Ccol009793.1
Basic Information
- Insect
- Columbicola columbae
- Gene Symbol
- GATA1
- Assembly
- GCA_016920875.1
- Location
- JADMLL010000001.1:9148185-9152321[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.37 1e+03 -0.7 0.1 16 24 323 330 319 331 0.83 2 2 4e-15 1.1e-11 44.0 6.8 1 35 407 440 407 441 0.98
Sequence Information
- Coding Sequence
- ATGCCTGATTCAGATGGTGAAATTTGCTTAACCAGAGGATCATCAAAAAAGTACCCCGAAAACAATTTAGAAACAATTAATAAGAATCTGTTTGAAGAAGAAGATAAAGATACAATCACATTGAATTCCATTTTAGAACCTACAAAATTAAAGAAAAAATCATTGGTTACAATTTTGGAAAATGTTAATAATGGACCTAAATCAGAGAAAACTGAAAACTGGCAACCTGATATAAAAAAGGAAGAGAGTGTTGAGGACATTAAAGAAAGATCAAATGCATCAGATGAGCTAAAAGAAATGGAGTTGTTGAAAGATGATTCAAGTTTAAAGATACTTGAAAAATGTCTGTTGAATGGAAGCAATGGTTTGTACAAGAATCCAAATGATGATCAGTCCAAAACATGTCAGAAGAAAGAAGATAAGGATGACGTAAATGATATAGGTTTAAGTAACGAAATAAATGCTTTAGAGAAGGAAGTAAAGCAGGAAATAATAAAGGATATCTATAAAAATGGAGTGTTTGATACCGAGGTATTCAACTCTAGAAGGAACACGGTCACAATCATAATAGATGACGAGAAGGCAAAAACAGAGGGTAAGGCAAACGGCATAGACGTTAAAGCAGATCGTCATAATACTGAGGAAGCAGAGGATAGCTCAGAGGATGAAGGGCAGCTGGTGATAGCTGATGAGGGTAACGAAGGCATTGACCAAGACGGTGGTGATAAGAAACACGGGAGTATGAAGATTACTCCCGAAGGAAAGTATTATGAATTCGGAAATCGTATCTACGGCGAAAGAGAAAGAGAAGCTGCAGAAGTTTTACAAGCAATAAACAGTCAGTATTTAGGTCCTCCTAAAGGCGAAGCGACTAATTTATTAAGGAAACTAATTTTTTGTAAAAACAATAGGACTGAAAATTCTGTCTTGAATAACTGTACAAATTTTCAGAAGAACGATGACATTAAAAACGGTTCGACTTTGTGTAATAAAAGAAAACGAAGTTATCCGGTGAAAACGGTCCAGGAAGTCAACGGTAAGAATTCAAATTATGACGTAATAGCCGGGGAGGATGATGAAATAGGTGAAGAAATCCACATCCCAGAATTTGGTATTCCTCCCCACGAAGGATCTCATCCTTTTCCGCGAATCGATTTCCCAAATTTAATAAAGAAAGCGAAAGAATCAAAATCCGACATAAAAAGAACTGATTTGAGTTGTACGAATTGTGGCACGTGCACGACAACTATTTGGAGGAGAAACGCATTGGGCGAAATGGTTTGCAATGCCTGCGGATTGTATTTTAAGTTGCACGGAGTGAACAGACCGATGAACATGAGAAGAGATACCATCCATACTAGGCGTAGACGAGCTAAAGGGGAGAAACCTAACAGAAGGAGATCTTCAACAAATTCTGTCACGAATGGCGATGGACCCGACGAAATGTTAGCAGCTTTGAGACGTCAAATAAATCCTCAGCTATTATTGGCAACTCTGCAGCATTCAAATCAAATACCTCAACAGGCTCTCTCATCCTCAGGTCAGTCTCTCCAAGTTCAATCTCCACACAACTCACCGCCTCACATAGTGAACTCAAAGCAACAAGACGGGAAAAATTTTATTACCATGCTGCCGGCTGGATTGACGGTGACAACGGTAAACCCATCCTCACCTGCCTCGTACAGTGCACATATTCAAACAGCAGAGACTTCGGATGCGGATGAGGATGACATGGACGTCAGCGAACTTCCACTTAACCTTGTTTCCACATCATTGGGTGATGATGAGGAGTCTTAG
- Protein Sequence
- MPDSDGEICLTRGSSKKYPENNLETINKNLFEEEDKDTITLNSILEPTKLKKKSLVTILENVNNGPKSEKTENWQPDIKKEESVEDIKERSNASDELKEMELLKDDSSLKILEKCLLNGSNGLYKNPNDDQSKTCQKKEDKDDVNDIGLSNEINALEKEVKQEIIKDIYKNGVFDTEVFNSRRNTVTIIIDDEKAKTEGKANGIDVKADRHNTEEAEDSSEDEGQLVIADEGNEGIDQDGGDKKHGSMKITPEGKYYEFGNRIYGEREREAAEVLQAINSQYLGPPKGEATNLLRKLIFCKNNRTENSVLNNCTNFQKNDDIKNGSTLCNKRKRSYPVKTVQEVNGKNSNYDVIAGEDDEIGEEIHIPEFGIPPHEGSHPFPRIDFPNLIKKAKESKSDIKRTDLSCTNCGTCTTTIWRRNALGEMVCNACGLYFKLHGVNRPMNMRRDTIHTRRRRAKGEKPNRRRSSTNSVTNGDGPDEMLAALRRQINPQLLLATLQHSNQIPQQALSSSGQSLQVQSPHNSPPHIVNSKQQDGKNFITMLPAGLTVTTVNPSSPASYSAHIQTAETSDADEDDMDVSELPLNLVSTSLGDDEES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -