Ccol006570.1
Basic Information
- Insect
- Columbicola columbae
- Gene Symbol
- CSRNP3
- Assembly
- GCA_016920875.1
- Location
- JADMLL010000005.1:7488762-7491843[-]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.39 6.6e+03 -3.3 1.7 93 109 96 113 73 162 0.53 2 3 0.11 1.8e+03 -1.5 1.5 63 108 209 253 179 277 0.53 3 3 4.2e-101 7e-97 323.5 8.0 1 218 455 660 455 660 0.91
Sequence Information
- Coding Sequence
- ATGAATGAGGTCGAGGGCATGGACTTTACAGAGCGCTCCCGCCTACATTCGCCTCCGTCCGCGTTTTTGGTTTCCGAAGAATTGAATTCGAACGTTTCCGAAAATGCTTCCGACACGTTGAAAAGCCCCTGTGCCATAGTCAATGAGGATTGTAATAAAGGTGCTTTAGTATTGGTTAAAAACGAGGACTGTGAAAGTTGTGTCATAGATAGTACGTCAAAGTCTGATCCGGTAGATAAGGTCGAAGACGTTGGGAATTGTGACGAATTTAATAATAAAGAAACTGCAGCCGAAGATACGTACGAGGAGGATTCCGATAGACAAATTGAAACTGATAATAGAAATTCGGATTCTGTGAAAAAGTTTCGAGTGTCTCCGACTTTGGTCGATGAACAATTAGAGAATAATGATTCGGAGCTTCAGCTGTTATCGAACTCCAACAATTCTTCCACGTGTTCCACCGAGCCATCGTCCAAAAACAGCGATTTGGATAAAAATGGAAAAATCGCACCGACACTCTATTTCGAGTTTAGCGACGAATCCGGTAAAAACGATTCGCAGATCTCTAAGATGCAAGTATCAGTCGATTCGGTACCCGTTGACAGTACGACGGAATCGGGGAAGTCTGAAGAGAAAGAGGAGGAGAAAGGAGAAGGTTGTCAGAATGTTCAAAATGACGACGGCCAATCAGAAAACTACAAGCTGGTCGAGACGACTGCGGAAATCAATGAGAGCGAAGTCGAAAGAAGCGACGGCAGCGATTCAGGTCTAGGCTCGGAGTTATGCGACGAGAAAGTAGAGGCTTCCGTCAATCGGGAAGGTGTACCCGATTCTTATTCGAAAGTCTCCGAGTTCGATGCTGGAATCGGATGCGAGTCCGAAGTCGTTCAAGACGAGCAAGGTGGCACGGAGATCGACACATCCGAAAGATGTGACGGAAGCGATTCCGGATTGGGTTCGGAGCTGGCAGATGAACGGGGTGATTCGGATCCTTGTCAGATAGATTCTTCGACGGTTAACAAGTCTGCATCTCAGTCGCAAGTGGATGTTGACTCGTGTTTGGAAGTCGATGAAGATAAATCTGAGTTTCAGATAGAAGCCCCCGCCCTTGATGATTTGAAAACGCCAACTTTCGAAGAGATACGACCTCCTTGTTTAGCTTTCGACGAGATAAAAGAAAATTCCGAACCCCTTCGAACTCCGCAGCCGAATTTAGACTTTCCAATGTGTTCGCTGTATGAAAAGCCGTCAGAACTTAAAGCAGAGCAAAGTGATGTGTTAAAGACACTACCGCAAATTCAATTACCAATGAAAAGTAGTTTGAAAAGGAAAAGCTCGGACGCGGATCTGGATGTGATACCCAAAAAGAAGCGTTCGATTTCCTTTAACACGGTCTCCGTATATTACTTTCCTCGTGCACAGGGATTTACCTGCGTTCCATCTCAAGGAGGTTCCACGCTTGGTATGTCACCCATACACTCTCATGTACAACAATTCACTCTTACGGAACACGCTCTAGAGCAGAGGCGGCTGCATCGATTGATGCTCCAAAGACTAAGAAATGAAAGGTTGCAGCCACCTTCTGATACTGATGATACCGAAAGTGATGAAGAGCCTACCGATGATGAAGAAGATGAAATGAACCTAGATAGCTATTATTTCTTGCAGCCCGTGCCTACGAGGCAGAGAAGAGCGTTATTGAGGGCAGCTGGTGTTCGAAAAATTGACTCGATGGAGAAAGACGAATGTAGAGATATAAGAACTTCCCGAGAATATTGTGGATGCTGCTGCAAAGATTATTGTGATCCAGACACGTGCTCTTGCTCACAGGGAGGAATCAAATGCCAAGTGGATAGGCTTCATTTCCCTTGCGGCTGTACGAGGGATGGCTGTGGAAATCCGAGCGGTCGAATCGAGTTCAATCCTGTCCGAGTTCGCACTCACTTCATTCACACCCTGATGAGGTTGGAGTTGGAGAAGAAGCACAAGTTGGAGGAAGAGGAGGAGAAAAGTGAACCTTATAGCAAACTGGATCATCAGTGGAATGTGAATCCGACACCACAAGAGGGAACGAGTTTCACCGAAGGACAGCCCATTGATCTTTATGCTTGCCGTGATGAACAGTACAGTGTAAAGTCCTGCAGCAGTATTGATTTGGAAGCTCCTTCTACCTCGAGTTTGGTTTGCTCTCCAACGAAGCCAAATCACGACATGAGTAACTTCCAATATCACTCCACGCCGTCAAATTACCCTAATTCAATTGATATGTACCAAGAGTCTTCGACGAAGTATCCAAATCATTTCTCGACGTTTTCGTTTCCGCCGACTCAGTCCATCGCAAGTTTCTCTCCTTACGGTTCTGTGTATCCTCAAGATATATCCAAAGAGCTAGGCAGTAATCCGTACAAGGGATTGTGTGACAATTTCAAGCAGTCTAATTCAGAAGGATTTCCAGCGTATCCCACCCTCAGGGAAGGTTTTTTCCAGAACAAGGAAAACGAGGTCAAACCCAACGAATCTCTTTCATCTGCGAGCACGTATGCAAGTCTTCACACCGTCTGTTCCAGTAGTAGTCGCCTCGAACCCTTTTCCGAATTGCTCCAAGGCCGCTATCCGGTTCTTCCTCTCACCGTAACTTCGGATTCTTCTTTCGAGGATCACGCTTCTCAGATTTGCTCCTCTTCTGCGTCTTTAGTGACGGAACACTCAGAACCTCAATTTTCCGAAGTCGACATCAATCACGAGCCTTGCGTTGAAATAAACGAAGAGCCAGCGAATGGAAAAACGACTCAAGGCGAGCCAGAAGCAATAAGCGATGATTCTTCACTGCCAAACGAACGAGTCGTGGAAGAAGAAAGCGACACAGAACCCGAGAGTGAAGGCAGCAAAGTCAATGCAGAATCTCAAATTCTCGAAACTCCCGTCTTGGAAACGAACGGAGAATGCGATGAAAATCTAGGGGAAGTTATAAAGAAATCAATAGTAGAAACGGTCTCTTCATGA
- Protein Sequence
- MNEVEGMDFTERSRLHSPPSAFLVSEELNSNVSENASDTLKSPCAIVNEDCNKGALVLVKNEDCESCVIDSTSKSDPVDKVEDVGNCDEFNNKETAAEDTYEEDSDRQIETDNRNSDSVKKFRVSPTLVDEQLENNDSELQLLSNSNNSSTCSTEPSSKNSDLDKNGKIAPTLYFEFSDESGKNDSQISKMQVSVDSVPVDSTTESGKSEEKEEEKGEGCQNVQNDDGQSENYKLVETTAEINESEVERSDGSDSGLGSELCDEKVEASVNREGVPDSYSKVSEFDAGIGCESEVVQDEQGGTEIDTSERCDGSDSGLGSELADERGDSDPCQIDSSTVNKSASQSQVDVDSCLEVDEDKSEFQIEAPALDDLKTPTFEEIRPPCLAFDEIKENSEPLRTPQPNLDFPMCSLYEKPSELKAEQSDVLKTLPQIQLPMKSSLKRKSSDADLDVIPKKKRSISFNTVSVYYFPRAQGFTCVPSQGGSTLGMSPIHSHVQQFTLTEHALEQRRLHRLMLQRLRNERLQPPSDTDDTESDEEPTDDEEDEMNLDSYYFLQPVPTRQRRALLRAAGVRKIDSMEKDECRDIRTSREYCGCCCKDYCDPDTCSCSQGGIKCQVDRLHFPCGCTRDGCGNPSGRIEFNPVRVRTHFIHTLMRLELEKKHKLEEEEEKSEPYSKLDHQWNVNPTPQEGTSFTEGQPIDLYACRDEQYSVKSCSSIDLEAPSTSSLVCSPTKPNHDMSNFQYHSTPSNYPNSIDMYQESSTKYPNHFSTFSFPPTQSIASFSPYGSVYPQDISKELGSNPYKGLCDNFKQSNSEGFPAYPTLREGFFQNKENEVKPNESLSSASTYASLHTVCSSSSRLEPFSELLQGRYPVLPLTVTSDSSFEDHASQICSSSASLVTEHSEPQFSEVDINHEPCVEINEEPANGKTTQGEPEAISDDSSLPNERVVEEESDTEPESEGSKVNAESQILETPVLETNGECDENLGEVIKKSIVETVSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -