Ccol008242.1
Basic Information
- Insect
- Columbicola columbae
- Gene Symbol
- -
- Assembly
- GCA_016920875.1
- Location
- JADMLL010000012.1:10587636-10588605[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.2e-07 0.00012 22.0 0.2 3 44 31 73 29 74 0.94
Sequence Information
- Coding Sequence
- ATGAGTAAAGCTGCCAAAAGACCACGGAGAGGGGTTACTGAGAAATCACAGGTAAAGAGCTCAGCTGGTTCGTCTACTGGGAGTTCTAGAAGATGGAAGGAACATGAAATAGAAGAATTACTTGACTGTATTAAGAAACATGGACATAAGAATCTAAATAAAGCATATGAACGCATTCCCAGTAGGAGTGTTGAATCCATTAAAGTATTTTTGAGAACCGCTTATGACAGAGGCTGTAAACGCAGTGAAGAACATCCCAATATTGATCGTTGGATTGATCTATGCAATACTAAATTGAATAATGAATCTGCTTGGAAGGACTCATTACAGATAGCAAGAGTCATTAAATATTTGTCTGTGGATGGTTTGTTAGAACATCATCCTCTTCCTGAACGTTGTCAGGGAGTAAACTTCTTAGAAGCTTATAGACTCCTCTATCAAGCATTGATGGGGTATCCAATTCAACCTGTCAATGAAGCGACTTCTAATTTCGTTCAAGATTGCATGAATGAAGTGAGAAACGAATTAAAAATTGATTCTGTTGCTATTGAAAAAATGACTGAATTTTTAAAAGAAAAGCTTGTAAATAATAAACCTGTAGAAAAGGAATCATTGTATACTTCACTTGAAAAAGGAGTTAATAAACCTATAAAAATGTATCAAAGAAAAAAGCAAAAACCATCATCAGGAACACAGGAAAATTCTCCTACACTTAGTATTGTTGTTGAAGCCAATGGCAATAAAGGCTTTGAATCTGATTACACCCAAAATTTTTCACTCACAGTTCAGGAGGGTTCTAAAGGAACTCCACCTACAGTTATCAATGTGCCTGTTCCTGTTCCAAGCAAGTCGTATACCCAAAATGTAAGTCTGATAGTTTTAAACTGCTAG
- Protein Sequence
- MSKAAKRPRRGVTEKSQVKSSAGSSTGSSRRWKEHEIEELLDCIKKHGHKNLNKAYERIPSRSVESIKVFLRTAYDRGCKRSEEHPNIDRWIDLCNTKLNNESAWKDSLQIARVIKYLSVDGLLEHHPLPERCQGVNFLEAYRLLYQALMGYPIQPVNEATSNFVQDCMNEVRNELKIDSVAIEKMTEFLKEKLVNNKPVEKESLYTSLEKGVNKPIKMYQRKKQKPSSGTQENSPTLSIVVEANGNKGFESDYTQNFSLTVQEGSKGTPPTVINVPVPVPSKSYTQNVSLIVLNC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -