Ccol013135.1
Basic Information
- Insect
- Columbicola columbae
- Gene Symbol
- cnc
- Assembly
- GCA_016920875.1
- Location
- JADMLL010000008.1:9803522-9815588[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.1e-15 2.4e-12 46.6 7.4 3 65 453 515 451 515 0.95
Sequence Information
- Coding Sequence
- ATGACTCGTGCATCCGCATCCAGCGTAGACATTCTCACAATCGGTCGGATGCCGTTTGTCCGAACCATGAGCATGGAGCAACGCTGGCAAGATTTAGCCAATCTCCTGAGTTTACCCGGACAGGAAGGAGTAGGCATGCATCATCCATTTGCTCATCATCCTCACCACCATCATCACGCCAATTATACTGGCCATAATTATTCTCACGATGGTCGAGGAGTCCTTCTTCACAATGCCACATTGGCACCTCCAATGGGAGACCTCAACAGTTCCGGTCCCTATAACAGTGGTTCAATGGGGAGTTCCAATCTTGGATCTGCTGTTGCAACTTCAATGAACTTGACCAACAGCAGTGAGCCCATTTCGGATGGTAGCTCCGTATTTAAAATGGAAACTCCTCACGATTTGATGTACTATCAGAATTCAACTTCTGAAATGAATCAAACTACGGAAGGATTTTTATCCTCCATTTTGAACGACGAAGACTTGCAGTTGATGGACATGGCCATGACAGAAGGCATGTACCCGATGAGAATGTTAGAAAGTAATAGTTCCAACAATGGCACGACTGGAGGACCCGTGGGTCACACCGAAGAGAGGTTGGACGCGTCGAGCGACAGCGCAGTGAGTTCAATGGGATCGGAACGTGTTCCATCTCTGTCGGACGGCGAATGGATGGAAACCGGGTCGGATTCTGGTCACAATACGGGAGACCATTACGGAAACGTCGACTACCATGGAAGCAAATTCAGACCTTTCGACTACAGTTACACAGGTCGACAACTTCTTGCCAACTCAGGACAGTCCGGAGCTGATGGTCATATACCTCCTGTCGCCCAGAAGAAACATCACATGTTTGGCAAAAGATATTTTCAGGAACAAGGAAGCAGCACTGGTTCCTCTTTGGCAGGACATAGAGCAGTCAATTTATTGCCTTCAGCACCAAATCCTGCTCCTGTTAAATACGAATACAGTGAATCCGGTGCCGAAGCTGTTGTGCCTCCTGGTTTTAGTAATACAATGGAAGCCCCTTGTGGGACTAAAATGTCAGAAGTCAAATATAGTTGTAGTCTTGATTTTATCCGCCATCAAACAGGTGCAAGATCTTTAGAACACATTCATCATAATCACACGTATCCCCTTCATTCGGAGGGAAGCATTTCTATGGTGAGACCTTCTCATCGGGACAAAGCAGCCAGAGGTCGCAAATCCGAGGAGGATCACCTGACTAGGGATGAGAAGCGTGCCAACGCGATGAACATCCCAATGCCGGTAGACGAAATCGTCAATTTGCCAATGGATGAGTTCAATGAACGTTTGTCGAAATACGATCTCAGCGAAGCTCAACTTTCCCTAATTAGAGACATTCGAAGAAGAGGAAAGAATAAGGTGGCAGCGCAAAATTGTAGGAAACGAAAACTGGATCAGATCATATCTTTGGCTGACGAAGTTAAACAAATGAGGGATCGAAAGCATCGTTTACTCAGGGAAAGGGACTACATGGTAGCCGAACGCTTACGAGTAAAAGAGAAGTTTAGTCAACTTTATAGACACGTGTTTCAGGCTTTAAGAGATCCCGAAGGTAACCAGTATTCTCCCTACGAGTACAGCCTTCAACAGTCAGCCGATGGAACAGTCGTCCTCGTACCAAGATCAACATCGAACACTCTCCTCGATCAGGACACGCCTAGAGTTAAACACAAAGATCAGAGCCACGATCAGCAGAAGGAATGA
- Protein Sequence
- MTRASASSVDILTIGRMPFVRTMSMEQRWQDLANLLSLPGQEGVGMHHPFAHHPHHHHHANYTGHNYSHDGRGVLLHNATLAPPMGDLNSSGPYNSGSMGSSNLGSAVATSMNLTNSSEPISDGSSVFKMETPHDLMYYQNSTSEMNQTTEGFLSSILNDEDLQLMDMAMTEGMYPMRMLESNSSNNGTTGGPVGHTEERLDASSDSAVSSMGSERVPSLSDGEWMETGSDSGHNTGDHYGNVDYHGSKFRPFDYSYTGRQLLANSGQSGADGHIPPVAQKKHHMFGKRYFQEQGSSTGSSLAGHRAVNLLPSAPNPAPVKYEYSESGAEAVVPPGFSNTMEAPCGTKMSEVKYSCSLDFIRHQTGARSLEHIHHNHTYPLHSEGSISMVRPSHRDKAARGRKSEEDHLTRDEKRANAMNIPMPVDEIVNLPMDEFNERLSKYDLSEAQLSLIRDIRRRGKNKVAAQNCRKRKLDQIISLADEVKQMRDRKHRLLRERDYMVAERLRVKEKFSQLYRHVFQALRDPEGNQYSPYEYSLQQSADGTVVLVPRSTSNTLLDQDTPRVKHKDQSHDQQKE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01250832;
- 90% Identity
- -
- 80% Identity
- -