Ccol001825.1
Basic Information
- Insect
- Columbicola columbae
- Gene Symbol
- ncor1
- Assembly
- GCA_016920875.1
- Location
- JADMLL010000007.1:9522947-9568279[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.5e-06 0.0047 16.9 0.0 4 43 485 524 484 526 0.98 2 2 1.6e-15 1.7e-12 47.2 0.8 3 45 836 878 834 879 0.96
Sequence Information
- Coding Sequence
- ATGGAAGCAGTTCAACCTTCAGTAGTACATTTAGATCATGGCGTTATGCCCCCACAATCACAAATGGCTTACGTCCAACGAAATTCTGCATTACACAACAGCATCCGGTCGAACTCACAACCAACGGACACTTCCCCGTACAAAACACAAAGAGGCTCGACGACAGCGCCGTCTCCTTTATCGCCGGGCGCTCGACAACCCAACGCTTACCCGTCTTACCAGTCCGGAACCGCCCCTGTCAGTCGCGAAACTCAAGCCATGCGATATCTTCAATCCTCGCCTTACACAGCTCCTGTTCCCTATCGGGATGTACCTAGTCCTTATAGGTCTCAGACGGGTCCGCCAGAAGTACGGAGCGGTACTCCACAAGTGGAGCTCGTGAACCTACGACCTGGGGAGCGGCCTAGAATATCTCTGCTCCCCAACTCACAGGAATATATAACGCCCATCCCTAGGACCTCCTGCAGAGATGATATAGTATCGGTTAGGATGGCTGTGGCCCAGCCACCCTCAGCAGCAGCATCTCCTCAACAAGATGTTGGGCAGCCGTTCAAGAAAATCCGTCTCGGCGAATCAAAACCTGATCTCCAGCAGCCCCTTCGAATAGACGTTAGGGAATCCCCAACAGCGTACACACCCCAAGTAGAAGCTATTTCACCGACACTTCCATCTGAAGACATTGCACTTCGCGCAACGAAAGAAGATCTTCTCCAGCAAATAAATAAAGTAGACAGGGAAATAGCAAAAACGGAGCAACAAATTTTCAAATTGAAGAATAAACAGCGGGAGTTAGAAGAGGCTGCTTCCAAACCAGTGGCTAAGAAAGAGGAAATAGAAGCAGAACAGCCTGTACACCAGAGTCCGGCTCAGAAAATTTATGCCGATAATAGAAAAAAGGCTCAAGAAGCGCACTCTTTACTCGACAGACTAGGTCCGAAAGTAGAAGTACCTTTATACAATCAGCCTTCAGATACTAGTGTCTATCACGAAAACAAAAGGCGGCATTTAACATTTAAGAAACGGCTAATAGAACACTTAAAGCAGCAAGCATCTGAAAAACAGTCGTACGATAAATTCCTTACGCTGACCTATAGTAAACTCATGTCGGAATGGCTTAGGAAAGTAGATAAAATTGAAAATTCCGCCAAGAGAAAGGCGAAAGAAGCGAAAAACAGAGAATTTTTCGAAAAGGTTTTCCCCGAGTTGCGAAAGCAGAGGGAAGATAAAGAACGGTTTAATAGGGTCGGTGCAAGAATTAAATCAGAGGCTGATTTGGAAGAAATTATGGACGGCTTACAGGAGCAAGAGATGGAAGACAAGAAAATGCGTTCATATGCTGTGATACCTCCTATTTTATTAGATTCTCGGCAAAGAAGATTGAAGTATGTGAATAATAATGGAAAATTAGAAGATTTTAGCAGAGAATATAAGGAAAGACAGTTATTAAATTTTTGGACTACTGCAGAGCACGAAGTTTTTAAAGAAAAGTACCTGCAGCATCCCAAAAATTTTGGTTTGATTGCCAGTTACCTAGACCGGAAAAACGTTTGTGATTGCGTTCAGAGATATTATCATTCAAAGAAACAAGAGAATTATAAGCAGTTACTAAGGAAATCGCGGCACGGTAGAACGCGATCGAGTAGAAACAATCCGAACGCTAAGGTGAATACGACAGCTTCATCAGCGACAACGCTAGTCGATGCCGTTCTCTCGACCACTGGTGTGACTACGCGTTTACAAAGGGAACAGTTACAGAAGCAAGAGCCGAAGGAAACAACGAATCATGTGATTTTAAATGATAGTCTAATATGTAGTGGGTCTAGTTTAATGATAAATACGACCACTACTTCGGTCGTAACAAGTGTTAGCTCAAATACGGTATCTTACACGAACAGTAATAGTAGTGCCAATAAAGAACCAGATAAAGACGTGAATTCAAGTAATACAACAACCACCATAAACGTATCGACTGCCGCTTCAAATTCGGAAAATAAGGAAAATGCAGTGAAAATTAGTGACGCGAAAGTGGAGAATAAAAAAGGAAAACGGCGGAAAGGTGACAAAAAGAAAGAGGAGTTGGAAACGTCGGATGAGGAGCTAGGAGAATCAGTCGGCGAGAAAGGTGGCTCACATCCGTGTGTGGTTTGCAAAGCTACGATAGAAACGTATGCTCATTCAAGACCACTGCCTAGATCCCATGCTTCTGAATACGGGATATCGGAGGAAGATATTCCGTCGGGAGGCCGAGTTTGCAACACTTGTAGGTGTAAGGCTGTTCGATCTCGTTGCACCACATGTCCTCTGCCGACGTGTCCGAACGCAAAGGGACGAGTCAAACGGTTGCGAGCTCTTCCTAACAAATGGTCGGAACTTCCACCTGAAATCAAGGATCCAATAATTGCGGAATTTCAAATACCATCAACTTTAACGAAATGTTGTTCAGCTTGTTTTAATCGGATATCTAGAAGATTGGCTCCTCACATAGCTCCTGAAGAAGAAACGCTTCGTTGGTCAGAGGAAGAAACGGAAGCTTTGAAACGAGCTTTAAAAGAACACGGAACTTCGTGGTCTAAGGTTTCCGAAAAAGTGGGCACAAAGACGCATCATCAGTGTAAAAGCTTTTATTTCAATTGCCGGAAAAAGTTGGGCCTGGATCTCTTGGTTCAGGAATACAATAAGACTCATTTAGGTGAAGACAGAAAACCTGCCGTAACGGATGAAGAGGAAAGTGGTTCATCGACTTCAAGCTGCGACGAAATGCCTCCTGGAGCTCACGATTCGAGCGACACGGCCAGTGCCTGCAGTCCAGGAAGAGGAACCGAACCCGTTTGTCCAGCCGGTAAAGAGGAGACCGTATTGCGACCTCCCGAAACTGCTGCACCTGGTGAAAGTCGACCTGAAAAAGATTACGACAGTTCTGCTACGCATTGTTTCCAGGAGACGGCTGATGAGGGACAGGGTGGCGGGGACAGCGAAAACACGTATCCCCATCTGCCCGGAACCTCTATCACAGCTGTCCCCCCCGGCGGGCAACATCAGCAACAGCAGAACGGACCTATTTCGAGTCCTCCTAAAACCGTTAAAGATTTGATGGCGAACGTGATAGAAAAAACTCTGATGAAAACACCGGGAATGACGGTGTCTAGCTCTGCTGCACCGACAATATCGTCAATTCTTAAAACTGATCATAGAGATTTAGCCTTCGTGAAGCGATCTGGATCTGATTCCCTCGCTACACTATCGATCGTCAACTCTCATGACAGAAGTCAGGAATCATTGTCTCCATCTGTAGTTAATCAAGCTCCCGATCTACCTAAGGAAGGAATTGTTGTCGTCCAGGTTCAGCAGGCACTGAAAGAACGACGTGAACCTGAGCCAGAGACATTGGATCTGTCGATAAAGAAGCGTGATAGTCCTAGTGGATATCAAAACTCACCATCACATCATTTTAATCTTCCTCCTATTTCTAAAGGGGGAGCCACTGTGTATCAGAGAGTTGGCGAACCGCATTACTATCACCATTCTCACCAAGTTTCTGAGCAGAATAGAAGTTTATCGAAATCTCCGTCTGTTTTTACTTCTTCACCCGTTGCTCCCCATTTGGTCATTTCACATACAAGGCAACCGCATTCCAAAATTACTAAGTCTCCATTGCCCACGATGCAGGCAAAATTATCTCCGAAATTAGTGACAGGTCCTCCAGGTGCTAAAGGAGGTTCCATAACCCATGGAACTCCTCTTCAGGGAGGACCCAGATACGAAGGATTGCTTCGACAAATGCCTCCTCAGCAGTCCCATAAAGAAGGAGGATCTATAACTCAGGGAACTCCCGTACATCATGGATCTCATTTGGGACCGACTGATAAAAGGCAACCGATTAATTACGAGTATTTCAAGAGGAGTTCTCCTGCCGGGAATCCAAGCCCAGGGAACTCGGGACAACCTGTATCGTCTTCGTACCCTTACGGTTCTTCTCCAAGTCAGCCGTCCTCGGCATCCGGGTTTAACTCACCCTATCCTCCAAACCCCACCAGACAGCCTACGTCGTACCCTCTAGAGCAACAATTATCATCGAGACAAATTATCATGAACGATTACATCACGTCGCAACAGATGCATGGTCAGAGAAGGGTTGCGATTCCTGCGAGCGAGAAACAGGATTCTCCTTCACCCAGACCAGGAGTTGGGATTTCAACTCCCATGTTTTACAATACTCCTCCTCCTGCAGGAATGTATCTTCGAAGTAGATCGCCCGTGGACAGTCCGACGCCTCCACCTCTGCGTCAGGGAGTTATTCAACGACACAATACGATCCCTACCTCTCAGGGACAGTCCCGACCACCAAGTGGAGGGAGCACTAGCGGGAAATCACACTATCCGCCTCCGGGACACGAAGCTTTTAGTTCTCTAGTGGAAGCCGCTGTTCAGCAACCTTCACTGCCTGTTCCTTCGGCCGAAAAACGAACTCATTCCTCAGACAAACAGCCTCACATAAGTCACAGAGAGCCTCATCATGAAGGATTAGGTAAAACAATGGTCGATTCCTTATCGTCTTCAAGAATAATCGATCATCAAGGAAGGGTTCAAGGGAATGAAGTAGGAGGAAGGTTGCCGGTAGAACCACAACGATTAGGAGATCATCAAAGATTAGCCAGACAAAATCACGAAAGGGAGAGATATGCACAAGAACAGAGATTTCAGGCCGCTAGAGAAAGAGAGCGAGAACGGGAAAGAGAACAGATACAAATGCAACAACAAATTCACTTACAGCGACAACAACAGGCTAGGATAGAATATGAAAACCGACAGCAAAGAATAGATCAACAGCAGAGACTAGAACAACAAGCAAGAATAGATTATGAAAATAAGACGAGAATGGAACAGATGCGAATGGAGAGCGCTAGAATAGAACAGCAACAACAGCAACAACAACAAACACGACTAGACTATGAAAAGCAGAGACATCAGCAACAGTTAGCCGCGTTTATGGATGCTCAACAAAGAGCGTCTTCAGAAAGAGAGGAAAGGGACCGCGAACGTGAGAGAGAAAGGGAGAGGGAAAGAGAACGGGAAAGGGAGAGAGAAAGAGAAAGAGAGCGGGAAAGGGAAAGGGAGAGGGAGAGGGATCGGGAAGCAACCAGAATTTTAGTTGGAGGGTTTCAAAGAGAAAGAATATCAAGGCCTAGTAATGATTCTCCTTCTCAAGTTAGGAATCCATCAAATTCGAGTAGTCAGTCAAACAGAGGAGAAGACTCAACTATGACTGCTGCTAGTTTAATCGACGCAATTATAACACACCAAATCAATCAAAGTAGTACAGAAACCGGAAATTCTAGTTCACAGAGTCAAGGCCCTCCTACAAGACCCGGTGATCGTCTCTTCCAGGGATTTCATCGTGATGGACCTTCACAACATGCAGAGACCAATGGGAAAGTATCCCCAATGAAGCGAGTACCAAGTCCACCAGAGCGGGAACCACCAGCAAAACCCTTGACATTAGGAGAACACATTGAATCGATAATAACAAAAGATTTTAATAGGAGTTCTTACCCGTTACAGTATCACGTCCCGTCAGAAAGTTTGTCAATGGCCGAACAACCTAACTGGAAATTAAGAAGACCTGGAATGCCTCCAAAAGAAAGTGAGCCCCCACGAGAAGTACCAGCCGATAAAGGGGACGAGAGGCAAATTATTAGAATAGCCCAGTCTCAGCCAGGTGCCAGTAAATCCTTTCACGAACCTGTGTCGCCACCTGAACAGTGGGGTGGAAGGTATTATCCGGAGAAGCCTTCCCATTTGTCTCCGCTAGATTATGTTAAAAACCGAATAGTGGAAGTAATGAGAACTTCTGAGGATAAGGAAAGTGAGGAGAAGACGAGCGTGGTTAAGGACAGGAGCGACAGTCCGGCCGAGTTGGTAGTAGACGAATCAAAAACACCAGACAACGATATAAATAAACTAGTCGTGTATAACACTCCCAGTGTCACGTCCTCGAGTTCGTCACCCTTCGTGCCGCCAACGTCTTCGACTTACGCGTATCCTTATTCCGCTTTGTCAGTTCACGCGATGACAGCTGCTAATGCTCGAAGTCCCACCCCATCAAAACCGATAGTATCCACACCTACGAGTGTTAACAAAGAAGACAACACCTCTCAGCGTAATTCCGAACCTGCTCCTCTGCTTTCTGCGCAGTATGAGCCTCTCAGCGACGAAGACTAG
- Protein Sequence
- MEAVQPSVVHLDHGVMPPQSQMAYVQRNSALHNSIRSNSQPTDTSPYKTQRGSTTAPSPLSPGARQPNAYPSYQSGTAPVSRETQAMRYLQSSPYTAPVPYRDVPSPYRSQTGPPEVRSGTPQVELVNLRPGERPRISLLPNSQEYITPIPRTSCRDDIVSVRMAVAQPPSAAASPQQDVGQPFKKIRLGESKPDLQQPLRIDVRESPTAYTPQVEAISPTLPSEDIALRATKEDLLQQINKVDREIAKTEQQIFKLKNKQRELEEAASKPVAKKEEIEAEQPVHQSPAQKIYADNRKKAQEAHSLLDRLGPKVEVPLYNQPSDTSVYHENKRRHLTFKKRLIEHLKQQASEKQSYDKFLTLTYSKLMSEWLRKVDKIENSAKRKAKEAKNREFFEKVFPELRKQREDKERFNRVGARIKSEADLEEIMDGLQEQEMEDKKMRSYAVIPPILLDSRQRRLKYVNNNGKLEDFSREYKERQLLNFWTTAEHEVFKEKYLQHPKNFGLIASYLDRKNVCDCVQRYYHSKKQENYKQLLRKSRHGRTRSSRNNPNAKVNTTASSATTLVDAVLSTTGVTTRLQREQLQKQEPKETTNHVILNDSLICSGSSLMINTTTTSVVTSVSSNTVSYTNSNSSANKEPDKDVNSSNTTTTINVSTAASNSENKENAVKISDAKVENKKGKRRKGDKKKEELETSDEELGESVGEKGGSHPCVVCKATIETYAHSRPLPRSHASEYGISEEDIPSGGRVCNTCRCKAVRSRCTTCPLPTCPNAKGRVKRLRALPNKWSELPPEIKDPIIAEFQIPSTLTKCCSACFNRISRRLAPHIAPEEETLRWSEEETEALKRALKEHGTSWSKVSEKVGTKTHHQCKSFYFNCRKKLGLDLLVQEYNKTHLGEDRKPAVTDEEESGSSTSSCDEMPPGAHDSSDTASACSPGRGTEPVCPAGKEETVLRPPETAAPGESRPEKDYDSSATHCFQETADEGQGGGDSENTYPHLPGTSITAVPPGGQHQQQQNGPISSPPKTVKDLMANVIEKTLMKTPGMTVSSSAAPTISSILKTDHRDLAFVKRSGSDSLATLSIVNSHDRSQESLSPSVVNQAPDLPKEGIVVVQVQQALKERREPEPETLDLSIKKRDSPSGYQNSPSHHFNLPPISKGGATVYQRVGEPHYYHHSHQVSEQNRSLSKSPSVFTSSPVAPHLVISHTRQPHSKITKSPLPTMQAKLSPKLVTGPPGAKGGSITHGTPLQGGPRYEGLLRQMPPQQSHKEGGSITQGTPVHHGSHLGPTDKRQPINYEYFKRSSPAGNPSPGNSGQPVSSSYPYGSSPSQPSSASGFNSPYPPNPTRQPTSYPLEQQLSSRQIIMNDYITSQQMHGQRRVAIPASEKQDSPSPRPGVGISTPMFYNTPPPAGMYLRSRSPVDSPTPPPLRQGVIQRHNTIPTSQGQSRPPSGGSTSGKSHYPPPGHEAFSSLVEAAVQQPSLPVPSAEKRTHSSDKQPHISHREPHHEGLGKTMVDSLSSSRIIDHQGRVQGNEVGGRLPVEPQRLGDHQRLARQNHERERYAQEQRFQAAREREREREREQIQMQQQIHLQRQQQARIEYENRQQRIDQQQRLEQQARIDYENKTRMEQMRMESARIEQQQQQQQQTRLDYEKQRHQQQLAAFMDAQQRASSEREERDRERERERERERERERERERERERERERERERDREATRILVGGFQRERISRPSNDSPSQVRNPSNSSSQSNRGEDSTMTAASLIDAIITHQINQSSTETGNSSSQSQGPPTRPGDRLFQGFHRDGPSQHAETNGKVSPMKRVPSPPEREPPAKPLTLGEHIESIITKDFNRSSYPLQYHVPSESLSMAEQPNWKLRRPGMPPKESEPPREVPADKGDERQIIRIAQSQPGASKSFHEPVSPPEQWGGRYYPEKPSHLSPLDYVKNRIVEVMRTSEDKESEEKTSVVKDRSDSPAELVVDESKTPDNDINKLVVYNTPSVTSSSSSPFVPPTSSTYAYPYSALSVHAMTAANARSPTPSKPIVSTPTSVNKEDNTSQRNSEPAPLLSAQYEPLSDED
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -