Ccol012621.1
Basic Information
- Insect
- Columbicola columbae
- Gene Symbol
- kn
- Assembly
- GCA_016920875.1
- Location
- JADMLL010000008.1:8875312-8890887[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4e-57 3.4e-53 180.8 0.0 10 135 29 149 20 154 0.94
Sequence Information
- Coding Sequence
- ATGTTTGGACTACACCATCACCAAGATGCAGCTGCCGCAGGACTTCATCATCACCACCATCATCATCAGCCTCGTGGTCCTGTGACGAGTCTAAAAGAAGAACCTTTGTCAACTTCTCAACTGGCCGCCGCTCGTTCCTGGATGCAACCGAGTGTTGTGGATCAGACAAGCATTGGCATAGGTCGAGCTCACTTCGAAAAGCAACCGCCGAGCAATTTGAGAAAATCCAATTTCTTCCATTTTGTTATTGCCTTGTACGACAGAGCTGGTCAACCCATCGAAATCGAAAGAACCGCCTTCATAGGATTTATCGAAAAAGATCAGGAATCAGAAGGTCAGAAAACGAACAACGGAATCCAGTACAGACTCCAGCTCCTCTATGCTAACGGGGCAAGACAAGAACAAGACATCTATGTCCGGTTAATTGACTCTGTTACGAAACAGGGCCGTGGAGTAACCGCGATTCCGATGTGCCAATTGTAA
- Protein Sequence
- MFGLHHHQDAAAAGLHHHHHHHQPRGPVTSLKEEPLSTSQLAAARSWMQPSVVDQTSIGIGRAHFEKQPPSNLRKSNFFHFVIALYDRAGQPIEIERTAFIGFIEKDQESEGQKTNNGIQYRLQLLYANGARQEQDIYVRLIDSVTKQGRGVTAIPMCQL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00813504;
- 90% Identity
- iTF_00242940;
- 80% Identity
- -