Ccol015599.1
Basic Information
- Insect
- Columbicola columbae
- Gene Symbol
- crm
- Assembly
- GCA_016920875.1
- Location
- JADMLL010000002.1:18375333-18384194[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.3 1.4e+03 -0.6 0.1 18 29 76 87 71 87 0.71 2 3 1.1e-06 0.0011 18.9 0.0 3 44 88 141 86 142 0.92 3 3 0.87 9.1e+02 -0.0 0.1 22 30 142 150 140 153 0.88
Sequence Information
- Coding Sequence
- ATGCTAGGGTCAAAAATGAATGTTGATGTGGAAAAAAGTGAGGAGCCTCTGGGTTCTGTTACTCAGATGGAATGCAGTTCTCCTGGAGCGACCGGAGTTCCTGTTAGGTCCAGCGCTAGAGTTTCTAAAAAATTAAGACTTGATTCTATGTCAAAACCAAATTCTAATGTTCCTGCTTCTGATAAAAAAGATGTTGGTAAAGAAGAAAATGATTTAGTATCAAAAAAATGTGAATCAAAATGGAAAAAAATTAAATCTCACAATTGGTCCGCCCAGGGAAAAGATATTTTTTTTGAAGCTCTTAATGAATATGGCAAAGACTTTGAAGCCATTCAAAGGTACTTTGCAGTCAAAACGAAGAAGAAAAATGGATCAGAGTCAGTGATGAAAACCAAAGAACAAATAAGGCATTTTTATTACAGGACATGGGCCAAAATATCAAAGCATTTAAAATTTCCTCCAGATATTAAAAAACAAACACAGGAACTATACGGCTTGATTAACTACGGTGAATTCAGGAAGAAAATGGGTTGCGTCACTGAGAAAACTAGTTTAAAACTGAACGAACTCGTCATCCGGGGTTTCACACACTTAAGGGTTAAAGGGAAAAACGTTCACATACGAACTCCCAGGTGCCGAACGCTGAGAAGATTAAATCAGTTGGAAGAATGTCAAGACGAAGTCAAGTTGCCGTCGAGGATTCATGTAGAATTAGTTCCAAGGTGTAATGACTCATGGGCAAGGGTTCAGTCTACAGCCCAAAATCCAAGGGTGCAAATCACCGTTCCTCTTCAGTATAGACTAACAAATTTAATCCAATACTTTCAAAGACGATGGCTTCCACGCCATTCCAAATATAAAAACAAAATGCTAAAAACGTATCAAATAAACGGTAAGGAAGAGGAAGGGGATCTATTAGTCGTAGGACCAAAGCCAAATGCTCAAGTTCATATATCGGAAGTGAATCTGAGTCAGTATTTAACGAGCAATCGTATATGTTTAAGTTCGCACGAGGAAAGGCTGGGAAAGAAAGGATCTTGCGAGGAAATACTAAAAACTCTTAAAGCTGAATCCAGAGGAAAGGGTAAAAACAGCAAAATTGAGGAGTGTAAAAAGCCCATGGATAAGGCAAGTCCAGATCCGAAGAGGACGGAGGGAGAGGAGACAAGAGCGGAAGAGTCCAAGGGAATTTTCAAACTGTTGTCTGATGAGAAAGATGTCAAAATGAATGATTCGGATTTCCTATCGCCGGATTTGTCCAATGACGAAAAACCAAATTTTGTAAATACTGTCTGTGCCAACGATATGGTCGAAGATAACGTCGAGGCGAATCATAGCGAAGTTTTTGAGGATTTCCGGCCAAATGATGCCAGTGGTAAAAACGACAAGATTCCGGATTTCATCGAGGGATTAATGAAGTTACAGAACAAAGACGAAGCTATTGCAAAAATTCGAAACGGATGGAGCTTGGAAAATAGTCACTCTCTCGCTTTGGGAGATTTGTACCTTATGATCGGAAGCGAGTACAAACTGCAACTCGACTACTGGTGGAAAAGCAGCAAACAGCCTAATGAAATAACCACCGATTGTAATTTGGATAAACTGAGCTCCATGCTCACCAAATTGATTCGACTCACAAAGCTTACGAAAGCGAAAGCGAAATCCTCGTGCTTATGTGGACATCAGTGCAGCGACGAAATTAAAGCATCAGCAAGAGGAAGACGACCGATTAGCGATTCATTAGCAGAGAAGTCTGGTGGTGAAAATGGGAGGGACAATTCGACAACAAACAATCATCCTAATAATCTAAATTCTGACATATTCAGAAAACCAAACGTACACACTGCTCCTAAAAGCAGATTGGATCGTGAAGCTTTCAAAGCTCAGCTGGATAAATTAACGCCGAGGTATTGCAATCGAAGAGGACGTGGCATAGCCGCAAAAAATGTTGTCGTCCAAAGAACGTTGCCACTTTTGCCAAAAGCCAATAATGGACATGCGATCGTAACTTTGAAGTTAATACCTCAGACGAGCCAGTTCTCCGGGGAATTCATGCCTGTTTCGTTGGTGACGTCCGCACCAAATTCTCCTAGAGACAACAAAGAAATTTCGAGGAGGAGGGTTGAACAACCTATCGCGCCTAAACCTCCTCCACCTTCTGAAACGGCCACAACTCCCGTCGAACATTCCTTATCGCCGACTCCGAGCGTGTCTGCTTTATTAGAAGATCACGACCCGATGATGGCCATCGGAAGCACTGACAATAATTTCACAGGGTTATCAGGAGGTTTCGAATGTTCAGGCATTCCTCCTCCCAGCCCAAGTCCGACTGTCATTTTGAGGGAAGAAGACTGGTTAAATTCCGAAGTTGCTGATTATTCTTTAAGCAGTATTTTAGGTCATTTAGAGACACCAATTAAAACTTCGAATTGCCAAAGTTACGAGAACACGTCGGAGGTGGAGAATCAGCTTCAGTGTTTAATGACAGAAACGAGCATCGACTACATGGCGAAATTTGCAGATTTGGCTGCGAAACTATCATCAGACAACAGTCCCTAA
- Protein Sequence
- MLGSKMNVDVEKSEEPLGSVTQMECSSPGATGVPVRSSARVSKKLRLDSMSKPNSNVPASDKKDVGKEENDLVSKKCESKWKKIKSHNWSAQGKDIFFEALNEYGKDFEAIQRYFAVKTKKKNGSESVMKTKEQIRHFYYRTWAKISKHLKFPPDIKKQTQELYGLINYGEFRKKMGCVTEKTSLKLNELVIRGFTHLRVKGKNVHIRTPRCRTLRRLNQLEECQDEVKLPSRIHVELVPRCNDSWARVQSTAQNPRVQITVPLQYRLTNLIQYFQRRWLPRHSKYKNKMLKTYQINGKEEEGDLLVVGPKPNAQVHISEVNLSQYLTSNRICLSSHEERLGKKGSCEEILKTLKAESRGKGKNSKIEECKKPMDKASPDPKRTEGEETRAEESKGIFKLLSDEKDVKMNDSDFLSPDLSNDEKPNFVNTVCANDMVEDNVEANHSEVFEDFRPNDASGKNDKIPDFIEGLMKLQNKDEAIAKIRNGWSLENSHSLALGDLYLMIGSEYKLQLDYWWKSSKQPNEITTDCNLDKLSSMLTKLIRLTKLTKAKAKSSCLCGHQCSDEIKASARGRRPISDSLAEKSGGENGRDNSTTNNHPNNLNSDIFRKPNVHTAPKSRLDREAFKAQLDKLTPRYCNRRGRGIAAKNVVVQRTLPLLPKANNGHAIVTLKLIPQTSQFSGEFMPVSLVTSAPNSPRDNKEISRRRVEQPIAPKPPPPSETATTPVEHSLSPTPSVSALLEDHDPMMAIGSTDNNFTGLSGGFECSGIPPPSPSPTVILREEDWLNSEVADYSLSSILGHLETPIKTSNCQSYENTSEVENQLQCLMTETSIDYMAKFADLAAKLSSDNSP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -