Cpec004015.1
Basic Information
- Insect
- Colostygia pectinataria
- Gene Symbol
- GATA-B
- Assembly
- GCA_951394395.1
- Location
- OX596351.1:14317580-14331069[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 9e-18 2.2e-14 53.2 3.9 1 34 190 222 190 224 0.97 2 2 4.2e-18 9.9e-15 54.2 6.3 1 34 258 290 258 292 0.97
Sequence Information
- Coding Sequence
- ATGGTTGTGCAAATAGCGGGTCCCGGAGCCCGGAGCCCGGAGCCCGGAGCCCGGGCTGGCGCAGGGTCTAGCTTGTTTATGCACGagAAACCGAATGAAACCTATAATGTACCGTGTTATTTGGTTGTATTCAGAGGCGGAGGCGGGGGCGGAGGCGGGGGCGGAGGCGCGGTGTACTCGCGCTGCGCGTACGTGACAGGCGGGGGCGGCTCCTCGCCCTACTTCTCCTCCGAGCTGGGCGCGCAGCCCCAGATGTGGAGCCCCAGTGCAGGTGGCTCCCCGAACTACGTCGGATCGAGCGGAGGCGGCAGCGCGCTCGGTGAGGAGTACGCGGACGCGGGCGCGGAGGCGGGCGCGGGCTCCTCGCTGCCCTCCTTCAGCACGCGCTTCGGGGGCGCCTTCGCgtgcgcccccgcccccgcccccgcagCCTACCCCGCGCCCGCACCACCCTCCTACTCGCACCAGAACGTGTGGAGCTTGGACGGCAACAGGCCGCGGCACATGACAGCCGCCGAAAGTCTATCTGCGTTCGAGATGGCGGAGTTTTTCACGGAGGGACGCGAGTGCGTGAACTGCGGAGCCATCCACACGCCGCTGTGGCGCCGCGACGGCACCGGCCACTACCTGTGCAACGCGTGCGGGCTCTACAACAAGATGAACGGCATGAACCGGCCGCTCAAGCAGCCGCGGCGGCTGGTACGTCAGCGCAGCGCATCGCACGCGTCGCTCGCGCCGCACGACATGGGCACCAAGCGGCCCGGCGTGGTGTGCACcaactgccacaccaccaccaCCTCGCTGTGGCGCCGCAACGTGAAGGGCGAGACCGTCTGCAACGCGTGCGGCCTCTACTTCAAGCTGCACAACATCAACCGCCCGCTCGCCATGAAGAAGGACTCCATCCAGACCCGGAAGCGGAAACCTAAAAATAGCAGCATAAAAGCGGATCGAAGTCTTAAAAACACAATTTCACGCGCCGTGTCTTCGGGCAACGTCAAAATGGAGAACTTACTGGAGAGCGGTGCCGGGGGAGGGGCTGGCGTAGGGGGAGTGGGAGTGGGAGGGGGTGCGCGCGCGGGGGTGCCGCTCGGCTACTACATGCAGCACGCGCTGAAGCTGGAGCAGCCGCCGCCCGCGCAtgcgcacgcgccggcgccgggccCGGCTGCGCTCTACGAGGAGCTGGAGTACCGCCGCGAGCCCGCCGCAGTCTCGTGA
- Protein Sequence
- MVVQIAGPGARSPEPGARAGAGSSLFMHEKPNETYNVPCYLVVFRGGGGGGGGGGGAVYSRCAYVTGGGGSSPYFSSELGAQPQMWSPSAGGSPNYVGSSGGGSALGEEYADAGAEAGAGSSLPSFSTRFGGAFACAPAPAPAAYPAPAPPSYSHQNVWSLDGNRPRHMTAAESLSAFEMAEFFTEGRECVNCGAIHTPLWRRDGTGHYLCNACGLYNKMNGMNRPLKQPRRLVRQRSASHASLAPHDMGTKRPGVVCTNCHTTTTSLWRRNVKGETVCNACGLYFKLHNINRPLAMKKDSIQTRKRKPKNSSIKADRSLKNTISRAVSSGNVKMENLLESGAGGGAGVGGVGVGGGARAGVPLGYYMQHALKLEQPPPAHAHAPAPGPAALYEELEYRREPAAVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -