Basic Information

Insect: Condylostylus longicornis
Gene Symbol: -
Assembly: GCA_029603195.2
Location: JAQSLO010000134.1:16053149-16056418[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 3.5e-05 0.0038 18.3 2.9 1 23 371 393 371 393 0.98

2 18 0.00029 0.031 15.4 0.3 1 23 399 421 399 421 0.97

3 18 1.2e-05 0.0013 19.7 1.3 1 23 427 449 427 449 0.98

4 18 1.9e-05 0.0021 19.1 3.1 1 23 455 477 455 477 0.97

5 18 3.5e-05 0.0038 18.3 4.5 1 23 483 505 483 505 0.99

6 18 0.022 2.4 9.5 7.6 1 20 511 530 511 533 0.90

7 18 7.8e-07 8.5e-05 23.5 4.6 1 23 539 561 539 561 0.98

8 18 2e-06 0.00022 22.2 2.8 1 23 567 589 567 589 0.97

9 18 5.9e-05 0.0064 17.6 6.8 1 23 595 617 595 617 0.97

10 18 0.00043 0.046 14.9 6.6 1 23 623 645 623 645 0.97

11 18 3.9e-06 0.00042 21.3 4.5 1 23 651 673 651 673 0.98

12 18 9.1e-06 0.00098 20.1 8.1 1 23 679 701 679 701 0.98

13 18 5.5e-06 0.00059 20.8 8.0 1 23 707 729 707 729 0.98

14 18 8.3e-07 9e-05 23.4 7.7 1 23 735 757 735 757 0.98

15 18 0.00026 0.028 15.5 9.5 1 23 763 786 763 786 0.95

16 18 0.00016 0.018 16.2 0.4 1 23 792 814 792 814 0.97

17 18 0.00071 0.077 14.2 4.4 1 23 824 846 824 846 0.99

18 18 2.3e-06 0.00025 22.0 3.1 1 23 852 875 852 875 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	3.5e-05	0.0038	18.3	2.9	1	23	371	393	371	393	0.98
2	18	0.00029	0.031	15.4	0.3	1	23	399	421	399	421	0.97
3	18	1.2e-05	0.0013	19.7	1.3	1	23	427	449	427	449	0.98
4	18	1.9e-05	0.0021	19.1	3.1	1	23	455	477	455	477	0.97
5	18	3.5e-05	0.0038	18.3	4.5	1	23	483	505	483	505	0.99
6	18	0.022	2.4	9.5	7.6	1	20	511	530	511	533	0.90
7	18	7.8e-07	8.5e-05	23.5	4.6	1	23	539	561	539	561	0.98
8	18	2e-06	0.00022	22.2	2.8	1	23	567	589	567	589	0.97
9	18	5.9e-05	0.0064	17.6	6.8	1	23	595	617	595	617	0.97
10	18	0.00043	0.046	14.9	6.6	1	23	623	645	623	645	0.97
11	18	3.9e-06	0.00042	21.3	4.5	1	23	651	673	651	673	0.98
12	18	9.1e-06	0.00098	20.1	8.1	1	23	679	701	679	701	0.98
13	18	5.5e-06	0.00059	20.8	8.0	1	23	707	729	707	729	0.98
14	18	8.3e-07	9e-05	23.4	7.7	1	23	735	757	735	757	0.98
15	18	0.00026	0.028	15.5	9.5	1	23	763	786	763	786	0.95
16	18	0.00016	0.018	16.2	0.4	1	23	792	814	792	814	0.97
17	18	0.00071	0.077	14.2	4.4	1	23	824	846	824	846	0.99
18	18	2.3e-06	0.00025	22.0	3.1	1	23	852	875	852	875	0.97

Sequence Information

Coding Sequence: atgaaTTCTGAGCATTCTACTGAAGCTGGCACAAGTTTAGAAACGCGACAACAATTACAAAGACATTCACCACCACATCAATTAACAAACCGCCATGAAAATCAAACAAATGAATTAGGAAAATACTGGGTCGTTACAAATTTGGTGTCAGGATCTAATTCAAGCCAAAATAATTATGGTTCTTCTCCAGTTACTACAACAGTTTCTACTTTACCACCTCCTATATCTTCAACGCACTCTTCAAAATCTAGTAGCGTTATAAAATCCGATATGATAAAACAAGAAGATGTGCGTCATACTCCAGTTTCTTCAATAAACAATGGCACAAATCCAATGCAGCTAACAAATTCCATAATGCATACCTCAAACAATTCTCATCAATTAGCAAATGGGACAATAATTACAGCAAACAACTCTTCACAACAACTTCATCATCATCCTGTTCAAATTAATCCGGAAGTTGTCATAATGGAACACGCGTCAGTTGAAAAATCAGTTGAATCAAACAATGGAGGAAGTAAAATTGGAGACATCAGATCTGCGCAtaatataaatcataataatgaaCAACAGAATCTGTCCATTGAAAGGCATATACCAAATTCTATTATAGATTCtataaagcaagaaaaaatGTATACGAATATTAAACCGGTAACTACGGGTATCGATACCCGACCTCAAGCTTTAAATATTGATAGCAAAGCTAATGTTCAACATTTAATTGAAGCCAGAAATTCGGAGGGTCAGTTAATTAAAGTGCAACCACCAGAACATGAAATAGGAAAACAACCACTAGGCGTTGAAATGTACAAAGTAAATATAGAAGATTTAAGTCAATTTTTGTCATATCACGAGGTGTTTGGTAAGATTCATGGTGATGTAATATCTCATCCAACGCCTCAATTGTCAACTAGCCATCACCAAGGAAATGCTtctgaaaataataatcaaaatattcaacaagTTCTCTCAATTCCCACAACGTCAGTTTCTAATGTTAACACAACCAACCCCAATGAATTAATAATGCCTAaaatggaaaatcaaatttcaggCCAAAATACAACCAATTTTGTAGGTTTGGAAGGAAATGCTAACGGAACCACACATACGTGTGATATTTGCGGTAAAATGTTTCAATTTCGTTATCAATTGATAGTCCACCGGCGATATCACAACGAACGCAAACCATTTAACTGTCAAGTTTGTGGTCAAGGATTCCAAACGTCCCAGGATTTGACACAACATGGAAAAATTCATGCTAATTGTCCGATGTTTACTTGTAATGTTTGTTTTCATGTTTTTGCGAATGCACCTAGTCTTGAACGCCATATGAAAAGACATTCTACAGATAAACCTTTCGCATGTACAATTTGTCAAAAAACTTTCGCCCGCAAAGAGCATTTGGATAATCACTTCCGAAGTCACACTGGCGAAACTCCATTCAGATGTCAGTATTGTGCTAAAAGTTTCACAAGGAAGGAACATATGGTGAATCACGTAAGAAAGCATACTGGTGAGACACCACATCGTTGCGATATTTGTAAGAAATTCTTCACAAGAAAAGAACATTATGTGAATCATTGCATGTGGCACACTGGAGAGACTCCGCATCAGTGTGAGCTTTGTGGGAAGAAGTATACTAGGAAAGAACATTTGGCAAATCATATGAGATCTCATACTAACGAGACTCCTTTTCGTTGCGAGATATGTAAAAAAGCTTTTTCCCGTAAAGAACATTTTACTAACCACATTTTGTGGCATACGGGTGAAACACCTCATCGCTgtgatttttgtcaaaaaacttTTACTCGAAAAGAACATTTGTTAAATCATGTTCGACAACATACTGGTGAATCTCCCCATCGATGCACGTATTGTATGAAGACTTTTACTCGTAAAGAACATTTAGTGAATCATGTTCGACAACATACTGGTGAAACTCCTTTCAAATGTACTTATTGTACAAAGGCTTTTACGCGCAAAGATCATATGGTTAATCATATCAGGCAGCATACAGGTGAATCACcgcataaatgtacatattgtacAAAAACTTTTACTAGAAAAGAACATTTGACAAATCATGTTCGTCAACATACAGGGGAATCTCCACATAAATGTACGTATTGCAAGAAAACCTTTACAAGAAAAGAACATTTAACTAATCATGTGAGATTACATACTGGTGATTCGCCGCATAAATGTGAGTACTGTCAAAAAACTTTTACCCGTAAAGAACATCTGAATAATCATATGAGACAACATTCAAGTGATAATCCTCATTGTTGTAATGTTTGTAATAAACCGTTTACAAGAAAAGAGCATTTAATAAATCACATGTCACGATGCCATACTGGAGATCGCCCATATGCTTGTGAAACATGCGGGAAATCTTTTCCtctaaaaggaaatttattatttcatcagAGAAGTCATACTAAAGGTCAGGATCAGGAGCGTCCTTTCAAATGTGACAAATGTCCAAAGGACTTTATATGTAAGGGCCACTTAGTGTCACATATGCGATCACATTCTGGTGAGAAACCCCATAAATGTACCTTATGCTCAAAAAGTTTTGTTGAGAAGGGCAACTTAAAACgtcatatgaaaataaatcatCCGAATGCTATATTGACCCCAACCGGTATTGTTACGactataaaaactgaaaatatggtaaatacaacaacgacaacctcaacaacaacaactaaaCCACAGTATCTTAATGAAAGAATTCCGaccttaaataaaacaaatatattaccAGTGAATAGTCTCATAAATTCGCATACCATGCATACAATTCAGCAAATAACttcaaatacacaaaataatagtGGTAGTTCCAATGCAAATAATCAGCAAGTTATTCCAATGGATACGGCAGTCGCAGCACCGCCTTCACATACTGGACAACCAGAACGTTTGCAGCAAGAAACAACacagcaacagcagcaacaacaatcaACACATTTGCAACAATCATCACAACAACATCAGCAGCATCCTCCACCTCAGGTTCATCAGCATTctaaacaacagcaacaaccaTTACCTCATATACATCAAAATCATCAACAAATTCCTCATATTCAACAAAATCAACAACGTCACCTTCAACCACCTCAAAATCAAGAAAATGCAAATGATCAACAACAATCTATTGGAATAATTCAAACAAATGCAGATAATTCAAATCGAAATCAATTGCAACAAATACACCATATTGCTTCCAATGAACAAAATCCAGTTggttattaa
Protein Sequence: MNSEHSTEAGTSLETRQQLQRHSPPHQLTNRHENQTNELGKYWVVTNLVSGSNSSQNNYGSSPVTTTVSTLPPPISSTHSSKSSSVIKSDMIKQEDVRHTPVSSINNGTNPMQLTNSIMHTSNNSHQLANGTIITANNSSQQLHHHPVQINPEVVIMEHASVEKSVESNNGGSKIGDIRSAHNINHNNEQQNLSIERHIPNSIIDSIKQEKMYTNIKPVTTGIDTRPQALNIDSKANVQHLIEARNSEGQLIKVQPPEHEIGKQPLGVEMYKVNIEDLSQFLSYHEVFGKIHGDVISHPTPQLSTSHHQGNASENNNQNIQQVLSIPTTSVSNVNTTNPNELIMPKMENQISGQNTTNFVGLEGNANGTTHTCDICGKMFQFRYQLIVHRRYHNERKPFNCQVCGQGFQTSQDLTQHGKIHANCPMFTCNVCFHVFANAPSLERHMKRHSTDKPFACTICQKTFARKEHLDNHFRSHTGETPFRCQYCAKSFTRKEHMVNHVRKHTGETPHRCDICKKFFTRKEHYVNHCMWHTGETPHQCELCGKKYTRKEHLANHMRSHTNETPFRCEICKKAFSRKEHFTNHILWHTGETPHRCDFCQKTFTRKEHLLNHVRQHTGESPHRCTYCMKTFTRKEHLVNHVRQHTGETPFKCTYCTKAFTRKDHMVNHIRQHTGESPHKCTYCTKTFTRKEHLTNHVRQHTGESPHKCTYCKKTFTRKEHLTNHVRLHTGDSPHKCEYCQKTFTRKEHLNNHMRQHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRPYACETCGKSFPLKGNLLFHQRSHTKGQDQERPFKCDKCPKDFICKGHLVSHMRSHSGEKPHKCTLCSKSFVEKGNLKRHMKINHPNAILTPTGIVTTIKTENMVNTTTTTSTTTTKPQYLNERIPTLNKTNILPVNSLINSHTMHTIQQITSNTQNNSGSSNANNQQVIPMDTAVAAPPSHTGQPERLQQETTQQQQQQQSTHLQQSSQQHQQHPPPQVHQHSKQQQQPLPHIHQNHQQIPHIQQNQQRHLQPPQNQENANDQQQSIGIIQTNADNSNRNQLQQIHHIASNEQNPVGY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00160970;
90% Identity: -
80% Identity: -