Basic Information

Insect: Columbicola columbae
Gene Symbol: Mblk-1
Assembly: GCA_016920875.1
Location: JADMLL010000004.1:13476912-13550036[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 2 8.5e-18 1.8e-14 53.1 0.1 1 43 253 296 253 298 0.93

2 2 7.7e-19 1.6e-15 56.4 0.0 1 43 663 706 663 708 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	2	8.5e-18	1.8e-14	53.1	0.1	1	43	253	296	253	298	0.93
2	2	7.7e-19	1.6e-15	56.4	0.0	1	43	663	706	663	708	0.95

Sequence Information

Coding Sequence: ATGGCCGACTGCTCGTACGCCCGTTGTATGCAAGAACGTCGGACTATCAAAAAACACCTTCAAAAATGGACCAAAAATTGTATTTACACTTTGGGTTTTGAAAGAGTAGCAGAAGAATTTATGGGTCGAAGAAAATGGAGATTATATCAGGAGAAAGTACTCAAAAGCTGGTGTCCATCCATCGAAAAGGAAATAGAAATCAAAGACTGGGACCCGAGCGACGATAAATGTTCTTTCTGCGATCTTGAGCCGTCCGGGAAGGTGACGGACGACGAACCCGGTAGCCCTCTTCGTTCTGAGTGCTTCAACTCATCAGCCCATAACAACAATAATAATAATCACATTGACCTTCTGGAAGGTGACGACAGCGATAGTAATTCCTTAAGCTCTGCTGAGGATTCCATTTTGACGATGAACACTTTGGATTCCGTTACGTCTGCCATCGCCGCGTTGACGGCCCCCGGCGGAGCCCCAAATCCATTGCTCTACTCTCCCGGGGTCTTCCCTAGGTGGTATTTGCCCCAATCGCACAGAGCCTTATTAGAGGGGATGACCAAAAATGAACCACCGATGATTATGAGTCTCCCTGCGTCCGCAGGTTCGGAAATGCCATTAGATTTAAGTGCCAAATCTTCGAAACCACCACCAACGACAGACGGTGTAGAAAATAAAATAAGAGTACCAAATTTAACGGATAATAAATCCGTAATGAAGGGAAAACCTCGGATGAGCCCAATGTCCGGCAGAAGAACTTACACCGAAGATGAACTTCAGGCCGCTTTGAGAGACATTCAGAGCGGGAAATTAGGCACGAGGCGAGCCGCTGTGATATATGGTATACCTAGGTCCACACTTAGAAATAAGGTGTATAAACTTGCCTCGGAAAAAGAGAGAGACGCTCATTTGTTGTCAGCCTCAACCTCTCGACATTCATCCCCGACATTAACCGTGAACCACGAGAGAGAAGACTCAAGCGCCGATGACGAAAGGGAGCCAGAAGCCATCTCGAGGACAGCGACGACGACGAGCACGCCTACTTCGGAGACGGCAACGCCGACGACAAAACCGCCGTTGTCTATGGAAGACTTGATGAGACTTTCGGCTTTGGATAGCGAAGGACTCACAGCCTTGTTTCATAACCTTTCAAGGTTACACGCGGAAGGAATGAACGCGACGAATGAAATGGTGGCTTCGGGAAATTCCGTGCTCGGATCTTATTTGGCCCAGCTGCTCAAGTGGAAGGAAAATCTAAGTCCGGAAACAGACGGAAAAGACAAAGTGATTCCAATCAAAGACGACGGAGACAAAGGGAAAGACATCGAGGAGATAAACAAAGAAACGGACGAGCCCACGAGTCAGGACAGCAACGACAAAGCGAAATATTCTTCGTCTCAATTACCGCAGTTGATGAGAAGGATTTCGTCAGCCATGGCCGAGGAAAGGTTGTTGTTCGAGGAACAGCTGAAGAGGAAAATGGGAACCGAAAATGGAGTCGAAGATGATCAGTCAAATGTGATACTTAGAATTCCGTCCTTCAAACCGAACGTGAGTTGTTCGAAAGTGAACAATAATGGCGACGCCGATCAAAGATATTCGACGAGTCCCGCAGGTGCATCACAGGAAAACTCACGGCACAGCGTCATATCGCCGTCAATGTCGCTCAATGGAGATTCTGAATCGCCGCCGATGGGGAAATCCTCCATGGGGATCTCAAGTCTGAGGGACGTCATCGCCAAAAGTATTAGTCAAAAATTCCAGCAGGATGGAGTTCCCCCTCACGGATTGGGTTCTCCAGTATTAGGAGCGGAAGCGATGGACGCGTTGGCCAAAAGAGGAGCTTTCTCTCATCTGAACCTGCCTAATCCACATTCGGTATTGAAAAATCATTTCGATCGGAGTCAGCAAAGACCTCAACATCCGTCAAGTGCCCAAGTTAATACTCAAGGGAAAGGAACAAGGCCAAAACGTGGAAAGTATAGGAATTACGATAGAGACTCTCTAGTGGAGGCAGTTAGGGCTGTACAAAGAGGTGAAATGAGTGTTCATAGAGCCGGAAGCTATTACGGCGTTCCTCATTCTACTTTAGAATATAAGGTTAAAGAAAGACATTTGATGAGACCGAGAAAAAGGGAACCGAAAGGTGAGGACAAGAACAAGATAGCCTCATCCGGTTGTACTTCGGGAAGTGCGGGAACGTGCGTGGACAAACCGAAGCAAATTCCGTTGACTTCGAAGGCGAACGCTGCGAAACCGCCGTTTCCGAATCCCGCGGCTCTCCCCAACGGACTCAAAAGTATTTTCGAAACGGGAGTGTCCCCTCTGGCTGCCTATGCGGGATCCCCTTTTTCTTTCTGGCCACCGACGCCGTTCCACCCGTTACCATTGGACATATCGCGGGGAACGTTTACCACGACATCGGAACAATTCTTTGCGCCTCAGTTGATGAGAGGTGGAGGCGGTGGTGGGGGTGGTGGAGGAGTAGATGCACCTCCAAGTCCGTCCACTTTGCCTCCGAGCACTAGGAGAATCGCCGAATGTTTATATGACGGGACAGGAAACAGCGGCAGCTTTTTAGACGGTATAATAAGATCGAGTTTAGAAATGGGTGTGACTGCTTCTCAAAAAATGGACAAAGACACGGAAAAATCCGGAAAGAACACGGAAAACATGTCTAACAAAGCTTTATTAGATCAGTTGTGTCGGAATTCGAGATTAACTCCGGTTCCGCGGCCGAGCGGTGAAAGCAACTCGGACGACGACGGAACTCCGAGAAACGTCGCATTCGATCTGTCGAGGTCTTCGGATGACGACAACGATGATAGACGGCCGAGGAAAAGTCGCGCGATCGGACTCCGACACGGGTTCGGCGATAGGCGGTCATCCGAAAGAGAGCTGAAGAGGAGCTGCAGCGACAAAGATGCCACCGAGGAATGTTCCAGGTTGAAAGGGGAAAACGACGAGAAAAACTTTCAAGAAAATCGATCATATCGATCGTCGATGTCCGACGAGAACGACAAATCCAAAATCTCTTCGGATGTGGACATGAACGGGGACCAAGACGAGCTCAGCCCAGAGGATCTTCACGAAGATGAGGACGAGGACATCGACAACATTTCGAATCACGCAAGCGACGATGAAGACGTCAAAGACTCTTAG
Protein Sequence: MADCSYARCMQERRTIKKHLQKWTKNCIYTLGFERVAEEFMGRRKWRLYQEKVLKSWCPSIEKEIEIKDWDPSDDKCSFCDLEPSGKVTDDEPGSPLRSECFNSSAHNNNNNNHIDLLEGDDSDSNSLSSAEDSILTMNTLDSVTSAIAALTAPGGAPNPLLYSPGVFPRWYLPQSHRALLEGMTKNEPPMIMSLPASAGSEMPLDLSAKSSKPPPTTDGVENKIRVPNLTDNKSVMKGKPRMSPMSGRRTYTEDELQAALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLASEKERDAHLLSASTSRHSSPTLTVNHEREDSSADDEREPEAISRTATTTSTPTSETATPTTKPPLSMEDLMRLSALDSEGLTALFHNLSRLHAEGMNATNEMVASGNSVLGSYLAQLLKWKENLSPETDGKDKVIPIKDDGDKGKDIEEINKETDEPTSQDSNDKAKYSSSQLPQLMRRISSAMAEERLLFEEQLKRKMGTENGVEDDQSNVILRIPSFKPNVSCSKVNNNGDADQRYSTSPAGASQENSRHSVISPSMSLNGDSESPPMGKSSMGISSLRDVIAKSISQKFQQDGVPPHGLGSPVLGAEAMDALAKRGAFSHLNLPNPHSVLKNHFDRSQQRPQHPSSAQVNTQGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKGEDKNKIASSGCTSGSAGTCVDKPKQIPLTSKANAAKPPFPNPAALPNGLKSIFETGVSPLAAYAGSPFSFWPPTPFHPLPLDISRGTFTTTSEQFFAPQLMRGGGGGGGGGGVDAPPSPSTLPPSTRRIAECLYDGTGNSGSFLDGIIRSSLEMGVTASQKMDKDTEKSGKNTENMSNKALLDQLCRNSRLTPVPRPSGESNSDDDGTPRNVAFDLSRSSDDDNDDRRPRKSRAIGLRHGFGDRRSSERELKRSCSDKDATEECSRLKGENDEKNFQENRSYRSSMSDENDKSKISSDVDMNGDQDELSPEDLHEDEDEDIDNISNHASDDEDVKDS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -