATAGAACAAATTCAGAGTTTTCAGCATAGGCCAGCAGCTAAAAGAATTTTACCTCATAAAAAGCGAAtcactaaaaaattaaagtctaTTGATGGAAATCAAAAAGTTGATGTTTTATTTCAACACTCAGACAATTCTGTGAAATCAACAAATTcgcaaatacaattttttcaagatttaaatgaagaaattaaCGCTGATGAAGTTATTAATTTGAATTCCCCACCTCAATTTTCGTGCCAAATTTGTGGAGCAGGAGCAGAATCTCAATTAGATTTTTTTGCACATTTAAAGCTACATTATGAGCCTAAACCTGAAAGTGGTGAAATTTTAGAAGCTCCTGTAGTCAAAAATCAATcccaaaaagaatttataacgCAGCAGTCCCAATCTGAACCTCAAATTCAGATGTCAATGAATCAACAACAGTTCACACAAATACCTTTGATTAAAAGGGCAAATCAAGTAACTCAATCACAAAGATTACATCAGAATCACACACAACCATCTAACATAAACGAAACAATGCATTTGCCTCACATGAGGAGGCAGATTTCACCTAGTGACTTGCAAAATATCTCTGTTCAACCAGTTAGAGAAAATCATCATACAGATTCAGAAGAAGGATACATATTAACtactaaaaaaattgttgaatccCGAGATTTGCCCGATGTTACAAATTTTGCTTTTGAAGGATTCGCACCAATGGGATCTGTATCGAACCACTCACATTCATCTCACACGGTTGTAGCAAAAGATATTATGAATAGTACgcatgaatatgaaattttagactCTTCTTTAACGAATCATTTGCGGCATGAAAATGCGCATCAAATGCAGTTAACGAAAACAGATTTTCTTCCTCTGCAATCCGCGAGTGAACATCAAATAACACTACCTTCGCGAGCTTTGTTAAATTCAATGCAAGTTGAAGATTCAAGAATGTTGTTACATCAAGGATCAAGGTCTAACGCATTAAGTAAAAATTGTGAAGTAAAATCTCAAAGTTCgcacattttacaaaataacacgGTTTATAGTACAACTACAATTCCAACAAGTTCACAAATAGAAcaaagtttatttgaaaatcctCAATATTTTGAAGCAAAATTCAATAGCTTACCTAACCAGGTATTGAACTTAGAACATAAAATTGATACAATAAGAGTTGAGAACGATATTTCACATTCAATTTCTAACCGAAAAGATAACTTAATTAACTCAGGAACTTTATCGCAACCCTCTTTAATTTGTGAAGATCAAAATAGCTTGCATCAACTTCATATTGCAAATTCCCAGTCTGCGAACGAAGGTGATGGAACTGAGAATATTACACCTAGTATCGGCGAATTAAATGAAACTTCTCTTCAAACAAATTCACATAAATCAAGTACAAATGGTattgttatattacaaaatgatGAAGTTGAATTTAGTGACCCTGAAGATATGTTAGAAGGTATTCGTGGTGTCGTTGATAAGGTACAAGAGTCATTTGATACTGGAGATGAAATGGATGCAATGAGTCCACCTAGAAATAATTGgTTTCCTAATAATGGTTTTAATAgtgaaattaattctaaaactaTCTGTGATCCTACGCGTTATGAAACAATAACTCCAgttgaaaatttccaaatattctttaaaaatgatgaaaataatgatATGAAAAAGGAAAGTGCAAAAAAAGTTAGCGAATTATCCGAGCCTGTGGTTAATGAAGAACCATCTGAATTACTAAATAACGACATTTCTAACAGGAATAATACAAATTCTTTACTTGCTGCAGAAAATTCTTTAGCTTCTAGTACAACAAATACCGTACATTCTCAGTCCGAAAATGATAACCAAATGCCAGTTaagatggaaaatttttcaaccgATTATGAAGACTCTAATACAGAAAAAACTTCTAGTTCATTGGGTGAACCAGTAGATTCTCCGACTTCTCAAATTTCTGAAAAAGAAACACTAAAAAATTGTGGTGTTTTGTCtggaaaaaaagagagaaaaaaatatttttgtgataaatgttttaaagtatttaattctTCAAACGCTTTAAAATATCATGATTTTGCTCATAGTGGAAAAAGGCCATTTCCCTGCGAAGAGTGTGgAAAAAGTTTTTTCGCTCAAAATGCCTTAAGAGCCCATTTAAGAGTTCATTCAGGTGAAAAACCTTTTACATGTGTCGATTGCGGACGGGCATTTAGACAGTGGGGCGACTTAAACTATCACCGAATATCTTTACATTCAAacgaaaagaattttcaatgtgAGTTTTGTGGAAAAGCTTTTGCTCGAAAATATTCTTTAGTTATTCATCGAAGAATCCATACGCaagaaaagaattataaatgTGAATTTTGCCCAAAAACATTTCGAGCTAGTTCATATCTACAAAATCATAGGAAGATTCATACCGgtgaGAAACCATATGAATGTCCGACATGCAATAAGAAATTTCGTGTATGTGGTGATCTTAGGCGTCATCAGAAGATACATGATAGAACTAAACAAGTGCATGTTGATGAAATATCTTTAAGTAATGTTACCGCTCTTCAACTATCTGATACTGTACTAAATATAGAAGGACAAGAAAATaacacttttattgaatatgataaatcaaataaaaatcaaacagaTCTCAACACAACAGTTTTCATGTATTCATCAGATGGTAATCTTGATCAACTTTTTAAGACTGACaacatttcaaatcaaataaaagatATTTCATCAACAACATTACCATTAAATATAACCGGTAATGCCgcagaaataaaaaacttgattaaaaatgataacaatATAAGAAAGCTAGCGTTATCAACATCTTCAACAGAATTTTCATCTAAGTTAACACCAGCAGAATCATTGGTTACAACATccaatgcaaataaaaaagtttcaaataaaaataaaaaacaaaaaagtcgTGAAAAGGTGACGTAG
Protein Sequence: MSGTEVLKGLENGSLQFITVPREEFIDHTLLPEYITTHGFIIDTMLDGANTSTNESLQHSTASYIAHHSGQTLVNSNEIQLPTNIDEPDKQLNAALLRFLKSGNVKVNGGNTSETQVIVTNKDLINLTGTQVIDATIKNDNSNSLDTSTFLTFNDDQSGLSNSLISDGQFRIFQQLSPNTHQQQQHIQINALNNSSLPQLTPIRRLNRSRKNSISLNITDQLTIDDLKTNTEIEQIQSFQHRPAAKRILPHKKRITKKLKSIDGNQKVDVLFQHSDNSVKSTNSQIQFFQDLNEEINADEVINLNSPPQFSCQICGAGAESQLDFFAHLKLHYEPKPESGEILEAPVVKNQSQKEFITQQSQSEPQIQMSMNQQQFTQIPLIKRANQVTQSQRLHQNHTQPSNINETMHLPHMRRQISPSDLQNISVQPVRENHHTDSEEGYILTTKKIVESRDLPDVTNFAFEGFAPMGSVSNHSHSSHTVVAKDIMNSTHEYEILDSSLTNHLRHENAHQMQLTKTDFLPLQSASEHQITLPSRALLNSMQVEDSRMLLHQGSRSNALSKNCEVKSQSSHILQNNTVYSTTTIPTSSQIEQSLFENPQYFEAKFNSLPNQVLNLEHKIDTIRVENDISHSISNRKDNLINSGTLSQPSLICEDQNSLHQLHIANSQSANEGDGTENITPSIGELNETSLQTNSHKSSTNGIVILQNDEVEFSDPEDMLEGIRGVVDKVQESFDTGDEMDAMSPPRNNWFPNNGFNSEINSKTICDPTRYETITPVENFQIFFKNDENNDMKKESAKKVSELSEPVVNEEPSELLNNDISNRNNTNSLLAAENSLASSTTNTVHSQSENDNQMPVKMENFSTDYEDSNTEKTSSSLGEPVDSPTSQISEKETLKNCGVLSGKKERKKYFCDKCFKVFNSSNALKYHDFAHSGKRPFPCEECGKSFFAQNALRAHLRVHSGEKPFTCVDCGRAFRQWGDLNYHRISLHSNEKNFQCEFCGKAFARKYSLVIHRRIHTQEKNYKCEFCPKTFRASSYLQNHRKIHTGEKPYECPTCNKKFRVCGDLRRHQKIHDRTKQVHVDEISLSNVTALQLSDTVLNIEGQENNTFIEYDKSNKNQTDLNTTVFMYSSDGNLDQLFKTDNISNQIKDISSTTLPLNITGNAAEIKNLIKNDNNIRKLALSTSSTEFSSKLTPAESLVTTSNANKKVSNKNKKQKSREKVT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -