Ccol004999.1
Basic Information
- Insect
- Columbicola columbae
- Gene Symbol
- Atf3
- Assembly
- GCA_016920875.1
- Location
- JADMLL010000011.1:1411925-1419113[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.7 1.3e+03 -0.7 2.8 21 48 104 134 103 136 0.82 2 2 2.3e-15 1.7e-12 47.0 15.2 2 63 135 196 134 198 0.96
Sequence Information
- Coding Sequence
- ATGGAAGATCATAAACTACTCAAAATGTACAATTTAAACGTAAACGTCGCGACGAATCTTCCGGTGGGCTTCCTCGGATTGGACGGCCAGTGCAACACTCCAAGGACACCAGAAATCGTGAACAGCTTGGTGGCCATGACAAATCCATTCGATGCTTTAATGAAGACGGGGAGAGAGAACAACAGCCCGGGAAGCGAAGAAAGTTGTTCTGGGACTGCATCGCCATTAGGTAGTCCCACCAATTCTCCTCCGAGCGTTCAACACACTCGTTCTCAGTTAATCAAAGAAGGCCTCAAGCTCACTATTCAGACGAAAAGGAAGCAGTCTGGATCGGAAACGAAAGAAGACGTGGAGGAATTTGAGTCGAAGAGGGCGAAAAGAGAAGAGCTGACGGAAGAAGACGAAGAGAGACGAAAACGAAGACGAGAGAGAAACAAAATAGCGGCAACGAAATGTAGAATGAAGAAACGAGAGAAAACGGCGAACTTAGTCCACGAATCGGAGCTTTTAGAAACACAGAACGTCGACCTCAAAGCACAGATCCAGGATCTGCAGAAGGAGAGGCGGAAACTGATGGACATGCTCTCGATGCACGCGACAACCTGCGTCAAACACGCATCCGGAAACATTCAAAATCACACGTTCGAAGACTTAGTCGAAGGAAGCGAGTCCTTCGTGACCGGCTACGATGGTCAATCCGGTTTTGGTTCGGACGCGGCGGCGGTGGCAGCGGGAGAATTCGAAATCGGTAGCACAAACGGACAAACCGCCATGAATCCATACGGGAAAGATCCAAATTTCGCCAAAATCCTAGACGACACGGCCGGGACGTCAACAAACTATTCCAGAACCTTCGACAGAACCTTTAACGGTTTTAATAATTCCGGTGCCAGTTCGAACTATTACCAAACAAAAAGCAGAAGCAACGCCGCTACCGCCGTTATGAACGGCGATGGCAAGGTGAGTGAAAATCGGTCTTGCTTCGATTATCAAAGTGACAAGAAAAGTGTTAAAGAGAAACAATCCTCGGGTCGTGTCCAACAAAGAAAAATATTCGCGTATGAGGAAAAAGATGGCGCAGACGGTTTCCGGTCAAATTTCCACTGTTCGCAAGATAGCGACGATGCGGACAGCTACAAACCGAACGGGATCATCGACGGGAATTTCTTCGCCAACAGAGCGGACATTTTCGGCGCCGGAAACGATTATGTCAATTCCTTCGGGAACAATGCCCTGGATAATGGATGCATGGCATGA
- Protein Sequence
- MEDHKLLKMYNLNVNVATNLPVGFLGLDGQCNTPRTPEIVNSLVAMTNPFDALMKTGRENNSPGSEESCSGTASPLGSPTNSPPSVQHTRSQLIKEGLKLTIQTKRKQSGSETKEDVEEFESKRAKREELTEEDEERRKRRRERNKIAATKCRMKKREKTANLVHESELLETQNVDLKAQIQDLQKERRKLMDMLSMHATTCVKHASGNIQNHTFEDLVEGSESFVTGYDGQSGFGSDAAAVAAGEFEIGSTNGQTAMNPYGKDPNFAKILDDTAGTSTNYSRTFDRTFNGFNNSGASSNYYQTKSRSNAATAVMNGDGKVSENRSCFDYQSDKKSVKEKQSSGRVQQRKIFAYEEKDGADGFRSNFHCSQDSDDADSYKPNGIIDGNFFANRADIFGAGNDYVNSFGNNALDNGCMA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -