Ccol013689.1
Basic Information
- Insect
- Columbicola columbae
- Gene Symbol
- -
- Assembly
- GCA_016920875.1
- Location
- JADMLL010000010.1:8591261-8593135[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.014 15 5.7 0.1 4 46 203 261 201 261 0.66 2 5 5.3e-07 0.00056 19.9 0.4 1 44 267 312 267 314 0.94 3 5 8.9e-11 9.3e-08 32.0 1.6 2 46 319 367 318 367 0.97 4 5 1.4e-05 0.014 15.4 0.0 1 43 372 413 372 416 0.95 5 5 3.7e-13 3.8e-10 39.6 0.1 3 43 422 462 420 465 0.95
Sequence Information
- Coding Sequence
- ATGGATGATTGGTTTAAGTCTTTGGAGAAACTCAGTTCTCCACCTGGAAATCCAATTTTTAGTGGGAATTCCGAAGACAGCGGGATAAAGTTTCAAAACGAGCAAGAAGCCATCGAAGAACTATGTCAGATTGTAGATGAAAATTCAAACGGAGGTGAAAAGCAGAATGTTACTCCAAAAAATATTGACAGCAGTATTATTAAAGAAACACCAACTACCCACAGTGAGGATATCTCTCAATTTAGGTTAAAAGATCCTCCTGATGTTGATGAAATTTTGTCGACAGAAGAATCCTCCATCACACCCACAGCACATAATGTTGGAATTATTAATTCTGCTTGTCAGCAAGTTCTCAAAGAAATGGAACAGCAACTCCTGGCATTATTAAAGAAGAACAGGAAAGAGCAGGAAGTAGTTTTAAGTTATCTCAACTCGAATGGTAAAGGTAAATTTAATGAACCCATTAGGAAGTCAAATCTTACATGTCTTGCAATGCCATATTTTAAGGATTCGCAGGGCTACTTACCTCCTCAGAATAAAGACGTTTTAAGGAAAATCAAAAATAATAAAATGTTACCAGCTGAGTTCATAAAGAATCCAGCATGTTGGAGTAATACAGATGCAAAGAAACTGATAAAAGCTGTTAATGTGATAGTATCAAGAGATCCCACTGCTCACAAGGTAATTGATGCTGACAAAATCGACTGGATGAAGATAGCAGCAACTGACATGGATGGGAAATATTCGGCAACAGAATGCAAGTCCAAATGGATGATGAATTTAAGACCAGACATAAATAAAGGGAAGTGGAGTTTGAAAGAATATAAAAATCTCAATTTAATTGCCCAGAAGTTAAATTACCAAAACTGGGATGAGATAGCTAGATTGTTGGGAACAAATCGAAGTGGATTTCAGTGTTGTGTTAAATACCAGATGAGAAGACCTTCGAAATGTGGGAAATGGTCTGACGAAGAAAGTGAAACCCTGATGAGGTTGGTTGAGAAGTATCGAATAAAAGACTACATACCCTGGGCGAAAGTGACCTGGCATTTTGAAAGAAGATCACTCAGACAGTGTCAAGAAAAATATCAGTATCACTTGGCAGACATCAAAAAAGGTTGTTTCACAATGGAAGAGGATTATGTTCTTGTTTATCTAGCAGCCAAGTTAAAAAATTTCGGAGAAGTCGCCAAATATCTACCAAAGAGAGTGTCCACACAGCTGAGATCAAGATTTGAGTATCTAGTCAACCTGACAATGCCTGATTTCACCAAAGAAGAAGATGAGTTACTGACCAAACTCATGGTACTGTATCCTAGGAATTGGGCTAAGATAAGCGAGAATTTTGTAAATCGTTCAAAACTTCAATGCAGAAGGCGGTGGAGTGAATTACAGAAATCGCTCACCCTCGACACTGACGTCCACAGCGAGGCAAGCGATGATGATGTCAGTCAGGGGATAATTTGCACTGATAAACCGGAAACGGACGAATCACTGAAAGAGCTAATGGATGCAAAGACCATTAGAAAGAACCTGAGGATGGTATCAAAGGGTTCGGAAAGTTTGACGCGAAAGAGAGTGAAATATCCGGAAGTGTATAACCAACTTGTTGACTACTACAAATACTGTTACAAATTCTGTTTCGGTCCTAAATGTAGAACCGTCAGCAATTCCGAAGAAGCGGTTAAGCTATCCAAAGAAATGAAAATGGTTATGTCAACCTTGTTCGTTCATTCCGGAGGGCCTCTGCCTTCTTTTAAGATCGACACACTTTCAGAAAATTGTGAGTTCGATGAAGAAGACATCGCCATCTTGTCTGAGATGGCTAAATCACAACCTTCGGGTGAAGTATCCGAAGGAGAGGAGGAAGTCTGA
- Protein Sequence
- MDDWFKSLEKLSSPPGNPIFSGNSEDSGIKFQNEQEAIEELCQIVDENSNGGEKQNVTPKNIDSSIIKETPTTHSEDISQFRLKDPPDVDEILSTEESSITPTAHNVGIINSACQQVLKEMEQQLLALLKKNRKEQEVVLSYLNSNGKGKFNEPIRKSNLTCLAMPYFKDSQGYLPPQNKDVLRKIKNNKMLPAEFIKNPACWSNTDAKKLIKAVNVIVSRDPTAHKVIDADKIDWMKIAATDMDGKYSATECKSKWMMNLRPDINKGKWSLKEYKNLNLIAQKLNYQNWDEIARLLGTNRSGFQCCVKYQMRRPSKCGKWSDEESETLMRLVEKYRIKDYIPWAKVTWHFERRSLRQCQEKYQYHLADIKKGCFTMEEDYVLVYLAAKLKNFGEVAKYLPKRVSTQLRSRFEYLVNLTMPDFTKEEDELLTKLMVLYPRNWAKISENFVNRSKLQCRRRWSELQKSLTLDTDVHSEASDDDVSQGIICTDKPETDESLKELMDAKTIRKNLRMVSKGSESLTRKRVKYPEVYNQLVDYYKYCYKFCFGPKCRTVSNSEEAVKLSKEMKMVMSTLFVHSGGPLPSFKIDTLSENCEFDEEDIAILSEMAKSQPSGEVSEGEEEV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -