Ccol014645.1
Basic Information
- Insect
- Columbicola columbae
- Gene Symbol
- Atf2
- Assembly
- GCA_016920875.1
- Location
- JADMLL010000010.1:2443026-2445247[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.7e-09 1.3e-06 28.2 2.5 7 65 252 310 246 310 0.93
Sequence Information
- Coding Sequence
- ATGGTTCTCAACCTTGGATTGGGGCCAAAAGGTACCACATTCACGGACCAAACACCGACTCCGACCCAGTTCATCAGAAACTGTGAGGAAGTGGGCTTGTTTCAGGATCTACAAAATGATAATCCATTTGAAGAAACTTTCAGGAAAGCGGTTGAAGCTGCGAAAGCAGGGCAAACCCTTCCCCTGGACAAGTCATATCAGTCAAACCCAACAGATGATACACTTCACACTCCAAATGTATTTCCTCACATCACAGATGTGCCAAATCGTCAGGATGATTGCATGAGACCTGATAACTTTCCATCTTGTGATGATTCTTTATTAAAACAAGATATTACTGAAAGTGGGAAAATTTGTAAAACAGACATCACAGATCATGCCAGTCAACAACACTCAGTTTTAAACCAAAAAGAAAATGAAAATGCAGTGCCACTGGGAAGCATAGTGAGCACTGAAAACAAATCCACATCAGAAAACAAAGTTATTTTAAATGTACCTGATTATCACTTTGTTCAACTCATTCCTGCAGAAAATCCTCCAAGTTCGTGCAAAGTGGTTTTTGTAAAAAATTCTAATAATGATGCCTTCCCACCTCTGCCTCTGACTGTGAAAGAAAAGCTAAAAAAAAGTTTAAAAGAGAAAAAACTGCATTCACAGTCTGAAAAAGATGATGGAGTTGTCATATCAAATGATGTTCCTAATAAAATTCACAAGAGTAGGAGTGATAAACAGAGATCTAAAGAATCGAGAAGTGAATTTTTGGCCAGGAGCAGGGCTGCTGCCTACCGGTGTCGGGAAAAGAAAAAGAAGTACGTCCTCTATTTGGAAACAGTAAACAAAGAGCTTTCGACAGCAAATGAAAACCTTCAGTTGATTAACATGGCGCTGATGAAGGAAATCGGGGATCTTCACACGGAATTGACGAAGCACAAAAATTGCAGCGCAGCCGACGAAAGTACGGAAACGGCTTTAACGAGAGCTGAGGATATAATGAACGAGGAAATATTTCTAATAGAAGAGGAAATATCGGAACCGGAAATAGCAAGCACCGAACAAACTCCAGATAGCGATCTCTCTCCGAAATCTCAGGACCCTGACGGAGACAGTCAGCCTTGCGAGAGGAATGAAGAACACGAAATCGTGAACCACAGCATCAAGTTGGAGGATCCTGATTCTTTCACGTTCGACGTCGCCGAAATCACATTAGAAGAGAAGACTGAAGACAGCGAAATTCCCTTGAGCGAGGGCAACAAACCTCCGGACATAATAGTTCGATTCAACAGCGTTGGAAATTATTTCCCAGCCATACTTCCGTTTCATTCACACCTGAACGGCTACACGGAGCGCGGGGGTGAAAATGTGAAAAGAATTTACAGAGAACACAGTTATTTTCTGAAAAGGCCAACGATCGACGTTGACAAGAGATTGGTGAACTACAAAACGTTGAAAGAGACATCGGAGGAGTGCAAAAAATTAAACGGTTTTCGAATTCACCCGAAGAAAAGTAAAACTTTCGCCGATATCTCAGAGTTGGGTACGAAAGCTTTAGTGGGGCAAAGGACTCCGCCCCCTTTGATCCTGCTAAAACCCTTTAAGAAAAGAACTGTACAAGACAAACAAATAGAGAAAACGTGA
- Protein Sequence
- MVLNLGLGPKGTTFTDQTPTPTQFIRNCEEVGLFQDLQNDNPFEETFRKAVEAAKAGQTLPLDKSYQSNPTDDTLHTPNVFPHITDVPNRQDDCMRPDNFPSCDDSLLKQDITESGKICKTDITDHASQQHSVLNQKENENAVPLGSIVSTENKSTSENKVILNVPDYHFVQLIPAENPPSSCKVVFVKNSNNDAFPPLPLTVKEKLKKSLKEKKLHSQSEKDDGVVISNDVPNKIHKSRSDKQRSKESRSEFLARSRAAAYRCREKKKKYVLYLETVNKELSTANENLQLINMALMKEIGDLHTELTKHKNCSAADESTETALTRAEDIMNEEIFLIEEEISEPEIASTEQTPDSDLSPKSQDPDGDSQPCERNEEHEIVNHSIKLEDPDSFTFDVAEITLEEKTEDSEIPLSEGNKPPDIIVRFNSVGNYFPAILPFHSHLNGYTERGGENVKRIYREHSYFLKRPTIDVDKRLVNYKTLKETSEECKKLNGFRIHPKKSKTFADISELGTKALVGQRTPPPLILLKPFKKRTVQDKQIEKT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -