Ccol003595.1
Basic Information
- Insect
- Columbicola columbae
- Gene Symbol
- Tfcp2
- Assembly
- GCA_016920875.1
- Location
- JADMLL010000006.1:12018004-12019287[+]
Transcription Factor Domain
- TF Family
- CP2
- Domain
- CP2 domain
- PFAM
- PF04516
- TF Group
- Beta-Scaffold Factors
- Description
- This family represents a conserved region in the CP2 transcription factor family.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.1e-16 1.8e-12 47.0 0.5 11 64 109 162 96 186 0.75
Sequence Information
- Coding Sequence
- ATGTTGCTCCCGAGAACAGAAGCAAGTGGTTCCAAAATGCCGCCGTGGCACGTTGACGTCATCGAGGATATGGCTGCTGATTTGGATGGTAGCTTGTCCAATCTAGGTGCTGATTTAGCTGCTGGTTCGTATAACATGAGCGAAGCTCTCCTCACACTACCTTCTCTGACTGTGTTTAAACAAGAAGCTCCATCTCCGTCCCAGGAGAATTTGATAAATCAACCCGGCCTACAGCCAAATATCGAAGAAGCTCAGGATCAGAATTCGACTCTTCATCATTTACTACAGCAAAATAGTTTTCATAATCATTTAAAGAGGAGTGGTGCGAGCAGTCAGAGCAAGACACCGGATTCGAATGAGAAGAAAAACGAAGATTGCAGATTTCAGTATGTATTAGCTGCAGCCACTTCAATAGCAACCAAAGTCACCGAAGAAACGTTGACCTACTTAAATCAGGGACAGTCTTACGAGATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAAGGTAATACAATCAGCTAGAAACAGATTTAGAAATAGCAGTGAACACTGA
- Protein Sequence
- MLLPRTEASGSKMPPWHVDVIEDMAADLDGSLSNLGADLAAGSYNMSEALLTLPSLTVFKQEAPSPSQENLINQPGLQPNIEEAQDQNSTLHHLLQQNSFHNHLKRSGASSQSKTPDSNEKKNEDCRFQYVLAAATSIATKVTEETLTYLNQGQSYEIXXXXXXXXXXXXXXXXKVIQSARNRFRNSSEH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -