Ccol003497.1
Basic Information
- Insect
- Columbicola columbae
- Gene Symbol
- Nfil3
- Assembly
- GCA_016920875.1
- Location
- JADMLL010000006.1:11566054-11623129[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.2e-14 3.9e-11 42.7 0.5 2 56 90 144 89 151 0.94 2 2 0.59 4.5e+02 0.8 0.0 45 59 383 397 377 401 0.49
Sequence Information
- Coding Sequence
- ATGGTCGCAGAATTTGCTGTTCGAGAAGTATGTTCGCCGGTGAACGGCGAAACAACCTGCATCACAATGCCTGGAAGCGAAGGTCACAGCAACAGTAGCATGGATAGTCATTATTCGAGGGAGGAATTTGCCCACAACGACCACAGAGTCTCGCCCTCAAACAATTCAGAAACGTACACGCCGCAATGCGACATCTCGAACGGGATCAAACGAAAGGATTTCTTCTCGCAGAGGAAGCAGAGGGAATTTATTCCGGATAACAAGAAGGATGATAGCTATTGGGATCGACGACGTCGAAACAATGAAGCAGCCAAACGATCTCGGGAGAAGCGTCGTTTCAATGACATGATCCTCGAAACTCGAGTCGTGGAACTTTCTAAAGAGAATCACCTGTTAAAAGCGCAACTGGCCGCCATTAAAGAGAAATTTGGTATTAGCGGAGACAATATAATTAGTGTTGAGCAGGTGATGGCCGCTTTTCCCAGCAACGAACAGGTTATCAGCCAAACAAAACGAGTCAAATTGGTCGGATCATCGCCGATCTATCCTCCGTCTCCTAGTTCAAATCCATCTCCCTTAATTCGAGCTCCGCCTTCCAATCATCCGATTCATCTCTTCCCCATCCAACAGCCTCCAGTCGTCAACGAGCCCAACTATCCTCCAGCGGAACCCGAATCCTTTCCACAGCCTTATTCCTATCCGCTACCATCGCTTCTTCAACCCCAGCTCGACGTCGCCAACAACAGTGTATTAAACCTGAGCTGCGACAGGTCCTCTCACAACCAACTGTCTCCTCCACCGTGTCCCTGCGACAACGGATGCGAGAGTGGCGACGAGAATTCCCAACCTTTGCCGCTGACCTTGACGAGCCCGGCTCCAGGTCCTAGCAATAGTCTTCCTCATAAGCTCAGACACAAATCCCGTCTCGGAGACAAAGACGTCGCTTCTGCTCTGCTTTCCCTTCAGACGATAAAACAAGAACCGGGACCTTTGTCCAGTCCACCTTGGGACGGAGAGGGAAGCAGCGACGAACGCGATTCTGGCATTTCTCTGGGAGCCGAATGGGCCGGTCATCAGGAACCGCCTCCGACATCTCCAGATCGCGAACCAGAAGGCGAGCCCTCTGGAAATGGAGACGACCGAATGAAGACAGAGCTGGCACGTCTCGCCTCTGAAGTGGCCAATCTCAAGAGTTTCTTATCCATAAAGAAACCTCTTCAGGGATCTACGCTCTCGTCGATGATTAAAGAACGTACTGTGATGTGTGAGCACAAAGTGATTTAA
- Protein Sequence
- MVAEFAVREVCSPVNGETTCITMPGSEGHSNSSMDSHYSREEFAHNDHRVSPSNNSETYTPQCDISNGIKRKDFFSQRKQREFIPDNKKDDSYWDRRRRNNEAAKRSREKRRFNDMILETRVVELSKENHLLKAQLAAIKEKFGISGDNIISVEQVMAAFPSNEQVISQTKRVKLVGSSPIYPPSPSSNPSPLIRAPPSNHPIHLFPIQQPPVVNEPNYPPAEPESFPQPYSYPLPSLLQPQLDVANNSVLNLSCDRSSHNQLSPPPCPCDNGCESGDENSQPLPLTLTSPAPGPSNSLPHKLRHKSRLGDKDVASALLSLQTIKQEPGPLSSPPWDGEGSSDERDSGISLGAEWAGHQEPPPTSPDREPEGEPSGNGDDRMKTELARLASEVANLKSFLSIKKPLQGSTLSSMIKERTVMCEHKVI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01164679;
- 90% Identity
- iTF_01250831;
- 80% Identity
- -