Ccol001470.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Columbicola columbae
Gene Symbol
ct
Assembly
GCA_016920875.1
Location
JADMLL010000007.1:6932065-6960956[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 6.8e-28 3.8e-24 84.4 0.0 3 72 341 411 339 416 0.95
2 3 2.5e-31 1.4e-27 95.4 0.1 3 77 770 845 768 847 0.96
3 3 2.2e-30 1.3e-26 92.4 0.0 3 75 999 1072 997 1076 0.95

Sequence Information

Coding Sequence
ATGGGTCAGTACGCTGTTGTTCTCTTACCCTCTGCCTCTCTTATAAGTATACTGTTAAAAATTCATAGTATCTCACAACTAGTGCAAGATATTCAAAGACTGCAGTCTTCCATCAGCAAGTTGCAAGAAAACTCGGCGAGTCAAATCGCGAGGCTGGAAGAACAGCTGGAGCAGAAGAGGCAACATATAGCTCATTTGGAGGCAAGACTGGATGCTCAAAGGGACTACGAAGATGTCAAGAGAGAACTTAGTCTTCTAAGGTCTATCGAAGTACCTTCCAACGATTCCGGAGAGCCGAAAACGCTAGAAATGTTACTAGTTGAGAGATCCAAAGCGCTGCAACTCGATCAGCAATCACAACCTCAGCAACAGAAACCACCGCCGCCGCCACCTCCACCCCCTCCTCCCAAGACGAAGACGCCCGAACCGTCGACTGAAGAGACGCCAATAACGTCGTCGGAGCCGACGGTCGCGGATGCCGAGAATCGAGGTGATAGTCCGAGTGGTCAGCAGCAGGAGGAAGTCGAGCCGACGGAGGATAATGAGAAAGAGGAAACCGAAGAGGATGGTAATCATTCGTCTCCGCGCAGTCATCACAGCACCCAACCGGTGTCTCCGAACGTGCAAAATCAGTTGAATTCCTCGACGCCCTCTCTACAGTCTCCGTCGATGAGAACGCCGACGCCTCATGATAGTTACCTGAACGGCAAGCTACCGGACGATTGCCACAATAACAACCACATAACTCAGTTAATGAACAATCAAAACATGTTAACCAACGGTTTAAATTTAAATTCGTTAAACAATAACATAATTAATTTAAATCATCATAATTTTTTAAGAAACAGTGAAATGTGCATGGACATGAAAAGTCCTTTCCGGTTCGACGAACACCGGTACAGATTCGGGGATGAGAACGTAATGGTGGGACGACTCGGCGAGAGTCTGATTCCTAAGGGAGATCCGATGGAGGCGAGACTCCAGGAAATGCTGAGGTACAACATGGACAAATATTCGACGCAGAACCTGGATACGTTACACATCGCGCGAAGAGTCCGCGAGCTCTTATCCATACACAACATCGGTCAAAGACTGTTCGCTAAGTACGTGTTAGGTTTAAGTCAGGGAACGGTGTCAGAACTTTTAAGCAAACCGAAGCCCTGGGACAAATTGACTGAAAAAGGGAGAGACAGTTACAGGAAAATGCATGCGTGGGCATGCGACGAAAACGCAGTATTATTATTAAAAAGTTTGATACCAAAGAAAGCCGGGAAAGAAGGAAGCTTACCTCCGTTTGGTCGAGAAGGCGAGGGCCAAAATTTGACTGATGAAAGAATAGCGCACATATTATCCGAAGCATCTCACATGATGGTTAAGAATTCACTGAGTACTCCCCATCACGATGACCAAAACAGTCACGAAGAAGATTCCAAATCACCGATGAATTGTCCGTCTCCGATGTCGGCCAAGGAAAACAGTTTGTCGCGGAGGTTGAAGAAATACGAAAACGACGACATTCCACAGGAGAAAGTCGTCAGGATATATCAAGAAGAGTTAGCGAAATTGATGGGTAGAGGGCCAGGTGGGCCTCACCCTTTTCCAAGCTTGCTATTCCCCAATTTTTTCGGAGGACCTCCAGGGACTATGGATAGATCTCAAGAAGACATGAGAATGGCTTTAGATGCATATCATAGAGAATTAGCCAAGCTCAACTCTTGTCCAAGTCCCGGATTACCTGGATTGCTGGCTCTTCAACAACAGGCCATGCACCAGCAGACACCATCTCAACAGCAGAATGGCGGAGCCCAAGATTTATCGTTACCAAAGGAAAGGAAGTCCGAGACTCCTGGACCTCCAAGCACACCAGGATCAACGACGGAACGACCTGGCACGGCTCAAAGTCACAAATTGGTGAACGGGGTTGTGGAACCATCCGAAAATGTGGATAAAGACAGAGAGCGTGATTTGCTGAAAAAGGAAAGCGGTATGATGGATTCTTCGGTAGCAGAAGCCATTCGCCATGCGGGTTCGGCTTTTTCCTTAGTTCGCCCAAAGACTGAACCAGATTGGCCACAACCTTCTACTGGGTCAACTGCATCATCACCGCTGTCGAATTCTATTCTTCCTCCCGTGTTAAACCCTTCCGATGATCTCGTGACATCATCAGCGGCAAGCCCACTTCAGAGAATGGCATCCATCACTAACAGTCTTATATCTCAACCGACTGTACCGTCGCATCACACGACAAATCAAAGGCCACTCAAAGCTGTTCTTCCTCCCATCACGCAACAGCAGTTTGATATGTTCAACAATTTAAATACGGAAGAAATAGTTAAGCGGGTTAAAGAGCAACTCAGTCAGTATTCAATAAGCCAAAGATTGTTTGGCGAGTCAGTTTTGGGTTTATCTCAAGGATCGGTGTCAGATCTCCTCGCTAGGCCCAAATCCTGGCACATGCTGACTCAGAAAGGAAGAGAGCCATTTATTCGAATGAAAATGTTTTTGGAAGATGAAAACGCCGTTCACAAATTAGTTGCATCACAGTACAAGATATCACCTGAGAAATTAATGCGAACTGGAGGATACGGAGGAGCAACAATTAATCCATCTCCGATTCCACCAAAGCATCCAATGCCACCGACGTCAAAGCACAGTGATCAACTGAGCAATATGGCTGCGAACATTCTTCAAGCTCAGCAACAGCATCAGATGGAGCAGAGAGATAGAGAACAACGCGAAAGAGAACGGAAAAACATGGAACGGGAAAGGGAAATCATGAGAGAAACTATATTGCCGCCATCACTGAACATAATTCCTCCGACGAATAATAGCATGCTGGGATCACCTCCCTCTTTAAGCGGTCTTATGGTCGCGAATGATCTCAAAAAAGGTCTTACTCCTGGCTCTTTGCCTCCTCAGCCACATCAGCTGACCAATATGCGAGCTTTGCATCAACATATCTCACCCAGCGTTTACGAAATGGCTGCTTTAACCCAGGATTTGGACACTCAAATCATAACCACCAAAATTAAAGAGGCTTTACTAGCAAACAACATTGGACAAAAGATTTTCGGAGAAGCCGTTCTAGGTCTTTCTCAAGGATCTGTTAGCGAATTGCTGTCAAAGCCAAAACCCTGGCACATGCTTAGTATAAAAGGAAGAGAACCTTTCATTAGGATGCAGTTATGGTTGTCGGACGCGCATAACATCGACAGGCTACAGGCTTTGAAAAACGAAAGAAGAGAACTGAATAAGAGGCGTCGCAGTTCAGGACACGGAGGTGACAATTCCAGTGACACGAGCAGTAACGACACGTCCGAGTTTTATCATTCAGCAAGTCCGGGACCCGGACCTCCTTCCGCCAAAAAGCAAAGGGTTTTGTTCAACGAGGAGCAGAAGGAAGCTCTCCGGCTGGCATTCGCGTTAGATTCATATCCAAATGTAGCCACTATAGAATTTTTAGCTAACGAATTAGGGTTATCTCCGAGAACAATCACGAATTGGTTTCATAATCATCGCATGAGACTAAAGCAGCAGGTTCCACATCCGCAAGAGTCGAATCCAAACGTTCAGAGAGATCCTCAACAGCCATTCGATCCAGTGCAATTTAGGGTTCTCTTAAACCAAAGACTTTTAGAAGTACAAAAAGAAAGGCTTGGACTTGGCAGCGTTCCACTTCCGTACCCGCCGTATTTTGCTAATAACAATTTAGCTACGCTAATTAGTAGAGGACTGATATCGCCTGAGTGCGAAAATATATTAGCAAACGTGGCCAAGGAACAATTCGGTGGACTGGACTTAAGCATGAGCGGATTGAAAAGAGAACCTTACGATGATGAAGACATGGGAAGCGAATTGGGTAGCGAGGATTCCAATCTGTCTTCAACCAGCATCAGGGGACGTGAAAAAGAAAAAGGAAGAAGGAGACGATCTGGAAGAGGAAAGAACGACGGCATCAGCCGGAGGGAATCGAAGTTCCAGACGCAAACCCGCCGCACCCCAATGGGTTAA
Protein Sequence
MGQYAVVLLPSASLISILLKIHSISQLVQDIQRLQSSISKLQENSASQIARLEEQLEQKRQHIAHLEARLDAQRDYEDVKRELSLLRSIEVPSNDSGEPKTLEMLLVERSKALQLDQQSQPQQQKPPPPPPPPPPPKTKTPEPSTEETPITSSEPTVADAENRGDSPSGQQQEEVEPTEDNEKEETEEDGNHSSPRSHHSTQPVSPNVQNQLNSSTPSLQSPSMRTPTPHDSYLNGKLPDDCHNNNHITQLMNNQNMLTNGLNLNSLNNNIINLNHHNFLRNSEMCMDMKSPFRFDEHRYRFGDENVMVGRLGESLIPKGDPMEARLQEMLRYNMDKYSTQNLDTLHIARRVRELLSIHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDENAVLLLKSLIPKKAGKEGSLPPFGREGEGQNLTDERIAHILSEASHMMVKNSLSTPHHDDQNSHEEDSKSPMNCPSPMSAKENSLSRRLKKYENDDIPQEKVVRIYQEELAKLMGRGPGGPHPFPSLLFPNFFGGPPGTMDRSQEDMRMALDAYHRELAKLNSCPSPGLPGLLALQQQAMHQQTPSQQQNGGAQDLSLPKERKSETPGPPSTPGSTTERPGTAQSHKLVNGVVEPSENVDKDRERDLLKKESGMMDSSVAEAIRHAGSAFSLVRPKTEPDWPQPSTGSTASSPLSNSILPPVLNPSDDLVTSSAASPLQRMASITNSLISQPTVPSHHTTNQRPLKAVLPPITQQQFDMFNNLNTEEIVKRVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKSWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKISPEKLMRTGGYGGATINPSPIPPKHPMPPTSKHSDQLSNMAANILQAQQQHQMEQRDREQRERERKNMEREREIMRETILPPSLNIIPPTNNSMLGSPPSLSGLMVANDLKKGLTPGSLPPQPHQLTNMRALHQHISPSVYEMAALTQDLDTQIITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDAHNIDRLQALKNERRELNKRRRSSGHGGDNSSDTSSNDTSEFYHSASPGPGPPSAKKQRVLFNEEQKEALRLAFALDSYPNVATIEFLANELGLSPRTITNWFHNHRMRLKQQVPHPQESNPNVQRDPQQPFDPVQFRVLLNQRLLEVQKERLGLGSVPLPYPPYFANNNLATLISRGLISPECENILANVAKEQFGGLDLSMSGLKREPYDDEDMGSELGSEDSNLSSTSIRGREKEKGRRRRSGRGKNDGISRRESKFQTQTRRTPMG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00362431; iTF_01250869; iTF_01250969;
90% Identity
iTF_01250969;
80% Identity
iTF_00362431;