Basic Information

Insect: Colostygia pectinataria
Gene Symbol: ZNF296_2
Assembly: GCA_951394395.1
Location: OX596376.1:417337-441612[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.28 16 6.6 0.0 3 23 186 206 184 206 0.96

2 14 0.001 0.06 14.2 1.6 1 23 285 307 285 307 0.99

3 14 1.8e-05 0.001 19.8 0.6 1 23 313 336 313 336 0.96

4 14 0.054 3.1 8.8 6.0 1 23 341 364 341 364 0.93

5 14 9.4e-07 5.4e-05 23.8 2.2 3 23 555 575 554 575 0.97

6 14 0.0002 0.012 16.5 0.7 1 23 581 603 581 603 0.97

7 14 0.093 5.3 8.1 4.7 3 23 670 690 669 690 0.97

8 14 0.0015 0.087 13.7 1.1 1 23 725 747 725 747 0.98

9 14 1e-05 0.00058 20.6 0.3 1 23 755 777 755 777 0.97

10 14 0.02 1.2 10.2 2.6 1 23 786 808 786 808 0.98

11 14 0.00013 0.0072 17.1 0.9 3 23 868 888 867 888 0.98

12 14 0.013 0.74 10.8 5.6 1 23 905 927 905 927 0.97

13 14 2.1e-06 0.00012 22.7 0.7 1 23 933 955 933 955 0.98

14 14 7.2e-07 4.2e-05 24.2 3.1 1 23 961 984 961 984 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.28	16	6.6	0.0	3	23	186	206	184	206	0.96
2	14	0.001	0.06	14.2	1.6	1	23	285	307	285	307	0.99
3	14	1.8e-05	0.001	19.8	0.6	1	23	313	336	313	336	0.96
4	14	0.054	3.1	8.8	6.0	1	23	341	364	341	364	0.93
5	14	9.4e-07	5.4e-05	23.8	2.2	3	23	555	575	554	575	0.97
6	14	0.0002	0.012	16.5	0.7	1	23	581	603	581	603	0.97
7	14	0.093	5.3	8.1	4.7	3	23	670	690	669	690	0.97
8	14	0.0015	0.087	13.7	1.1	1	23	725	747	725	747	0.98
9	14	1e-05	0.00058	20.6	0.3	1	23	755	777	755	777	0.97
10	14	0.02	1.2	10.2	2.6	1	23	786	808	786	808	0.98
11	14	0.00013	0.0072	17.1	0.9	3	23	868	888	867	888	0.98
12	14	0.013	0.74	10.8	5.6	1	23	905	927	905	927	0.97
13	14	2.1e-06	0.00012	22.7	0.7	1	23	933	955	933	955	0.98
14	14	7.2e-07	4.2e-05	24.2	3.1	1	23	961	984	961	984	0.98

Sequence Information

Coding Sequence: ATGGATATAGACCCGCTAAGCTCTTACgggcaatacaatacataccaACCCTTTCATCCCCCAACCAGTATTCCATCAACACAACCCAGTGTCTCCCACACACAACCCAATAACCCCCATATACAACCCAACATCCCCCATGCACAACCCAACATCCCTCATACACAACCCAGTGTCTCCCATATACAACCCACCATCCCACATACACAACCAAACATTCCCCATACACAAACCAACATCCCCCATACACAACCCAATGACCCCCATACACAACCTATACCCTACCCATACAATAAGGATTACTACCCACATTTACTGTTCAACCAAATAAATGACCAACCATCAAGTCAAACAGACAGTCAAAAGCTTGTAGGACATACCGTAGCGGCAGAGCCAGACACAACTATGCCTGTGCAGACAAACAATAATACCGAAGATGAAGATATTAAACCTGATATAACTAAGATTAGGCTTAAACGTGTCAGGAAGCTCAAAGGTAAAACCAGCAGCTACTGGAACAAGAAAATAAACGATAAAGATTTCAAGTTCTACGGCTGTTCCGTATGCAACATATCATTCCAAGAGCTGACAGAACTTGATGCACATGTCACGATACACAGCAACCGTATCACCAGCTACGATATCAGGATACAGAATCAGAAGAAGCGGAAACGACTTAAGAAAGAGAAGAAGAGAAAGAAGAAAGATGCGAAGGTTAAGACGGAGCTGGATGTGGAAATTAAACCGGAGGACGGGTATATCGGGACGGAGAAGGTCGGGGAGTTGAACCAGGTTAACGATGTCAAAGAGAAAAGCAAAGGAAAGAAGAAGGAAAATGGGAAAAATGAGGTGTACAAATGCTTTGCGTGTAACAAGCAATTTGCGCTGAGTTACTATTTGAAGATACATGTTCGATCTCATACAGATGAGAAGCCGTATGTCTGTAACTACTGCGGCCAGACTTTCATAACAGCGAGTAAACTCGGGCGACACAACAAGCGAATACATCTCGCTATACGCCACCAGTGTAGAATATGCTTTAAGTTCTTCAACAGATTTGAACTGCTTACTAAACATTTTGACAAGAAGCATTTAGATCAAAAGTTAGATGGAGAGCCTTATGactACAATGCGATTCTGCCATACCTAACCGAATTAGAAGACCAATTTAAACTGGAATTGGAGGCAAAGAAACCCAAGACTGAGGACCCCTGGGAGTGGCCTCACGGGGCCCCAAAAGAACCCCTCGAAACCCCACTAAGGCCCCATGAAGCCCCAAGGCTTTCGGAGGCCCAAAGAGATGACCCCAATGTGCCAAAGCTCGAAGACACTAAAGtggaaaaagttgaaaaatctGAAATCCTACAAGCGAAGTTTGAGTTCGCCGAGGACATCAAGGAGAAGATCGAGGAGGTGGAAGTCAAGTGTGAGATGGTGGAGCTGGAACCGGAAGTACCTGAGGCACTTCCGGACGCGGAGGTGTTCAATGAGAGCTTCGAGCCCCAGGACGAGTCCTCGGACGAGTCTGTGAAGGAGGAAAGACTACCATCATCGGACGATGAGGAATATTTCCCCCCGGACGGGTGGGCGCGCTGCCCCCCCCCGGAGTCGCCCCCCTTGCCCCCCTCCCCCCCCGCCAAGCGGAAAGGGGGGGTGGGCTCTTGCGAGAGATGTAACAGGAGCTTCAGTAGTAACTCCTATTTGAAAATACATATGCGAACACATACAGGTGAGAAGCCGTACGCGTGCTACGTGTGCGGTCGCGGGTTCATAACCGCGAGCAAGATGCATCGACACGTGTTAACACACAACGAGACGTGGCTCGGTGAAGATGGAATTAAACCAGAGGGCGCTGAAATCAAGTCTGAAGCGGAGGATGACGCTGGCACTGAGAAGAAGATTAAAAAGTCGAAATCTAAGATAGAAAAAGCTAAAACTAGACTTCTGAAGAAGCCGAAGAAGAAAATGGACCCTAGCGTGAAGTTAGGACGCGGGCGGCCTAACTGCTGTGAATACTGCGGGAAAAAattccTCCATGTTGAAACTTTGCAAGTCCACAAGAAGTCTCATGAAGGAGAGGAATTGATTTACAAATGCAATTTCTGCTTGGAGCCGCAACTTGATCAAGAGTCGAAGCGGGAGCACGAGGCGACGCACACGGGGGCGAAGCCCTACTACTGCACCCTCTGCGGCAGGAACTACAAGGACCGAGGCGCTATGATATACCACAGGAAGAATCACAAGCCGAGCGATGAGAAGCTGTTCATCTGCGACATCTGCTCCAAGAGATTCAACTCGCAGGCGAAGCTGGCGAGGCATATCGTCACGCACTCCACTGAGAAGTTCGTGCTGCGCTACGAGTGCCCCGTGTGCGCCAACATGTTCCACACGCGGTGGCACATGCAGATGCACCTCAAGTCTCACCAGAAAGAAGGCCTAATACTAGAAGAGAACCGGAACGCAGTTCTAGCGATGGTCCTACAGAACGCGCGCAAGATACCCAAGTGTGACCCCCACGGCCCCACGctccccgcgccccccgcgacCCCCGCGACCCCCGCGACCCCCGCGCTGCACCCCCCAGACGAGCGATCCAGGATATGCAATATCTGTGGACAGGTGTTCCAACATTTCTACTACCTAGAGGAGCATCTCAAAACGCACGGGAACAAGATAGCTGTCGAAGATCTGGACAAAGAGGAAGAGAAGAAATACACCTGTCAGGTCTGTTCGAAATCCTTCAAACTGCACTATTATCTGAAGCTACACAGCTTCACGCACACGAAGGAGAAGCCGTTCATCTGCCAGCAGTGTGGCAAGGGCTTTATAACTAAGGGCAAACTCAAACGGCACCTAGAAACGCATCAGGGCCTCAAGAAATACCAATGTCATATTTGCTATAAATTCTTTACACGACCAAGTTATTTGAGAATACATGTAAGGACTATACACGGTACCCAGGATTATAATTTCAGGGATTATGGGGTGGGGGTGCCTTTGGGGTTGGGGGGGGTGCCCCTAAgtcatataaataatatgtga
Protein Sequence: MDIDPLSSYGQYNTYQPFHPPTSIPSTQPSVSHTQPNNPHIQPNIPHAQPNIPHTQPSVSHIQPTIPHTQPNIPHTQTNIPHTQPNDPHTQPIPYPYNKDYYPHLLFNQINDQPSSQTDSQKLVGHTVAAEPDTTMPVQTNNNTEDEDIKPDITKIRLKRVRKLKGKTSSYWNKKINDKDFKFYGCSVCNISFQELTELDAHVTIHSNRITSYDIRIQNQKKRKRLKKEKKRKKKDAKVKTELDVEIKPEDGYIGTEKVGELNQVNDVKEKSKGKKKENGKNEVYKCFACNKQFALSYYLKIHVRSHTDEKPYVCNYCGQTFITASKLGRHNKRIHLAIRHQCRICFKFFNRFELLTKHFDKKHLDQKLDGEPYDYNAILPYLTELEDQFKLELEAKKPKTEDPWEWPHGAPKEPLETPLRPHEAPRLSEAQRDDPNVPKLEDTKVEKVEKSEILQAKFEFAEDIKEKIEEVEVKCEMVELEPEVPEALPDAEVFNESFEPQDESSDESVKEERLPSSDDEEYFPPDGWARCPPPESPPLPPSPPAKRKGGVGSCERCNRSFSSNSYLKIHMRTHTGEKPYACYVCGRGFITASKMHRHVLTHNETWLGEDGIKPEGAEIKSEAEDDAGTEKKIKKSKSKIEKAKTRLLKKPKKKMDPSVKLGRGRPNCCEYCGKKFLHVETLQVHKKSHEGEELIYKCNFCLEPQLDQESKREHEATHTGAKPYYCTLCGRNYKDRGAMIYHRKNHKPSDEKLFICDICSKRFNSQAKLARHIVTHSTEKFVLRYECPVCANMFHTRWHMQMHLKSHQKEGLILEENRNAVLAMVLQNARKIPKCDPHGPTLPAPPATPATPATPALHPPDERSRICNICGQVFQHFYYLEEHLKTHGNKIAVEDLDKEEEKKYTCQVCSKSFKLHYYLKLHSFTHTKEKPFICQQCGKGFITKGKLKRHLETHQGLKKYQCHICYKFFTRPSYLRIHVRTIHGTQDYNFRDYGVGVPLGLGGVPLSHINNM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -