Ccol004191.1
Basic Information
- Insect
- Columbicola columbae
- Gene Symbol
- CoRest
- Assembly
- GCA_016920875.1
- Location
- JADMLL010000006.1:400708-407745[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.5e-08 1.6e-05 24.8 0.0 3 46 130 173 128 173 0.96 2 2 1.2e-14 1.3e-11 44.4 0.0 3 46 248 291 246 291 0.97
Sequence Information
- Coding Sequence
- ATGGTTTTAGCAGAAAAAAATAACTCGAACATTAAGAACGGACAACGGTCTCGAGGACCTAGTCCCAACGGAAATGGGGGTCCAAGTCCCGTATCGCCAATGGATGATGAAGGGGAAAAAATTCGAGTCGGAAGAGATTACCAGGCAGTATGTCCTGAATACATCCCTGCAGAAGATAGAAAACCTGAGAATGAAATGAATGATCGAGCACTTTTGGTTTGGTCCCCCTCTAAAGATATTTCAGATGATCAATTGGATAAATATATTCAAATAGCAAAAGAGAAATATGGATATAATGGAGAACAGGCTTTAGGAATGCTATTTTGGCACAAACATGATTTAGACAAGGCTGTGTTAGATTTAGGAAATTTCACACCTTTTCCTGATGAATGGACTGTTGAAGACAAAGTCTTATTTGAGCAAGCTTTCACATTTCACGGAAAAACATTTCATAGGATAAGGCAAATGTTGCCCGACAAATCAATGGGTTCCTTAGTAAAATACTATTATTCGTGGAAAAAAACACGAACCCGAACATCTTTGATGGATAGACAAGCTAGAAAATTAGGAGGAGTGAAAGAAGAAACCAGTGAGTTGGGAAGTGAACAAGGTTCTAACACGGATTCTGAAAATGAAGACAAGGTACAAAACAATAAACAGACTCTGAGCAGTATGAAAAGAAAGATAAATGAAAATATTCAGGAGCTGCGTCCACCCGAAAATATATCTCGAATTAATTCCCGTTGGACCAATGAAGAACTCATGCTGGCAGTTCAAGGAGTAAGAAAGCATGGGAAAAATTTCAAAGCAATAGCAGAAATCATTGGAACCAAAACTGAAGCGCACGTGCGGAATTTCTTTGTGACTTATAAAAAAAGGTACAACCTGGATGTTGTTCTGAAAGAATATGAAGCTGAAAACGGACTCATTATTGACATATCAGAAGATAAAGACGATAAAAAAGACGAGAAGATGGAAATCGAGAGTGAAATTATGGACGCTAATTCGCAATCAGCAGTAGCGAAAACAACTGTGGCCGCGGGACAACTTTCAAAATAA
- Protein Sequence
- MVLAEKNNSNIKNGQRSRGPSPNGNGGPSPVSPMDDEGEKIRVGRDYQAVCPEYIPAEDRKPENEMNDRALLVWSPSKDISDDQLDKYIQIAKEKYGYNGEQALGMLFWHKHDLDKAVLDLGNFTPFPDEWTVEDKVLFEQAFTFHGKTFHRIRQMLPDKSMGSLVKYYYSWKKTRTRTSLMDRQARKLGGVKEETSELGSEQGSNTDSENEDKVQNNKQTLSSMKRKINENIQELRPPENISRINSRWTNEELMLAVQGVRKHGKNFKAIAEIIGTKTEAHVRNFFVTYKKRYNLDVVLKEYEAENGLIIDISEDKDDKKDEKMEIESEIMDANSQSAVAKTTVAAGQLSK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -