Ccol016188.1
Basic Information
- Insect
- Columbicola columbae
- Gene Symbol
- Myt1
- Assembly
- GCA_016920875.1
- Location
- JADMLL010000002.1:15324520-15329877[+]
Transcription Factor Domain
- TF Family
- zf-C2HC
- Domain
- zf-C2HC domain
- PFAM
- PF01530
- TF Group
- Zinc-Coordinating Group
- Description
- This is a DNA binding zinc finger domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.9e-19 7.8e-16 57.7 5.1 1 29 74 102 74 102 0.97 2 4 2.9e-19 1.2e-15 57.1 8.3 1 29 115 143 115 143 0.98 3 4 1.6e-17 6.6e-14 51.6 5.2 1 29 160 188 160 188 0.97 4 4 9.5e-19 4e-15 55.5 5.4 1 29 220 248 220 248 0.97
Sequence Information
- Coding Sequence
- ATGGAAATACAAAAGGCCAATTTCGTGTTTGAAAACGAAAGCGAACAAATCGCTTTGCAAAAATTGTTGCAACAACTTTCGGTATCACCCGAGGATATTGGTGCCACCGAAAGCGTTAGATGTCAAAATGATTCAGAAGATTCAGATTCAAGTAATATATTTCGGAGACTATCAATCTCTCGGAACTCCCCTCGAAGTAGGGATGGAAAGGAGTTGATACAGTGTCCTACAAATGGATGTGATGGAATGGGACATATGTCGGGCAACTATGCTACCCACAGAAGTCTTTCTGGCTGTCCGAGAGCAGATAGAAGCCAAATCCAGGCACATTCTCAGGAGTTGAAGTGTCCAACACCTGGTTGCGACGGTTCAGGACATGTAACTGGAAATTATTCTTCACATCGAAGTCTCTCTGGATGTCCCAGAGCAAACAAACCTAAGAGCAAACCTCGAGATGGTCAAGACTCAGAACCACTTAGATGTCCAATACCTGGTTGTGATGGATCTGGACACGCGACGGGAAAATTTCTGTCACACAGAAGCGCTTCGGGTTGTCCCATAGCCAACAGGAACAAACTGAGAGTCTTGGAGAATGGAGGGAGTCTCGAACCACACAAGACAAGCGTTTCTCAACCGATCGTGAAATTCGAAGGAACTAATTGCCCGACACCCGGTTGCGACGGAACCGGTCACATAAACGGAACTTTTCTCACCCATAGATCACTGTCCGGATGTCCAGTGGCGGGACAAGGTCCTAAAAAGAAGTATTGCTCCGATGAAATATACACCAAGCAATGTGGTTTGGAACCCAGTCAGGGAAGCACTGTCGGACCAGGAGGAGAGGATTTGATAACTCTCGAAGCCGAGATCTCTGAGCTGCAACGTGAAAACGCCAGAGTTGAATCTCAAATGATGCGACTTCGGACGGATATAAGCGCGATGGAGGCACACCTGAGACAGGGAGATAAGGAAAGTCAAGCATTGTCCCAGAGGAATAATAACCTGAACGAGTACTACGAGAGCTTAAGGAATAACGTGATGAGTCTGCTAGAACACGTGAGAATACCCGGAACTCAAGAAAAGGCGACGCACGAGAATTTAGATAATTATTTAACCAAGTTGCAAACCCTTTGCACGGCCGACGGATACTGCGCGGACGATAGTCAGCGACCCCTATACGAAACAGTCAAATCAGCATTACAAGACTTCACATTACTCCCGACGCCTATCTGA
- Protein Sequence
- MEIQKANFVFENESEQIALQKLLQQLSVSPEDIGATESVRCQNDSEDSDSSNIFRRLSISRNSPRSRDGKELIQCPTNGCDGMGHMSGNYATHRSLSGCPRADRSQIQAHSQELKCPTPGCDGSGHVTGNYSSHRSLSGCPRANKPKSKPRDGQDSEPLRCPIPGCDGSGHATGKFLSHRSASGCPIANRNKLRVLENGGSLEPHKTSVSQPIVKFEGTNCPTPGCDGTGHINGTFLTHRSLSGCPVAGQGPKKKYCSDEIYTKQCGLEPSQGSTVGPGGEDLITLEAEISELQRENARVESQMMRLRTDISAMEAHLRQGDKESQALSQRNNNLNEYYESLRNNVMSLLEHVRIPGTQEKATHENLDNYLTKLQTLCTADGYCADDSQRPLYETVKSALQDFTLLPTPI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -