Cpec020885.1
Basic Information
- Insect
- Colostygia pectinataria
- Gene Symbol
- ZNF131
- Assembly
- GCA_951394395.1
- Location
- OX596377.1:3924816-3930971[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.57 33 5.6 1.8 1 23 232 255 232 255 0.97 2 11 0.15 8.5 7.5 0.2 1 19 262 280 262 282 0.86 3 11 5.3 3.1e+02 2.6 0.2 1 19 288 306 288 311 0.87 4 11 0.55 31 5.7 2.8 1 23 316 339 316 339 0.94 5 11 1.6e-06 9.4e-05 23.1 0.8 2 23 344 366 343 366 0.96 6 11 4.5 2.6e+02 2.8 0.3 3 23 374 391 373 391 0.67 7 11 0.0074 0.42 11.6 0.7 3 21 400 418 399 423 0.93 8 11 0.0041 0.23 12.4 0.4 1 23 432 455 432 455 0.93 9 11 0.076 4.4 8.4 7.0 1 23 461 484 461 484 0.96 10 11 6e-06 0.00035 21.3 1.1 3 23 495 515 494 515 0.98 11 11 2.1e-05 0.0012 19.5 0.2 1 23 521 544 521 544 0.96
Sequence Information
- Coding Sequence
- ATGATGTATCAGGTGGCTGTGGCTGTGGAGTCGGTATGCTGGGAGTGTTCAGCGATGTTCCACAAGATGCACCATTTCAGGATGCAAGTACTTAATGCTCAGAAATGCTTGGAAAGTGCCAGTGATAAGATCACAGATCTAATGCCGCTGACACACCTAACACGCTCAAGATTAAATTTAAACGACATCTGTTgtaatcaaaactttgaaagcTTAGATACCGCACAACATAGAAACAACCCGATCAAGAATGATCTTTTTGCACAAAAAATCAAAACTGAATTGTATTTTGAAGAGGACGAGACAAGCGCAAAGAGTTTTATAACTATAGATGATGTGAAATGTGATGAAACTAAAGTATCGAATATTGTTGTCGATGTAACTAGAATTAAAAACGAAAATGATGAAATGTTAAGTGATAACGAAGCCCTAGAAGAAATAAGTGTGTCTGCTATAGATATAACACCAAAAGCTGACAGAAAAAGGAAAATTAAAAGCGATGTCCCAaagaatgaaattaaaaaagcgAGACATGAAAAAAAAGACAAGAATTCAAAGCGGAAAGCTAAAGagaatgttaataaattatctgtcactaaagataattatattgtaattgAAATGTCTGAGGAGGAAATGATGGCGAAAcgagagacagacagacaggcgGATAGATTTAAGaataaagttaaatataaaTGTGAGTTGTGTATTAGTGGGTTTTTTCATCAGGAACTTTATGATAAACATATCAGAATCAGACATTCAGAGaaaGCTGGCGAACACCGATGCAGTGTATGCCAGACACGTTTCGCAAATGCGAGTATATACAGGGAACATGTCGAGTGCCACTACAGGAAGTACCGTTGTAGAATATGCTCGTATATCGGCTACAGTCTCTCGGATATGGTGTCGCACGACGCGAAGGAACACGGCCTTAAGCGGTTCTCTTGTAAACTGTGCCATGAGGAGTTCCCGCTTCGATCGAGACTGCGCTTCCACCGCGAGACTATGCACGAAGCGCCGGTCAAGTGCGAGTCCTGCGGGAAAATGTTTAGGACTAAGGACAGCCTTCGAGTACATATAAAACAGATGCACAGCTACAACCCAAAAGCGGCGTGTCCGGTGTGCGGCGCACGCGTGCGCAACATGAAGAGCCACTCGCGCACGCACGAGGCGGCGCCCGAGGCCGCGTACTGCGCCGAGTGCGACCAGAGGTTCACCAGCACCGCCTCCTACAGGTCGCATCTCAAGTACTCGCTGCGACACCGCGCACCCGACACTCTACTCAGCCACGTGTGCGGTACGTGCGAGGCGCGGTTCGCGACCGCTGCCGGGCTTAAAAAGCACACGGTGCGCCGTCATTCCTCTGTGCGCCCTCACAAATGCGAGCGCTGCGGAAAGGGATTTGAAGAACATTGCAAGCTCAAACTGCACATAATGCACGCACACGAGGGTGTCGAGAAGCCTAAGGACAAGATATGCCACATATGCGGACGTGGCTTCTCTACCAAACTGACGCTCAGCAACCACATCCGCGTCCACACGGGAGAGAAGCCGTTCCGCTGTGAGATATGCGCCGCCGCGTTCAGCCAGAAGAGCTCATTGACCACGCACACGCGTGGCGTTCACCTCAAGATCAAACCCAGGCCCGGACGGGGGCATAGCTCCGGAGCATGA
- Protein Sequence
- MMYQVAVAVESVCWECSAMFHKMHHFRMQVLNAQKCLESASDKITDLMPLTHLTRSRLNLNDICCNQNFESLDTAQHRNNPIKNDLFAQKIKTELYFEEDETSAKSFITIDDVKCDETKVSNIVVDVTRIKNENDEMLSDNEALEEISVSAIDITPKADRKRKIKSDVPKNEIKKARHEKKDKNSKRKAKENVNKLSVTKDNYIVIEMSEEEMMAKRETDRQADRFKNKVKYKCELCISGFFHQELYDKHIRIRHSEKAGEHRCSVCQTRFANASIYREHVECHYRKYRCRICSYIGYSLSDMVSHDAKEHGLKRFSCKLCHEEFPLRSRLRFHRETMHEAPVKCESCGKMFRTKDSLRVHIKQMHSYNPKAACPVCGARVRNMKSHSRTHEAAPEAAYCAECDQRFTSTASYRSHLKYSLRHRAPDTLLSHVCGTCEARFATAAGLKKHTVRRHSSVRPHKCERCGKGFEEHCKLKLHIMHAHEGVEKPKDKICHICGRGFSTKLTLSNHIRVHTGEKPFRCEICAAAFSQKSSLTTHTRGVHLKIKPRPGRGHSSGA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -