Basic Information

Insect: Columbicola columbae
Gene Symbol: znf711
Assembly: GCA_016920875.1
Location: JADMLL010000004.1:9535008-9542566[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.0047 0.36 11.3 1.1 2 23 84 105 83 105 0.95

2 15 0.0044 0.33 11.4 2.3 1 19 112 130 112 133 0.94

3 15 0.00048 0.036 14.4 0.1 1 23 244 267 244 267 0.96

4 15 0.02 1.6 9.3 0.2 2 23 273 295 272 295 0.94

5 15 0.22 17 6.1 0.4 1 19 367 385 367 388 0.76

6 15 0.018 1.4 9.4 0.1 1 23 573 595 573 595 0.97

7 15 0.0032 0.25 11.8 0.9 1 23 607 629 607 629 0.99

8 15 0.00089 0.068 13.6 2.5 1 23 635 658 635 658 0.97

9 15 0.00062 0.048 14.1 2.8 1 23 1041 1064 1041 1064 0.96

10 15 0.0031 0.24 11.8 0.5 2 23 1327 1348 1326 1348 0.97

11 15 0.1 8 7.1 6.5 1 23 1354 1377 1354 1377 0.97

12 15 0.0045 0.34 11.4 2.2 1 23 1422 1446 1422 1446 0.95

13 15 0.93 71 4.1 1.9 1 21 1568 1588 1568 1591 0.91

14 15 0.014 1.1 9.8 0.5 3 23 1639 1659 1637 1659 0.93

15 15 0.0048 0.36 11.3 5.6 1 23 1665 1687 1665 1687 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.0047	0.36	11.3	1.1	2	23	84	105	83	105	0.95
2	15	0.0044	0.33	11.4	2.3	1	19	112	130	112	133	0.94
3	15	0.00048	0.036	14.4	0.1	1	23	244	267	244	267	0.96
4	15	0.02	1.6	9.3	0.2	2	23	273	295	272	295	0.94
5	15	0.22	17	6.1	0.4	1	19	367	385	367	388	0.76
6	15	0.018	1.4	9.4	0.1	1	23	573	595	573	595	0.97
7	15	0.0032	0.25	11.8	0.9	1	23	607	629	607	629	0.99
8	15	0.00089	0.068	13.6	2.5	1	23	635	658	635	658	0.97
9	15	0.00062	0.048	14.1	2.8	1	23	1041	1064	1041	1064	0.96
10	15	0.0031	0.24	11.8	0.5	2	23	1327	1348	1326	1348	0.97
11	15	0.1	8	7.1	6.5	1	23	1354	1377	1354	1377	0.97
12	15	0.0045	0.34	11.4	2.2	1	23	1422	1446	1422	1446	0.95
13	15	0.93	71	4.1	1.9	1	21	1568	1588	1568	1591	0.91
14	15	0.014	1.1	9.8	0.5	3	23	1639	1659	1637	1659	0.93
15	15	0.0048	0.36	11.3	5.6	1	23	1665	1687	1665	1687	0.98

Sequence Information

Coding Sequence: ATGGCCAGCGGAACAATGAGAGAGCCAGTTGTGTCCTCACCTCAACCAGCCATAACCTTACAATCAGGTTCTACCATCGACGAAACTAGAAATACATCATGCTTCGAAAATAAAAGCGAGAAAGAGTCTCGTTCGGGGAAAAGTGAATCAGGTGATTGTTCGACGAGTAAAACACCGAAAGAAGAAGCGAAAAACGGTGAGAAATATTACGAAGAGAGTGCGAACGATGAAAAGGAAAAGGGATCAAGTAGCTGCGAGGTTTGCTGTGCCTCATTCACATCGCCACGTGATTTAGAGCGCCACATGTCGTACCACGACAGTGAGAAACTCGCATATTCCTGCAAACACTGTAACGATAAGTTTCCGACGAAAGACCAACTCCAACATCATGGGATGAATTGCGGGGAAAGGAAATACGAGGACTGCTCAAATCACTCGGAAGACTGTTTAACTAGCAATAATAATAATACTAATACTAATAATAATAATAATCGAATCGAAAGCAATATTAGTACAAATTTATCGAGTCCAAAGAGTAGCGAGTCGAAGTCGGAAAGCTTCGAATCCGACGATAGCTATAAGGTGATTAAGAGTTTGAGATCCGCGAGAAGACACCTGAGGAAAGAGTGCGGTGAGAGCAAGAAGAAATCGGACAGCGATTCGGAATCTTCAGTGGCCAACCGTAGGAAAATAAGAACGCTTAACAATAACGTGTATTCGGACAGTCAGTATCAGTGCCCAGTTTGCGAGAGAGACTTTAATTCTTGGAACGTTTTGCAACTTCACATAGAAAATAGTCATCCGGATTACGAAATCAAATGCGAGTGGTGCAACTTGACTTTCGACAGTCCGAGAGTATTGAATCTGCATCGATTCATGGCGCACAACGTACAGGACGATGGTAGAAAGTCGGAAACGCGGAAGAAATTGAATTTCGATTCGCCCAAATACAGAATCGATCGAAAGAATTTGAAGAACGTACCAAAGGTGATCGGTTTCCAGGACATCAACTTTATCGATTTTTCAAGCGAGAAATTCCCTCTCATCGCGAAAAATATCTGCGAGAAGAGTCTACATCTGTCAAAGGATGAGTTTTCGTTCGATTGTCCTCATTGCGGACGAGGATTTCCCTGTGACACAGCCCTTGAGATCCACGTGGAAACGTGCGAGAACAACGAGAAACGAAATTCTCCGAAGATAGAGAAGAAGAATAAAAGGAAATCGACGCCGAAGTTTCGTCCGCAGCACTCGGCGGGCTCCGATTCCGACGATTATTTAGAAAGTATAGAGATCAACGTCTCCAGCGATCAGCAACGAAAAGCTTTCTTCAACAGCCTAGATCTTCAGAACACGGAGAAGTCCTCGCACTCGGACGAGGAATCCGCGTCCGAGAGGAAAGGTGACAAATCCGATTTGGCTGACATACAGAGCATACTCTCGGTTACCAATATCCCTGGGATAAACATGAAGGATTTTGAGAATTCTCAGGAGAGGAAAGGGAAACAGCAAAACGAGGACAAAACCTCGATCAATTTGAACATTCACATAAACAACAGTCAGTGCAGTCCCGGAAGTTTTTCAAGTCTCAGCCTGAATTCGCCCAACTTCAATGTTTTGAATTTGATATCTCCAAATTATTCGGGGAACGAAACAACCGAAGAAGAGGCTCAAGACTGTTTCGCGGCGGAATGTCGAAGAATGAAATTGAGAGGCGAGTTTCCCTGCAAATTGTGCACCGCCATATTTCCGAACCTGAGAGCTCTCAAAGGCCATAACAGAGTTCACATATCCGTCGCAAACGGAACTCCAAATTCTCCGTATAGATGTAACATATGCACGTACAATTCCCTGGACAAGGCCACACTCGTCCGACATATGCGTTCGCATAATGGTGACCGACCTTACGAATGCGCCATGTGTAATTACGCGTTCACGACGAAAGCCAACTGCGAACGTCATCTAAGGAACCGTCATTCGAAAATAACAAGAGACGAAGTCAAGAGCTCTATCATATATCACCCCTCGGAGGACCCAATAAACGATTCGGATTACCAGAAGACAAACGAAATGAATAAGAGAAATTTGGAAAAGTCAAAGGAAAAGCAGGAGTTCACGCTGCCGATAAATTTGAAAATCAATTTGACGAATCTGAAGGAAAATTCTAAGGGAGAGGATTTATTTCAAGCAGAACACCAAGAGCTGATAAAGAACATCAAAAACGAAGAGGAGAATAAGAAAACGGAAACGGGAACCATGACAGAGGATTTAGAAGCGGAGAAGTATAACGAGTGGCAGTATGAAGAAAATGAAGAAGCTTTAGATCTGAGAATGTACAAAAATAAAAATTACGAGTCGGATTCGTCGGACGTTCCTCAAGATCTGTCGAAGAAGGAGGAGGTCAAAGAATTCAACAACAACGTGGAGGAAAAGTCGCCGAAGGTAAATTCGGAAAATTATTCGAATCAATATTACGATAGCAGCAAACCCAATTTGGAGATCAATAATTTGGTGAAAATGTATTCGAGCATGTATCCAAGTCTTAACGTGAGTCAGATTCATCAGATCATTCTGACTCAGTTGAATTTTCCGGGGATCCTACAGAAATTGCATAATTTTCCATTTTCTCCGTTTCTCATGTCGTCTCCACTGTTCACTAACTCGAATAATTATCTACAGAAAGGCGTTCAGAAGGACGTGATCGGTCTTCAAATGTCCGGTGGGAATATTTTGGATGAGAAAAGTCACGGTTTGACCATGTCAGAAAAATTACAGTTTTTCCAGCAGCAAGCTCTCGCCGAGATAATGTTCAAACGAGAAAAGGATCGAATCGCAAGCGAGTACTTCAGCAAGAACTCGCATTTAGGCGAAGATGTCGATAAGCAAAAGAGATTAAACGATTTCATCAAGCAGAATGATTATTTTTCGGAGCCGGACAAGAAGTCGTTCGGAGAGATCTTACTGAACCGACGGGAAGAGAAGAAAGAAGTGAAAATGAGCAGTGGTGGCGGGAGTAGTGCGGAAAAATCAACTGACAACAGGAACTCCTCGGTGAAAATGGTCATTAAAAATGGGGTTTTGATTCCGAAACAGAAACAGAGGAGATACAGGACGGAAAGACCTTTTTCCTGTGAGCACTGCAGCGCTCGGTTCACTTTGAGATCGAATATGGAAAGACACATCAAGCAACAGCACCCACAATACTGGACGCAGAAATCGAGATCGAATGTTGGAAACCTTAGGAAGTCAGATCCGAACCCGACGACCAAGGTGAACACTTACGAACGAGATTTCGAGGTGACTTCTAATAATGACTACCTGAAACATTACGAAATCAGAGAACCTCTTTCACTTATGTCTAGAGGGAGTCTGAATACGTCTGGAGGCGAAGTCAAGTGGAAGGGATCGGCTAGAGTCAGACAGGAATCTGAGAAAAGTAAAGAGGACACGGTCAGTTTGACTAGAAAGGATGATCTGGCAGAAGACTTGGTTAAGGTGAAGGAGGAAGTAGTGGTGAAAACGGAAGTAGAGGAAGAAGAAGAAACTAAAGATGGATTGGTGATCGATGAGGAAAAAACGGAAGAAAGCAAGAAGAATAAAGGAAGTGAAAACAACTCGCGGTATGTTAGATTGAAGCAGTCGGTGGATGATGTCGAAGTGGAGAAAGCAAACCTAAAGGAAGAAGAACTAAGGGAAATGGGAAAGGATCAGCCTCAGGATCTAGCCAGCGTGTCAAAAATGTTGGACAATGCAGTGACTCAAACCCAAGCTTTCCAGAAGTACTTTCAAGAAAGTGCGAAGAAAGAAGATGAAATGAAGAAGGAAGGAGATGAGGGGAAGAGAGAGGAGGGAGATCGAAGCGAAGAAGAAGAAGGTTTGGTTGCTGGTAGCACAAGCAGCGACGAGAACAGGTCGGAGTCTGAACAGTCGTCGAAAAGTGGAAAGAAGAAAAGCGCTTACTCGCTGGCACCCAACCGAGTCTCCTGTCCGTACTGCTTTCGAAAGTTTCCGTGGACGAGTTCTCTAAGGAGACACGTCCTCACTCACACAGGACAGAAACCTTTCAAGTGCACTCATTGTCCTCTTCTGTTCACGACGAAAAGCAACTGTGATCGCCATTTGTTGAGGAAACACGGACGAGAAGCTCTAATCGCCAGTTCTGGTCAGACGGAGAATCACGAAAGTGCGGGGAGCGTGAGCGTGGTTAGCAGTCCGACTCAGTCTCAGAGCAACAATTACACAATGAGAAACGTCCCCGAACGACCTTACAAATGCAATCAATGTCCGTCGTCGACTTTTTCAACTCTCAGCAATTTGAATAAACACTTATTCAGCAAACACAACGCGACACATCAGAATGAATCAGCGGATCAGGAGCCGGTCACGACGACGGAGCCCAAGATGAAAACGGTGAATTCGCAAGGTCCTCCCAACGTTACCATATCGCCGACGTTTCCCGTGACTCGGGAGGAGGGAAAAGCATGCAAGTCATCATACCGGCGGTCAACTGTAACGGAGTCGATAAGGAGGGAGGCGAGAAGCGAGAGCTCGAGATCGTCGAGGAAGAGAAGTTCCAGCGATGAAACGGAAGCCACGGAGAAGAAGAGAACATCTCCGGATCTGAGCAAGATAACGAATCACGAGTCACATGATACAGACATTCACCGCTCCGAACTGTTACCCATCCCCCCGAGCGAGTTGCCCTTCAAGTGTCACCTCTGCGATTCTTCTTTCGGAGAACGAGGAGAAGCTTTGGAACACATCAGATGCCAACATCCCAACGAATTTCAGTTGCTCGTCTCGAAAGGAGCTCTAGAAACGAACACGGATGAGGAGAAGCATCAGCACGATGAGAACGACGAGATTTTGGATTCGACACGAGGTCGTTTCCCGGACTATGCTAATCGGAAGGTTATGTGTGCTTTTTGTATGAGGCGATTCTGGTCTGCCGAAGATTTGAGGAGACATATGAGGACTCATACGGGAGAGCGCCCGTTTTCCTGTGACGTTTGCCAGAGAAGATTCACTTTAAAACATTCTATGTTGCGACATCGGAAGAAACATAATACGCAAGATGAAGTTTTGGTTGGCAGCGACGAAGAACACCACAATTCTTATCAAGTCAACCACAACAACAACATTTCAGTGGCCATGACAGCAGTTCAAAAGCCGACCGAACTGGAGGAAAACCTTCACAGAACGATCCTCCATCAAACACTGACTCGTTGCGACGATACGAAAGATGATCTCAGGAGCGAAGTGAGGATTTCAGAGAGGCTCGGAGATGCCAACGGAAGTAAATAA
Protein Sequence: MASGTMREPVVSSPQPAITLQSGSTIDETRNTSCFENKSEKESRSGKSESGDCSTSKTPKEEAKNGEKYYEESANDEKEKGSSSCEVCCASFTSPRDLERHMSYHDSEKLAYSCKHCNDKFPTKDQLQHHGMNCGERKYEDCSNHSEDCLTSNNNNTNTNNNNNRIESNISTNLSSPKSSESKSESFESDDSYKVIKSLRSARRHLRKECGESKKKSDSDSESSVANRRKIRTLNNNVYSDSQYQCPVCERDFNSWNVLQLHIENSHPDYEIKCEWCNLTFDSPRVLNLHRFMAHNVQDDGRKSETRKKLNFDSPKYRIDRKNLKNVPKVIGFQDINFIDFSSEKFPLIAKNICEKSLHLSKDEFSFDCPHCGRGFPCDTALEIHVETCENNEKRNSPKIEKKNKRKSTPKFRPQHSAGSDSDDYLESIEINVSSDQQRKAFFNSLDLQNTEKSSHSDEESASERKGDKSDLADIQSILSVTNIPGINMKDFENSQERKGKQQNEDKTSINLNIHINNSQCSPGSFSSLSLNSPNFNVLNLISPNYSGNETTEEEAQDCFAAECRRMKLRGEFPCKLCTAIFPNLRALKGHNRVHISVANGTPNSPYRCNICTYNSLDKATLVRHMRSHNGDRPYECAMCNYAFTTKANCERHLRNRHSKITRDEVKSSIIYHPSEDPINDSDYQKTNEMNKRNLEKSKEKQEFTLPINLKINLTNLKENSKGEDLFQAEHQELIKNIKNEEENKKTETGTMTEDLEAEKYNEWQYEENEEALDLRMYKNKNYESDSSDVPQDLSKKEEVKEFNNNVEEKSPKVNSENYSNQYYDSSKPNLEINNLVKMYSSMYPSLNVSQIHQIILTQLNFPGILQKLHNFPFSPFLMSSPLFTNSNNYLQKGVQKDVIGLQMSGGNILDEKSHGLTMSEKLQFFQQQALAEIMFKREKDRIASEYFSKNSHLGEDVDKQKRLNDFIKQNDYFSEPDKKSFGEILLNRREEKKEVKMSSGGGSSAEKSTDNRNSSVKMVIKNGVLIPKQKQRRYRTERPFSCEHCSARFTLRSNMERHIKQQHPQYWTQKSRSNVGNLRKSDPNPTTKVNTYERDFEVTSNNDYLKHYEIREPLSLMSRGSLNTSGGEVKWKGSARVRQESEKSKEDTVSLTRKDDLAEDLVKVKEEVVVKTEVEEEEETKDGLVIDEEKTEESKKNKGSENNSRYVRLKQSVDDVEVEKANLKEEELREMGKDQPQDLASVSKMLDNAVTQTQAFQKYFQESAKKEDEMKKEGDEGKREEGDRSEEEEGLVAGSTSSDENRSESEQSSKSGKKKSAYSLAPNRVSCPYCFRKFPWTSSLRRHVLTHTGQKPFKCTHCPLLFTTKSNCDRHLLRKHGREALIASSGQTENHESAGSVSVVSSPTQSQSNNYTMRNVPERPYKCNQCPSSTFSTLSNLNKHLFSKHNATHQNESADQEPVTTTEPKMKTVNSQGPPNVTISPTFPVTREEGKACKSSYRRSTVTESIRREARSESSRSSRKRSSSDETEATEKKRTSPDLSKITNHESHDTDIHRSELLPIPPSELPFKCHLCDSSFGERGEALEHIRCQHPNEFQLLVSKGALETNTDEEKHQHDENDEILDSTRGRFPDYANRKVMCAFCMRRFWSAEDLRRHMRTHTGERPFSCDVCQRRFTLKHSMLRHRKKHNTQDEVLVGSDEEHHNSYQVNHNNNISVAMTAVQKPTELEENLHRTILHQTLTRCDDTKDDLRSEVRISERLGDANGSK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -