Clon011173.1
Basic Information
- Insect
- Condylostylus longicornis
- Gene Symbol
- -
- Assembly
- GCA_029603195.2
- Location
- JAQSLO010000044.1:7822508-7833623[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 21 6.9 7.5e+02 1.6 0.3 8 23 498 514 485 514 0.85 2 21 0.02 2.2 9.6 1.3 1 21 571 591 571 592 0.95 3 21 0.3 33 5.9 4.7 2 23 851 872 850 872 0.97 4 21 8.8e-05 0.0095 17.0 0.6 3 23 880 901 878 901 0.95 5 21 0.19 21 6.5 1.4 1 23 939 961 939 961 0.98 6 21 0.00013 0.014 16.5 0.1 1 23 1022 1045 1022 1045 0.97 7 21 1.2 1.3e+02 4.0 4.9 1 23 1050 1072 1050 1072 0.95 8 21 0.00093 0.1 13.8 3.9 1 23 1078 1100 1078 1100 0.97 9 21 0.5 54 5.2 1.8 2 23 1395 1418 1394 1418 0.80 10 21 0.0012 0.13 13.4 8.5 1 23 1424 1446 1424 1447 0.96 11 21 0.0055 0.6 11.4 0.1 1 23 1454 1477 1454 1477 0.97 12 21 0.0035 0.38 12.0 1.2 1 23 1557 1579 1557 1579 0.98 13 21 0.00028 0.031 15.4 1.2 1 23 1604 1627 1604 1627 0.98 14 21 0.00073 0.079 14.1 1.9 1 23 1632 1654 1632 1654 0.97 15 21 0.0069 0.75 11.1 0.1 1 23 1672 1695 1672 1695 0.98 16 21 0.013 1.4 10.2 3.1 2 23 1770 1791 1769 1791 0.97 17 21 0.015 1.6 10.0 1.2 1 19 2254 2272 2254 2274 0.97 18 21 0.0098 1.1 10.6 1.5 1 23 2281 2303 2281 2303 0.94 19 21 2.1e-06 0.00022 22.1 0.4 1 23 2310 2333 2310 2333 0.98 20 21 0.012 1.3 10.3 3.4 1 21 2339 2359 2339 2361 0.95 21 21 0.0063 0.68 11.2 2.5 2 23 2368 2390 2367 2390 0.94
Sequence Information
- Coding Sequence
- ATGACCAAAGTGGCAGCACCAGTAGTCAAAATGGTAGAACCACTATTTGAGTTGATTGATTTTGAAGAAGAGATTAAAGTGGAAAAAATTTCTAAGGAAGAATCCTCAGAAACATATTCATATTCAAACTCTAATGATTCCCATTCgagtgaaaattcaaataaatcttcAAAATCAGATGCGTGTATTTTACCTAGACGAAACCCAAGTAGAAGAATTTCTCTTAGAGATGAAGTAGCCACAAAATTGATTTCTGAAaaagtaaatgttaaaaaagaggTTAAAAAAAGttTTCCTACAAACAGGAACACGAGAAAGGTTCGTGGtcgaaaaacacaaaaaagtttGAACTCATTAACGAACGAGAGctctttaaatttagaaaaagacatttctaaaattgaaaaaagtacaTCTATTACCTTATCACACGTGCCTACAGAAAACCAAGAGAATGAGGTTTCAACTTCTGAAGAAAGTATAAATAATGACAAACCTATCGAAATTCCAAAACCTACCACATTGCTAACTGACAATTCAAGTGAAAGCGgtgtttcaaacaaaaataatgagcCAGTTATACAAGAAATACTTCAAGGAAAAGCATCTGAAAAATGCgaaaatgaaagtaataaaaCATGTAACATTCAACAAGTCAACGACTTAGAGCCATTAATTTGtactgaaaaagaaaattcaatcaaTATGTCCCAGgaaatttcaagtaatattCCCATGCCATTATTACCAGAAGAGCAGAACAACGTAGTTCAAGAGGCGGAATCTAAAAGTCCAATGCATGAAACACAAAATCATATTCACGAAGAAAACTTAGAAAAAGACATAAATATTTCCACATCTAGTATTGAGAAAATTCCAGATAAACAGTTAGAGGAATATACAGTAAAAGATTGCAATATTGCAGATACAAAGTCTGacattaaaaacacaaatattactgatataaaaattgaatcaaaaactaTGGATGGTCTAAACGAAACTAATTCGGATTctgaagaaattgaaaataaacacGAAATTTCAAAGACCGACATCAGCATTTCAGAAACAAGTATAGAGACCAAAATAGAACTAACGACAAATATTAAGATTGAAAATGAAATCGATATTCAAAAAACAGATTTGGATGAAACTATGaacgaaaaagaaattttgtcagatgaaaaatcttttactgaaaacaaaattgaaattaactcCAATGAAGacgtaaaagaaaagaaaatttccgaAGAGAAAGTATTTTCTAGTGATGAAAGTAAAACTAACGGTTTTGATAATTCGAAACAACGCTTTTTTATATTTGGGGATGAAATCGAAGAAGAATGTTCTTCTTGTAAAATAGGAAtggaaacaaaagaaatttccaAGGTAAACGAGCAAATTTGTGGTGAAATCATACATAAAACGCAGGaggatttttcaattaattgttatatgtgTTGGGATGAAAATAACTGGaccttcaaaaaattcaatgatttaaaacttttttcaacacACCTCAACACAGAACATACAAATGATGAAATTAGTTTCCAAAACAAACGTGGTAACTCATATTCTTTAGATTTTGTTAACGAAAATTCTTGCGTGATGCCGCAGTCTATGTGGTTtggaatttataatgaaatgatTATGTTTAAGTGCGGATTTGCAAAAATTGATACAAATGGTTACATACTCTACTCGTGCTTAGAATGCCAgcatgcttttaaaaattttaatacttttacaaaGCATATTTTGGGAAGGGAAACTAAAgaacaaAAAATTGGTGAACATGAAGAAAACATGAGCCCAATAGTATCCGACAATATGTCTGTAAGCTCAACAAATAAAAGCGACATAAAAGattgtgaaaaagaaaaatcatacgTTAAAAATCCGGCATTAATCGAAAGTTGTAAAGAATTTGCAAAGGAAATTGaatgtaataatattgataacgaaaataataaggaaacttctcaatttaaagagaaaaatgaagaTAATGCCGATAATAACCAAAATTCTATGCAAGAGCCCCATATTTTTTTACCGAAACCTAAAAGTATTTTAGAAAGTATTTTAGAATCagcaaaagtaaataaagaaaattcagaTCAGGAAGATAAATCGCCAACTTTACTGCTCGAAAGCATTGACCCAAATGTAAATATtccaactgaaaaaaaaattgaagaaaatcttCCTGATTTGGTATCTCAtgctgaaattaataaaaaatctagcAATGAAGAACACGTTCCTGACACTTATAATTATAAGCAAATAACAACTGCACTTTTCGACATTTTCAAAGAGGGTGAAGAAGAGCCAGCTAGTtctaagttaaataaaattttatcagttgGAGAGAGTTATCGCAGtatcaaagaaaaagaaaaaatggattTAGAAGAaagggaaaaacaaaaaatattaagcttAAGCATTCAGAAAGATACTAGACCTAGAATTGAAGGAGCTAACATTGTTACAAAACATATTCTTGATTTAAATGACAAACTAGCTCTTTTAACTTGTAAATATTGCAGTCGTCGTTACACTTGCTTAACAAATCTTAGAGAACATTTCCGAATTCATGTTGGTGATCGAATGGTTATATGTTATAAGTGCAAGCgtggtttttcaaaaaaaagtaatcTAGAAGaacatataaacatttttcatctCGATTCTTCTGATAAGAACATCGACTTAGACGTTCTAGGCGACAATCGGaaagaaatagcaaaaaatactaatataacagtaaatgaaaataatccaAAAGAAAAGGGtttcaaatgtaaatattgtatTCGTTTTCTGTCGAACCGCACAGTTTTAGAGGATCACTTACGTCTTCATTTTGGTGAAAAACCTTTAAAATGTGAGAAATgtgatttgcaatttttaaaaaagtctaTTTTCGATAATCATGTAATGGAAGTGCATGAACTACGAGAAAATGACGGTcccttagaaaattttgaaggttcttgtaacaaagaaaataataaggcattttcaaataaagcgaaaaacaaatttaaatgtaaacaatGTCCAGAAACATTTCCAACAAAAGTAGGTTTAATTGAACATTTAATTATGAACCACAATGATGGCGAATTCAAATGCAGATTTTGTGACCTAAGATTCAGTTCGAAAAAGAAACGTTCCTATcatgaaaaattgcataaggATGgagcaaaatttcaatgtaacTTTTGCGAtcaatgtttttcaaatttgtttagtTTAGAAACCCATGAAAGTTCCCATAAAATCAATGCAGACTTTAAATGTAGATTTTGTGATCATTATTTTGCTTCTGATAAAACAAGGATTTTACATGAGGAAATGCATGAAACCACTGGTAAATCTAATAACAATATGCAAATTCAAACAGTTGATATAGCTACAATATTACAAATGAATAATGAACAGGCTCCAATAAATTCAAATGGAAATGCAAATGATTCAAATGGTACTTCTAGTGATGCTACAGATCGATCGTCAAATCAAAATACTGCGTCAAAGAATTTAATgGTTGATTTTAAACCCAAAATAGAAATTGTTTCTGATGTTACTTTAGCCCCAACTGAAActatggaaattttaaacaacttcTTCAAAAGAGATTTGCCAGAAATTACTGTTACTACAACAAGCGACGacgaaagttttcaaaaaattggtgTAAATgatatcgaaaaaaatttggCAGCACATGTATTACGTGATACGGATCCGTATTACCAATTGATGGCTGACTTTAGCTATCAATACCAAATGTATCAAATGCAATCTGCGCTTAAAATGGAGAATATGAACTTTGCCGAGATATCACCTAATAACATTACTTCTGGAGACAGCGAAATATTTGATAGGCCAAAAAAGAgtagaaagaaaaaacttaCTATTGAAAAAGTAGAAAGTACTATTGAAACAAGCAAAACTAATTTGTCTTCACCAAATGATCAAAACgatttgtatatagaaaataaaaatattgaattagaaaatCCGCCACAagaattattgcaaaataaaatgcaattaactCAACAGGACAATCTTAATACTTCTAAAGATCCTATAAAGAAAAAGGACAAGAAAAAGCTTATACCAGATAATAATAAATCGCTTAcgaatgtatttataaaatgtgaatattgcaataaaaaacttaacagtagtgataaaaaattattgagccGTCACAGACGTTTGCATATCGCTGGTGATACACACAAATGTTCTTTTTGTAATAAGTGTTTTGCAACCCTATATTATCTAGATAAGCACTTAAGAGTTCATCATTTAAATAAGGTAATACAATACCAATGCCCATCATGCGATTCAGTTTATGTACTGAAAGAAGCTTTGCGTAGACATGAACAACGTGCTCATAAGGAAAACAATTCAAATCCAAAAATTGAAAGcaaagaaaaggaaattaataAGATCGATGACAACATAAACAAAACTAGTGACATCGACTCGTCTTGTTTGGAAAGTAACATAAATGATATTGGGGATAATCAATTTAAAGATCAGGAATTTGCAATTCCTGAAATtcctaaaaaaacaaataaaagatcAAGAAAACACAGGAAAGAGCATGATCTTTTACCAGTTGATAAACAATATCGTTGCGATCAATGCTTCAAAGATTTTTCAACACCTACAATACTAAAAATCCATCAAAAATTACATCAATCATCTGTTGTAGCAGCTGCAGCTGATTCCCAAACTCCAGATCCtcaaaaaacttcaaaacttAAATTGTATACTTGCGAACAATGTGATAAACGTTTTTCGATCGTTACTTATcttaataatcatttaaaaaaagttcatcaggtaaaattatttgtatgtgaACACTGCAAAATGGAATTTCGTAACGAAAAAGATTTACAAGAACACAGTAAAGTTCATTTAACGGGAAAAAAGTTTATCCGAGTTGAAAAAACACATTTAGACCGGCCTTTCAAGTGTGAACTTTGTGGTAATTCTTACGCAATATTAGCATATTTGAACAATCATTTGAACAAGGCACATGGCAATGAAGAAACATTAGATGAACCGAAAAAGGAAGATTTGAAAAACAATCATGCTATGTCAAATACTAATGGAAACAGTGATTCTTTTGAAGTTTCAAAAATTGACAATGctgatatgaaaatgaaaacggAAAACGAAGTGGAAACAAATACGACAGTAGGAAATAACGATTCAACGTTATTCTTGAATTCAcaaaatgcgaaaaaaaataacagtatcAAATGCGATCACTGCTATCTGAGATTTATAagctcaaaatatttaaaagaacacTCAAAAATGCATTTGGATCCAAATGATTCGTCTCGAATTGAAATGCTAGAAAGTGCTTTTAATCCCCAAAggtcagaaaaaattttaaagccgaTCATAAATAGTGGAAGATCCAacagcaataataacaataccaACAGTCAATCTCaacagcaaaaaataaaagcaaagaaaatttctgttcctaagataaagaaaaaaccaaagaaaCAACCCAAGCTCAAAACTAAAGCATACGATGAAGATTCTAGTAGTTCCGTGGAATTGATTGAAGTTTCTGAACCTCCAGATATTCCAGAGCATAATCTCAGTTACACTCAAATAACAGAGGCTCTTACATCAGCTTCGTCTGGTTTAACCGCTATTCAACCTGTCGAGGTAATAGAAAGCCCAAACGATGATGATCAACAAATGACAACAGAACTCACACCACTAACAACGCTTACATCTCTATCAAGTTTGACTCCTTTAACCCCCCTTCAACCAACAGCAGTTTTTCATCACTCCAGTAATGATACAAGTGTTCTTCAGTCTCAGCAACAATCGCAATTGCAGGTAACGAACTCGGCGATGGAATTAACATCTCTTGAACCATCAACAATATCAGAAGCGACAAAATTATCCTTAACACTTTTGGAACCTTCGGCATTATGTGAGTTAACTGCTTTCACTGAACCATCAGTAGTTCCTATGCATACTGCAAACTTAACTGATCTTACTTCACCTTACGATCAGTCAACTAGTATCTTACACCATGACCATACAATACTCGGAGATTTAGCATCTTCGTCAACAACATCAACGTTTGAAGCGCAATTAATCACAACTCAATGTAATAACTCTTCTGCGACGTTAAACACGTCATCGGCTTCTTCTGATTATGCTGTTACCAATATGGATACATCGCAAATTACGCAGCAATCAAAGAAACCTAGAATTTCAGACTCAAACATGCATTTAGAAAGCTTTACAATGCTAGATGACAACTCAAGTCAAACAGAACACAATTCACAATCGGAATTAAcgaatttttcaacatttgacTCAACAACAGCCTTTTTATCAACAAAAACTGATCAAAATATGATGTTCACTGATTTAAATATGTCGACCAAGTCAATAATGTCGGATAGTGCATCCCTAGAGCCATTAACATACTCAGATTCAATGCCGTTGTCCGAAGCAACCACAATCCTAGAACTTACTTCTTCATCACAGCCAACTAGTTCATCAGAAGCAACTGCATTTTCAGAATCCAATAATAACGCTACACTTATACAAAGCTCTTCTGGAAAGAAAAAACGTAACAGTGGTGGCAAATCACGTGGTCAAAGACCAACtgattctgaaattttaaatttagaaggaGATTTTGATATGTGctgtgaaaacaaaaatttcaagtgcACACTTTGTCAACGAGTTTATGATTCATGGACGAAATTTCGCAAGCATAATGAATGTCATGCTTTGAGGCCTCATCAATGTCCCATTTGTCCATGCAATTTTAAAACAGATGAAGAGCTCTTTGAACATAAAGCAGCCCACGAAAGATCTGAAAAAAACTTCTCCTGCGAAATATGCAACAGAGTTTTCATATCTAAATCACGCTTAAAAGCACATATGTTAACAGTACATAATGAGGAGAGAGAATATAAATGTGAATACTGCCCCTCCGCTTTTAAAACTAAAAGCCGACTTGTTGATCATACCCGATGTCATACAGgtgaaaaaccaataaaatgcCATTATTGTGATGAACATTTTTCAAGAGCTGCTTACCGTTTAAAACACGAACGAGCTTTACATCTTGAGTTGTTGGAAATTgacttaaaaaacaaagaaggcaaaaaagaaaaaaagaattaa
- Protein Sequence
- MTKVAAPVVKMVEPLFELIDFEEEIKVEKISKEESSETYSYSNSNDSHSSENSNKSSKSDACILPRRNPSRRISLRDEVATKLISEKVNVKKEVKKSFPTNRNTRKVRGRKTQKSLNSLTNESSLNLEKDISKIEKSTSITLSHVPTENQENEVSTSEESINNDKPIEIPKPTTLLTDNSSESGVSNKNNEPVIQEILQGKASEKCENESNKTCNIQQVNDLEPLICTEKENSINMSQEISSNIPMPLLPEEQNNVVQEAESKSPMHETQNHIHEENLEKDINISTSSIEKIPDKQLEEYTVKDCNIADTKSDIKNTNITDIKIESKTMDGLNETNSDSEEIENKHEISKTDISISETSIETKIELTTNIKIENEIDIQKTDLDETMNEKEILSDEKSFTENKIEINSNEDVKEKKISEEKVFSSDESKTNGFDNSKQRFFIFGDEIEEECSSCKIGMETKEISKVNEQICGEIIHKTQEDFSINCYMCWDENNWTFKKFNDLKLFSTHLNTEHTNDEISFQNKRGNSYSLDFVNENSCVMPQSMWFGIYNEMIMFKCGFAKIDTNGYILYSCLECQHAFKNFNTFTKHILGRETKEQKIGEHEENMSPIVSDNMSVSSTNKSDIKDCEKEKSYVKNPALIESCKEFAKEIECNNIDNENNKETSQFKEKNEDNADNNQNSMQEPHIFLPKPKSILESILESAKVNKENSDQEDKSPTLLLESIDPNVNIPTEKKIEENLPDLVSHAEINKKSSNEEHVPDTYNYKQITTALFDIFKEGEEEPASSKLNKILSVGESYRSIKEKEKMDLEEREKQKILSLSIQKDTRPRIEGANIVTKHILDLNDKLALLTCKYCSRRYTCLTNLREHFRIHVGDRMVICYKCKRGFSKKSNLEEHINIFHLDSSDKNIDLDVLGDNRKEIAKNTNITVNENNPKEKGFKCKYCIRFLSNRTVLEDHLRLHFGEKPLKCEKCDLQFLKKSIFDNHVMEVHELRENDGPLENFEGSCNKENNKAFSNKAKNKFKCKQCPETFPTKVGLIEHLIMNHNDGEFKCRFCDLRFSSKKKRSYHEKLHKDGAKFQCNFCDQCFSNLFSLETHESSHKINADFKCRFCDHYFASDKTRILHEEMHETTGKSNNNMQIQTVDIATILQMNNEQAPINSNGNANDSNGTSSDATDRSSNQNTASKNLMVDFKPKIEIVSDVTLAPTETMEILNNFFKRDLPEITVTTTSDDESFQKIGVNDIEKNLAAHVLRDTDPYYQLMADFSYQYQMYQMQSALKMENMNFAEISPNNITSGDSEIFDRPKKSRKKKLTIEKVESTIETSKTNLSSPNDQNDLYIENKNIELENPPQELLQNKMQLTQQDNLNTSKDPIKKKDKKKLIPDNNKSLTNVFIKCEYCNKKLNSSDKKLLSRHRRLHIAGDTHKCSFCNKCFATLYYLDKHLRVHHLNKVIQYQCPSCDSVYVLKEALRRHEQRAHKENNSNPKIESKEKEINKIDDNINKTSDIDSSCLESNINDIGDNQFKDQEFAIPEIPKKTNKRSRKHRKEHDLLPVDKQYRCDQCFKDFSTPTILKIHQKLHQSSVVAAAADSQTPDPQKTSKLKLYTCEQCDKRFSIVTYLNNHLKKVHQVKLFVCEHCKMEFRNEKDLQEHSKVHLTGKKFIRVEKTHLDRPFKCELCGNSYAILAYLNNHLNKAHGNEETLDEPKKEDLKNNHAMSNTNGNSDSFEVSKIDNADMKMKTENEVETNTTVGNNDSTLFLNSQNAKKNNSIKCDHCYLRFISSKYLKEHSKMHLDPNDSSRIEMLESAFNPQRSEKILKPIINSGRSNSNNNNTNSQSQQQKIKAKKISVPKIKKKPKKQPKLKTKAYDEDSSSSVELIEVSEPPDIPEHNLSYTQITEALTSASSGLTAIQPVEVIESPNDDDQQMTTELTPLTTLTSLSSLTPLTPLQPTAVFHHSSNDTSVLQSQQQSQLQVTNSAMELTSLEPSTISEATKLSLTLLEPSALCELTAFTEPSVVPMHTANLTDLTSPYDQSTSILHHDHTILGDLASSSTTSTFEAQLITTQCNNSSATLNTSSASSDYAVTNMDTSQITQQSKKPRISDSNMHLESFTMLDDNSSQTEHNSQSELTNFSTFDSTTAFLSTKTDQNMMFTDLNMSTKSIMSDSASLEPLTYSDSMPLSEATTILELTSSSQPTSSSEATAFSESNNNATLIQSSSGKKKRNSGGKSRGQRPTDSEILNLEGDFDMCCENKNFKCTLCQRVYDSWTKFRKHNECHALRPHQCPICPCNFKTDEELFEHKAAHERSEKNFSCEICNRVFISKSRLKAHMLTVHNEEREYKCEYCPSAFKTKSRLVDHTRCHTGEKPIKCHYCDEHFSRAAYRLKHERALHLELLEIDLKNKEGKKEKKN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -