Ccol013253.1
Basic Information
- Insect
- Columbicola columbae
- Gene Symbol
- kn
- Assembly
- GCA_016920875.1
- Location
- JADMLL010000008.1:8939816-8953478[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.5e-127 2.1e-123 412.6 18.6 205 539 1 318 1 324 0.87
Sequence Information
- Coding Sequence
- ATGAGAAGATTTCAGGTAGTGATAGCGACCCAGGTTAACGTCGAAGGTCCTCTCCTAGCGGTCTCGGACAATATGTTCGTACACAACAACTCAAAACATGGAAGAAGGGCAAAGAGACTAGACCCTTCAGACGGTCTTTATCCTCCTCTTCCGGTTGCAACACCTTGCATCAAAGCGATTAGTCCGAGCGAAGGTTGGACGGCTGGAGGATCGACGGTGATCATCGTTGGGGACAACTTCTTCGATGGCCTTCAAGTAGTTTTCGGGACCATGTTAGTGTGGAGTGAGCTAATTACGTCGCACGCTATTAGAGTTCAAACACCTCCTCGCCACATACCAGGGGTTGTAGAAGTAACTTTATCTTATAAATCAAAACAGTTTTGTAAAGGAGCGCCGGGAAGATTTGTATACGTTTCACTAAGCGAACCAACGATAGATTACGGTTTTCAGAGGCTACAAAAATTAATTCCCAGACACCCAGGTGATCCAGAAAAACTGCCAAAGGAAATAATATTAAAAAGAGCTGCAGACTTGGCTGAGGCGTTGTACAGTATGCCGAGGACAAATCAACTGATGTCCGCTCCTCGATCCCCCTCAATGTCAAACAATGGAATGTCAGCAGGGTTTAACACATACACTGGACAGTTGGCTGTCAGCGTCCAGGAAAATGGCAATGAAGAGTATGGGAGAGCGCAAAGTAGCAGCGTGTCGCCCCGAGGAGGATACGGTTCTAGTGCCTCGACTCCACATTCCAGCAACGGAGGCTCGTACGGTACAGCACCGTCAACTTCTGGAGTAGGAATTAACGGTAACTACGGAGGTTCGACGCCGACGAACAACGGCACGAATATGGGATCACCTGCAGGAATAGGAAGCTTAGTTCCATCTCCTTTTGCAGCCATAAATCCTTTTGCTCTGCCAACTTGCAGTTCACAAGCTTACAGTTCGAGTCCACTGATAGCAGCAACTAAATAG
- Protein Sequence
- MRRFQVVIATQVNVEGPLLAVSDNMFVHNNSKHGRRAKRLDPSDGLYPPLPVATPCIKAISPSEGWTAGGSTVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGAPGRFVYVSLSEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRTNQLMSAPRSPSMSNNGMSAGFNTYTGQLAVSVQENGNEEYGRAQSSSVSPRGGYGSSASTPHSSNGGSYGTAPSTSGVGINGNYGGSTPTNNGTNMGSPAGIGSLVPSPFAAINPFALPTCSSQAYSSSPLIAATK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01257758;
- 90% Identity
- iTF_00362278; iTF_01250817; iTF_01308481; iTF_01307821; iTF_01250867;
- 80% Identity
- iTF_00362278;