Basic Information

Insect: Condylostylus longicornis
Gene Symbol: lov
Assembly: GCA_029603195.2
Location: JAQSLO010000018.1:3293629-3318124[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 3.6e-18 7e-15 55.2 0.0 1 44 671 714 671 715 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	3.6e-18	7e-15	55.2	0.0	1	44	671	714	671	715	0.96

Sequence Information

Coding Sequence: ATGGAGAAATTCGCTAAAAGTTTAGAAACCATGACAGCGACACAAGATCATTATAGTCTCCGGTGGAATAATCATCAAAATCATATATTAAGAGCGTTTGATACTCTGCTACAGACAAAAGCTCTAGTAGATGTTACATTAGTATGTGCTGAAACGAGTATACAAGCTCATAAAATGGTTTTGTCAGCATGTTCACCATTCTTTCAGCGTGTGTTTGCTGAAACACCATGTAAACATCCAGTTATAGTTTTAAAAGATTTCCGAGGATGGGTTGTTCAAGCAATTGTTGATTTTATGTATCGTGGTGAAATTTCTGTGCCACAAGAGCGTCTTCAAACCTTAATACAAGCTGGCGAATCACTACAGGTGCGGGGGTTAGTTGAAAATAATGTACCAGAAAACAACCCAACGCCTGCTGCTTCACCGGATGATTTTGGTATGTTAGATACATCATTGCTATCATCAGAATATGGTCGGTGTTCAAGTAGCTTTGACGAAGAATGTCCAACAATGGTTAATAACAGTGGTTCAAAAATAATGCTCTCACAACATATGTTCTCTGCAGCAGCGATGGCTGTTGCAGCTTCAGCATCAGCATCAGCAACTGCAAATACTCCAGAAACAAATAGAGAATCATCAACACAATTGAATAGTTCAAGATCAGATTTATGTACATCACCAATGCCAAGAAGAAAACAAGCACGACCAAGAAGAAGGTCTGGCGAATGTCCTGTACCAGATTTAAACACAAATAGTAAACCAAATACTCCGGTGCCAGAAAACAACCCGGCAGGTGATGAGCCTTTagaaaatgataatgatgaagaCGAAGAAGAAGCAGAAATAGAAGAAATTGAAGATGAAATTGAAGATGTTGAAGATCATGTTGAAGCTATCAAAATCGAAGTAGATAAACATCGAAATTTAGTCGAAAATACCGAATCAGAAAAGAAAACGTCTGACCATGAAACAACCCCAAcggaaaatgttgaaaatgtaATTGATGATAACGTTATAAACTTAAGTGAACCAGAAAGGCCGCCTGAAGAAATTAGTGACGAAATCAACCTAAATTTGAATAAGAGGCAAAGTTGTAGTCCTTTAGATGGTCCCGAAAATTTgtgtacaaaaaagaaaaaatccgaCGACGAGGTAGAGGCGGAAACGAATAATGAcgttaattcaataaaatgccCTGAAAATGATGGAAAGGAGCAGAATGAACAAAAACAGAAAGAGGATAGTGCTAACAATAACACGCCAAATAACAATCGAATTGTATTATCTTTAAAAGATATTCGACATTTGAATAAACAAGGAACTGTTCCACCTAGATCTCCTCCCAATCCATTTCAACCGCCACCTGATTTAATAAGACCACCGTCACATCATCGTGAACCACATTTACGCGATCACAGCCGAGATAGTATGAAAAACGACAATTTAGATATGCTTCGTAATCCAATGGAATCAATTCCAGATCACGGTAGTCCTTTAAATTTTGACCATATGGATTTATCCATGGCTGCAGCAGCAGCAGCTGCTGCAGCACACCATCatcaaaatcaaatgaattcaAACCATTTATTAGGTCCTGGAGGACCACATCACCATCCATTACCACCACCTCCACCACATCATCATCGTGGTCAATTAGAACGTTTAGAAGAAAGTTTAGCCAACcgtttaaataaagaatttgcaCCAAGCTCACCTATGAGTTTACCACCGCATTTTAATCCGTCAGATGGACCACCACATCCACCATCACCATTACCTTTTCCTGGAATGTCATCGGCTTTAACACTTACACCACCTCACAtgttTGGATTAGATTCACCATTAGGGTTATTTCCACCTGGCATGGATCCAGGAAAACTTTACAATCCATTAATGGATATTACAGATCCACGTGATTTACCTGGCAATCATCCAccttttatgaaaaagaaaatgcCCCGGCCCAAAGGTCAACATTCTGCTCCACGAGGTGGCCCACCACGTTCATGGACAAATGCTGAATTAACAGAGGCATTGCAACAtgtatggaataaaaaaatgacAACAAGTCAAGCTTCAAGAATATTTGGAATTCCTTACAATTCGCTTTTAATGTATGTACGAGGGAAATAtggaaaaagtttaaaactagAACAATTAAGAAAAGACTGTATTTCTGGACCACCTATTGAACTTTTACAAATGGGAATTAATAATAGTAGTGGTAATAATTCTGGTGGCAGTAGcagcaaaaacaataaaaatcatcatcatttaaATGATAGTAGATCAAAGGAATtaaatgaattagaaaattcaatacatagaaatttacaaaatgaagcTGATTTATTACAAGGTGCAAATCCATTATTCAACCCGTTTCCACCTGGATTTTATCCAGATTTTGGTGGCGGTTTTCCTGGATTACCCCTtggaatgttaaatttattaccaCCCGAAAGACATCCGCCATCAtcttcatcttcatcatcatcggCTGCGGCTGCTGCAGCTGCTGCAGCTGCTGCCgcattacatttaaatatggaTGAAGATTGTAAATCGGATCGTTCTAAGCAATCATTAGAAGATGATTTTCCACAACCATTAGCATTAAATCGTGATTTAGATAGACGGGAATTACTGATGCAGCCGAATGGGCaagattga
Protein Sequence: MEKFAKSLETMTATQDHYSLRWNNHQNHILRAFDTLLQTKALVDVTLVCAETSIQAHKMVLSACSPFFQRVFAETPCKHPVIVLKDFRGWVVQAIVDFMYRGEISVPQERLQTLIQAGESLQVRGLVENNVPENNPTPAASPDDFGMLDTSLLSSEYGRCSSSFDEECPTMVNNSGSKIMLSQHMFSAAAMAVAASASASATANTPETNRESSTQLNSSRSDLCTSPMPRRKQARPRRRSGECPVPDLNTNSKPNTPVPENNPAGDEPLENDNDEDEEEAEIEEIEDEIEDVEDHVEAIKIEVDKHRNLVENTESEKKTSDHETTPTENVENVIDDNVINLSEPERPPEEISDEINLNLNKRQSCSPLDGPENLCTKKKKSDDEVEAETNNDVNSIKCPENDGKEQNEQKQKEDSANNNTPNNNRIVLSLKDIRHLNKQGTVPPRSPPNPFQPPPDLIRPPSHHREPHLRDHSRDSMKNDNLDMLRNPMESIPDHGSPLNFDHMDLSMAAAAAAAAAHHHQNQMNSNHLLGPGGPHHHPLPPPPPHHHRGQLERLEESLANRLNKEFAPSSPMSLPPHFNPSDGPPHPPSPLPFPGMSSALTLTPPHMFGLDSPLGLFPPGMDPGKLYNPLMDITDPRDLPGNHPPFMKKKMPRPKGQHSAPRGGPPRSWTNAELTEALQHVWNKKMTTSQASRIFGIPYNSLLMYVRGKYGKSLKLEQLRKDCISGPPIELLQMGINNSSGNNSGGSSSKNNKNHHHLNDSRSKELNELENSIHRNLQNEADLLQGANPLFNPFPPGFYPDFGGGFPGLPLGMLNLLPPERHPPSSSSSSSSAAAAAAAAAAAALHLNMDEDCKSDRSKQSLEDDFPQPLALNRDLDRRELLMQPNGQD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01224715;
90% Identity: iTF_00363369;
80% Identity: iTF_00363369;