Ccol009360.1
Basic Information
- Insect
- Columbicola columbae
- Gene Symbol
- Myb
- Assembly
- GCA_016920875.1
- Location
- JADMLL010000001.1:17909863-17923887[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.1e-16 1.2e-13 50.9 1.1 1 45 50 94 50 95 0.98 2 3 1.1e-21 1.1e-18 66.9 2.4 1 46 101 147 101 147 0.98 3 3 9.7e-22 1e-18 67.1 1.2 1 44 153 196 153 198 0.96
Sequence Information
- Coding Sequence
- ATGAAAAGAACGACTGAAAGGCATCAATCCGGGTACGATTCTTCAACAGATGGAGACCTGTCTATTATGTCAGATGAATCTAATAGCGGAGCTGCTGACGAAATTCAACCAGGACAAGGTTTGCAGAGAGCTAAAAAAGCGTTAAACAAAGGCAGATGGAGCAAAGAAGAGGATATGAAACTGAAGCAATTGGTCGACGAATACAGCGAACGATGGGATTTAATATCACAGCATTTTGCAGACAGATCGGATATGCAGTGCCAACAGAGATGGCAGAAAGTGGTTAACCCAGAGCTAGTCAAAGGACCGTGGACGAAAGAGGAGGATGAAAAAGTTGTAGAGCTAGTTCGAAAATATGGCCCGAAAAAATGGACACTCATTGCGAGGCAGCTGAAAGGAAGGATAGGGAAACAGTGTCGAGAGCGGTGGCATAACCACTTGAATCCTAAAATCAAGAAAACAGCATGGACAGAAGAGGAGGACAGACTCATTTATCAGGCCCATCAATCTTGGGGAAATCAGTGGGCAAAAATTGCAAAACTTCTACCTGGCCGGACGGATAATGCAATAAAAAACCATTGGAATTCAACAATGAGACGAAAGTACGAAGATGTTAGGGACCGCAACACAGATGCGAGGAGGAGTAGAAAAATGAAAGTATTTAGGAATGAAGTTAAAAGTAAAGACCGGAATAAAGGCGAAGGACAGTCGAGGAAAGTTATTGATTATTCTCCTCACATGTCCGTGCTAAAGAGTAATTGGCCCTCATTTAGCAACAATCAGGCAGTTCAAATGGTACCTCAAACTCCTCCATTAAATGGTCAGAATTATGAAGGTCGTTTGGGAACGCCGACGAAATCGGGACAAGCTGGAGTTTCTCCGTTGAGCAATACAACACCAATGAAGAAAATATGGCATGTACCCGTCATGACTCCGGAAAAGAAAATCGTTCACGTACCTCTAATGACACCAGACAGACGACCCGTGGAGCTCAGCGAACTTCCGTTTAACCTCAAAGGAGACCAGATTTTCCCAACTAGGATCAAGCGAGAGGACGATGAGTTTATCACATCAGATTTCATGTCAACACCAATCAAAGGCACTCCAATTAAACAACTACCTTTCAGTCCATCACAGTTTCTCAATAGCCCGACATTGTCTTTTGATTCCACATCCATACGTAGAACAGCTCTTAATCTTCAGTCGACTCCCGTACACGAGGAAGAAAGAAGCAGTAGTCCTTTGACTACACCAACTCCGATTCCGTTGCAGAGGGAAAGCGATCATACGACGCCGACCAAAACGAGGAGGTCTCTAACCCCTAAAACGCCAACTCCTTTCAAAAATGCTTTGGCTGAATTGGAAAAGCAAAGCGGTCTTGTGAAATTTACCCCACAGACACCAACTAGACTTGTTGAGGATATAACAGAAATAATAAAGAAGGAACAAGATCCTTCTGACTCTCAGTATGAAACTGATACTTCTTACATCACACACTCAAGCAGTCAGAGCGTTGTCTCCGACAGCGGATATTCGTCGAAGAGAAAGGCTGGTATTCCCGTAGGAAAGGAAAACGCTCTTCCTCATAAAAAAGCCCGGAAGTCCCTTGTTTCGGCCTGGAGTACAATATCGGTTCCGGGTGTGACGGATGAGCCATTTTTTTCAGAAACACCCAGTAAGTCACTTCTCGGGAGTGAAAGTTCTGTACTGTTTTCACCGCCATCCATCGTTCGAGATACTCTACATGATGAGTTGGGAACCCATTTCATCTCCGAAGACCCTCTGCATCCTCATTCTACTAAGAGCGGCGTTCGGAAGCGAATTCTGTTTGCCGGGGATGTTTCCGGAAGCGAGGAGGACGAAGATTGTCCGAAGTTGGATGTAAGGTGGGAGATGGTGGCTTGTGGGAAAACGGAAGATCAACTTGAGCTTACTGAACAGGCACGTGTGTTATTGAATCTTAGTGCACTGAAACCCCGCTCCTTCAATGTGTAG
- Protein Sequence
- MKRTTERHQSGYDSSTDGDLSIMSDESNSGAADEIQPGQGLQRAKKALNKGRWSKEEDMKLKQLVDEYSERWDLISQHFADRSDMQCQQRWQKVVNPELVKGPWTKEEDEKVVELVRKYGPKKWTLIARQLKGRIGKQCRERWHNHLNPKIKKTAWTEEEDRLIYQAHQSWGNQWAKIAKLLPGRTDNAIKNHWNSTMRRKYEDVRDRNTDARRSRKMKVFRNEVKSKDRNKGEGQSRKVIDYSPHMSVLKSNWPSFSNNQAVQMVPQTPPLNGQNYEGRLGTPTKSGQAGVSPLSNTTPMKKIWHVPVMTPEKKIVHVPLMTPDRRPVELSELPFNLKGDQIFPTRIKREDDEFITSDFMSTPIKGTPIKQLPFSPSQFLNSPTLSFDSTSIRRTALNLQSTPVHEEERSSSPLTTPTPIPLQRESDHTTPTKTRRSLTPKTPTPFKNALAELEKQSGLVKFTPQTPTRLVEDITEIIKKEQDPSDSQYETDTSYITHSSSQSVVSDSGYSSKRKAGIPVGKENALPHKKARKSLVSAWSTISVPGVTDEPFFSETPSKSLLGSESSVLFSPPSIVRDTLHDELGTHFISEDPLHPHSTKSGVRKRILFAGDVSGSEEDEDCPKLDVRWEMVACGKTEDQLELTEQARVLLNLSALKPRSFNV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01251001;
- 90% Identity
- -
- 80% Identity
- -