Ccol016343.1
Basic Information
- Insect
- Columbicola columbae
- Gene Symbol
- dnajc2
- Assembly
- GCA_016920875.1
- Location
- JADMLL010000002.1:2914589-2919291[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.00016 0.17 11.9 0.0 3 31 438 470 436 488 0.74 2 2 1.5e-14 1.5e-11 44.1 0.1 3 44 547 592 546 594 0.91
Sequence Information
- Coding Sequence
- ATGGTCGAGCAAAGACAAATAGAAAATGATGTCGTCCAAGTTTCAAGACTAACCACCCGTCGGGTACAGTGTGTAGGTCCAAATTTTTTGAAGTATTTCAAACGTCTGGAGGGACACTCCGGCTTTGACGAATCACTCGAAGAAGACGATGACAGCGTTGAAGATAGGTCGGATATAGTGTTCGAAGATGATGTGAATTTTCTCAGGAAATTAGATCCAAAAGATTGGAAAAACCAAGATCATTATGCTGTGTTAGGAATGAAATGGCTCCGCTATAGAGCAACTGACGACGATATAAAGAGGGCCTATCACGCTAAAGTTTTGAAACATCATCCTGATAAACGTAAGGCTGCTGGAGAAGAAGTCAGGCCAGGTGATGACTATTTTACATGTATTAGCAAAGCATGGGAAATCTTAGGTAATAAAGAAAAGAGGAGGTCCTATGATTCTGTTGACCCATTGTTTGATAATTCTATTCCACCAAATAATGACAATTCAAGAAATAATTTCTTTGAAGTTTTTGGGCCTGTGTTTGAGAGAAATGCTCGATGGTCTGAAAAGAAACCAGTACCTAAATTAGGTGGAATGCATTACACCAGAGAACAAGTTGATAAATTTTACTCCTTTTGGTATAATTTTGAATCTTGGAGGGAATACTCATATTTAGATGAAGATGAAAAAGACAAGGGTCAGGACAGAGATGAGAGAAGGTATATTGATAAACAAAATAAAGCAGCTAGGGCAAAGTTAAAAAAAGAAGAAATGACTAGAATCAGGAATTTAGTCGACACAGCTTATGAACTGGATCCAAGAATAATAAAATTTAAAAATGAAGACAAAGAAAAGAAATTAGCCCATAAAAGAGCTAAGCAAGAAGCTTTAAAAGCAAAACAAGAAGAAGAAGAGAGACTACAAAAAGAAGCTGCTGAAAAAGCAAAGAGAGAAAGAGAGGCACTTGAAGCAGAAGAAAGAGCCAGAAAAGAAGCTTTGAAGCAGGAAAGAGAATCAATGAAAAAGCAAATGAAACAAAAAAGAAAAGCTTTAAGGGATTTATGTAAAGCTAATAACTATTATGTGAATGATGATAGTGAACTTGTACATCATATGACGGGGGTAGAAAAAATTTGTGAAACTCTTCAGTTATCAGATCTCACAGATTTATTGGAAAAAATTCAGCTTGATGGTCGTGAAGCCCTCATAAATTCAATTACTGAAATTGAAAAGAAATTGGAAGAGGAAAGGTTAGCACACTTGAAAGCTTCTTCTGGAGGTGATAAAAATGATGCTAGCCCAAGCAGTAAAAAAGGCAGTAACTGGACAATTGAGCACTTGCAACTGTTGATAAAAGCAGTAAATTTATTTCCTGCTGGGACAAATCAGAGGTGGGAAGTAGTTGCAAAATTTATTAACCAACATTTCCCTGATGACGTAAACTTAACTGCAAAGGAAGTTTTGGCAAAAGCTAAAGATCTGCAGAATAATGACTTCTCCAAAAATGTCCTGAAAGAGACTGCAAACAAAAATGCATTTGACAATTTCGGAAAAGAAAAGAAAGTTGCTAAAACTTTGGAGGCAGTTGGTGATAGTAGCAAAACAACTGAGCGATTTGAGAGTCCTGCTGAATTACTAGGTCTAACTCCATGGACAGCTAATGAGCAAAATTTACTGGAACAGGCATTAAGGACTTATGGGCCAAATACTCCTGATAGATGGGATGAAATAGCTAAATGTATACCTGGTCGCTCAAAGAAAGATTGTATGAAGAGGTACAAAGAGTTAGCAGAAATGGTTAGGGCTAAAAAAGCTGCCCAAGCAGCTGCAGCTAAGGCTTCAAAATAA
- Protein Sequence
- MVEQRQIENDVVQVSRLTTRRVQCVGPNFLKYFKRLEGHSGFDESLEEDDDSVEDRSDIVFEDDVNFLRKLDPKDWKNQDHYAVLGMKWLRYRATDDDIKRAYHAKVLKHHPDKRKAAGEEVRPGDDYFTCISKAWEILGNKEKRRSYDSVDPLFDNSIPPNNDNSRNNFFEVFGPVFERNARWSEKKPVPKLGGMHYTREQVDKFYSFWYNFESWREYSYLDEDEKDKGQDRDERRYIDKQNKAARAKLKKEEMTRIRNLVDTAYELDPRIIKFKNEDKEKKLAHKRAKQEALKAKQEEEERLQKEAAEKAKREREALEAEERARKEALKQERESMKKQMKQKRKALRDLCKANNYYVNDDSELVHHMTGVEKICETLQLSDLTDLLEKIQLDGREALINSITEIEKKLEEERLAHLKASSGGDKNDASPSSKKGSNWTIEHLQLLIKAVNLFPAGTNQRWEVVAKFINQHFPDDVNLTAKEVLAKAKDLQNNDFSKNVLKETANKNAFDNFGKEKKVAKTLEAVGDSSKTTERFESPAELLGLTPWTANEQNLLEQALRTYGPNTPDRWDEIAKCIPGRSKKDCMKRYKELAEMVRAKKAAQAAAAKASK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01251005; iTF_01164837;
- 90% Identity
- -
- 80% Identity
- -