Basic Information

Insect: Columbicola columbae
Gene Symbol: SMARCC2
Assembly: GCA_016920875.1
Location: JADMLL010000008.1:6413982-6419802[+]

Transcription Factor Domain

TF Family: MYB
Domain: Myb_DNA-binding domain
PFAM: PF00249
TF Group: Helix-turn-helix
Description: This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 6.2e-15 6.5e-12 45.3 0.1 3 44 607 648 605 650 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	6.2e-15	6.5e-12	45.3	0.1	3	44	607	648	605	650	0.95

Sequence Information

Coding Sequence: ATGATGACGACTACGGGTCCTAAGAAAGACGGGGGACCCAATGTCAAATTTTTTGAATCTCCCGAAACTTTATCATTACTTGATGGCGTAAAATCTTGGCTTCAAAAAAACTGCAAAAAGTATGTACAAGCTGATCCTCCAACAGCAAAAAGCCTGTCTGCACTAGTTATACAACTTGTTCAATTTCAAGAAGATAATTTTGGTAAAAATGTCAGTAAACCACCACTGACCAGATTACCTATGAAATGCTTTTTAGACATGAAACCAGGAGGAGCATTATGTCATATTTTAGCGACAGTTTTTCGTTTTAAGTCTGAGCAAGGGTGGAGAAGATTTGATTTCCAGTCACCCTCGAGAATGGACAGGAATGTTGAAATGTTCATGCAAGTGGAAAAAGCTTTGATACAAGCCAAATGCTTAACAATGCCAAATGTATTTATAAGATCAGATGTAGAGAAGGGATTGCAGTCAAAAATTAAAGATATTATAAAGCGTCATCAGGGTACTATCACAGATAATGAAGATGAAGCGACTCACATAATATATCCGCCTTGCGATCCATTAGATGAAGAATATGCAAGACCTTCAATGAAACGTGACAAATGCGTTTTAATTCATTGGTATTACTTTCCCGATTCCCATGATAGTTGGGCTCAGATTGATGTTCCAGTGGATCCTCCGGATTCTCCTCCAGCACATATCGGACCTTGGAGGGTTGGCGCCACATGGGCTCTCGAATTGGAGCAGTATAATGAATGGATGACCGAAGAAGACTATGAAGTTGATGAAAATGGCAAGAAAAAAGTTCACAAACTGCGACTATCGGTGGATGAATTAATGGCTTCGTGCGATCCAAGTTCCAAGAAAAAGCCTAACAAAAGAAAAAAATCACCGTCCCCGCCACCAAAATCAGTCAGCAAACGCAAAAGTGCAAGAGGACCGCCGACGCCTGCTGTCGCCAACAAAAAACATAAAGGTGAAGAAGAAAGTGAGGACTTAACCAAAGACATGGATGATCCTCCGTCTGATACTAATATTCAAGAAGTTAATTGTACAAAACCCGGAACGTCTTCTAAGAAGGATAATGACTTACAACCTATAAAAGGCGGAACGATAACAGATATCGAAGAAGCAGACATGGACAAGGTAGATGAAAACAGTCAAAATACAAAGAACTCGGATTCAAACACGCAAGATAAAGAAAAAGACAGAGACAAAGATAAGGACAAAGATGCTAAGCAAGAGGACAACGTAACGGAGCAAACTCACCACATCATCATTCCTTCTTATTCAGCCTGGTTTGATTATAATTCCATTCACATAATTGAGAAGAGAGCTCTCCCGGAGTTTTTTAACGCAAAGAATAAAAGCAAAACCCCCGAAATCTACATTTCCTACAGGAATTTCATGATTGATACTTACAGATTAAATCCGACGGAGTATTTGACAAGTACGGCTTGTAGGAGAAATTTAGCAGGAGATGTTTGTGCCATAATGCGAGTACACGCATTTCTCGAGCAATGGGGTCTCATTAATTATCAGGTGGATTCAGATAGTAGACCAACTCCTATTGGACCTCCTCCAACATCTCACTTTCACGTTTTGACGGATACTCCCTCTGGATTGCAACCGGTGAATCCTGTAAAAACTCCGCAGCCATCTGCAGCTAAGATGCTACTCGATATGGACAAGAAAGACAAAGAAAAGGAAATTAAAAAAGAGCCCATGGATATCGGTTCCAATTTCGGCCTTAAATTAGATCAGTACGCTAAAAAACCGGCGGCGTTGAAAAATAAAGCAGCTGCAGGTATCACTCGGGATTGGACTGATCAAGAGACACTTTTGTTGCTGGAAGCCTTAGAATTGTACAAAGATGACTGGAATAAAGTATGCGAGCACGTAGGAACAAGAACTCAAGACGAGTGTATTTTACATTTCTTAAGACTTCCAATAGAAGATCCTTATTTAGAAGATCCAGAAGCAGGAGGAGGATGTCTAGGGCCATTAGCGTATCAACCCATTCCGTTTAGCAAAGCCGGGAATCCTGTCATGTCTACCGTCGCCTTTCTCGCATCAGTGGTGGATCCGAGAGTCGCAGCCTCAGCCGCCAGAGCTGCCATGGAAGAATTCGCGAATATAAAAGATGAAGTTCCTGCTGCTTTAATGGATGCTCACATCAAAAATGTGGAAGCTTCTACTACCGATGGGAAATTCGACCCTACAGCAGGTTTGGCACAAAGTGGAATAGCTGGAACAAGTCAGGAAAAAGAAGAAGAGGAGAAGGAGAAAAAAGATGAGGAAAAACCGGACGTGGAGAAAAAACCAGAAAAACAGGAACCCATGGAAGTGGACTCGGATACTAAACCAGAAGAAACGGACAAGAAGGAAAACAATATACCGGAGACTCCTGCTCAAGCTACAACTCCTGCTCCGGCTTCTACCGATGGAGAAAATGCAGTTCAGCAGGATGTTAAAAACGGAGATGTTGATGGGAAAGTTGAACCGGTTGCTCCTGAAACGGAACACGATCGAGTAGTGAAAGATGCTCAGTTACAAACTGCTGCGGCGGCTGCTTTGGCGTCGGCGGCGGTAAAAGCGAAACATTTAGCAGCAGTCGAGGAGCGGAAAATAAAATCATTAGTCGCTCTTCTCGTCGAAACTCAAATGAAAAAATTAGAAATAAAACTTCGACATTTTGAAGAGTTAGAAACGACAATGGAAAGAGAAAGAGAAGGTCTGGAATATCAGCGACAAACATTAATAGCCGAGCGACAACAATTCCATCTAGAACAATTAAAAGCCGCCGAATTTAGGGCGAGGCAGCAGGCGCATCAGCGACTTGCTGTCGAGCAAGGCGGTCAATGGCCCCCTCCAAACATGGCCCCTACCAACCAGGTTGGCTAA
Protein Sequence: MMTTTGPKKDGGPNVKFFESPETLSLLDGVKSWLQKNCKKYVQADPPTAKSLSALVIQLVQFQEDNFGKNVSKPPLTRLPMKCFLDMKPGGALCHILATVFRFKSEQGWRRFDFQSPSRMDRNVEMFMQVEKALIQAKCLTMPNVFIRSDVEKGLQSKIKDIIKRHQGTITDNEDEATHIIYPPCDPLDEEYARPSMKRDKCVLIHWYYFPDSHDSWAQIDVPVDPPDSPPAHIGPWRVGATWALELEQYNEWMTEEDYEVDENGKKKVHKLRLSVDELMASCDPSSKKKPNKRKKSPSPPPKSVSKRKSARGPPTPAVANKKHKGEEESEDLTKDMDDPPSDTNIQEVNCTKPGTSSKKDNDLQPIKGGTITDIEEADMDKVDENSQNTKNSDSNTQDKEKDRDKDKDKDAKQEDNVTEQTHHIIIPSYSAWFDYNSIHIIEKRALPEFFNAKNKSKTPEIYISYRNFMIDTYRLNPTEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDSDSRPTPIGPPPTSHFHVLTDTPSGLQPVNPVKTPQPSAAKMLLDMDKKDKEKEIKKEPMDIGSNFGLKLDQYAKKPAALKNKAAAGITRDWTDQETLLLLEALELYKDDWNKVCEHVGTRTQDECILHFLRLPIEDPYLEDPEAGGGCLGPLAYQPIPFSKAGNPVMSTVAFLASVVDPRVAASAARAAMEEFANIKDEVPAALMDAHIKNVEASTTDGKFDPTAGLAQSGIAGTSQEKEEEEKEKKDEEKPDVEKKPEKQEPMEVDSDTKPEETDKKENNIPETPAQATTPAPASTDGENAVQQDVKNGDVDGKVEPVAPETEHDRVVKDAQLQTAAAAALASAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETTMEREREGLEYQRQTLIAERQQFHLEQLKAAEFRARQQAHQRLAVEQGGQWPPPNMAPTNQVG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01251007;
90% Identity: iTF_01251007;
80% Identity: -