Cpec019998.1
Basic Information
- Insect
- Colostygia pectinataria
- Gene Symbol
- arid5b
- Assembly
- GCA_951394395.1
- Location
- OX596376.1:655793-668108[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.2e-13 2.8e-10 40.8 0.1 2 89 217 291 216 291 0.92
Sequence Information
- Coding Sequence
- atgCACGAGGTCCTGGCCATCAATGATAAGGTGGTCCTGAAAGCCGAGGACCTGCTGAGCTGGATCTGCACCGGTGACTCCTGGACGTGGGGCATGCGCGCGGTCTGGCGCGGCGCCTGCGCCCCCCCAGCCGAGGACAAGGAGACAGCACCACTGCACCACACCAAGCTGGACTTCAGTGATATTGACAAGGAGAAAAGTGCTATTGTGGTGGAGCCCGAGGAAGCAGGAGTGGTGGTGTTCTCATATCCTCGGTACTGCCGGTACCGCGCTGTGGCTGCCAGGCTGCAGGGCCTGCAGGCGGACTGGCTGAGGGACTCGCTGGTCGCAGCTCTGGGGGGGTACGCCGCACCCACTACCAACACGCGCATACTCTACTGCAAGGAGACGTTCGAGTACCCCGAGCTGGAGGGTCATGAGTACGTGTGCAGCCACCTCGCCCCGCGGCTGAAGGGGCGGCCGCgggggcgccggcgccgcgcgcgCTCGCGCACCCACTCGCCATCCTCGCCCGACAGTGACGACAGACCTGATGACTATACTGCTGTGACTCCGCCCTCCGGTCCTCGGCGGCTCTCGCTCCGGAACGGACCGGAGAAGATCTCCGGTCCCTCCCTTCCGGAAGAGGAGGGAAAGTACCTCCCGGAGGAGAGGGACTTCCTGCGTAGACTCAAGCACTTCTATAAAGGACGCAACGAGTCGCTGGACAAAGCTATCACGTTGAAGCATATAACCCTGAGCTCGGTGTACGCGATAGTGACGTCACGCGGCGGGTACGACGCCGTGTGCCGCCACAAGCTGTGGCGCGTGCTCTTCACGGAGCAGCCGGTCTACACGCGCAGGCATTACGAGAGataCCTCCTGGCATTCGAGCACCATGAGCGCCGCAACGGGAGCAGGATCAACGGACTCACGCAACTCATAGACACCATACACGTAGCCGACTCACCATTGAGAGACGAGAAGCCACACTCGCCCTTCAAGCATAACATCGACTGCGAGACAGGTGAGATAAAAGACGAGCACATGATATCCTCGAAGCCGGCTTCGGAGCTGAACCTGGAGTTCCTCGCGTCGCTTCCGGAACACCCCAAGCTGCTCGTGAGGTCCGCGGACGAGCTGATGGCGCCCAGGGACAGGATGCACTGGATCACACCCAacaaagCGGCGCACGAGTTCGGTAGCTCCGCGCCCCCTCCCCCCTCCGCGCCCCCCCTCGCCCCCGCCAGCGCCCCCGCGCCCCTCGCGCTCCTCAACGGACACGGACACACACACCCCTCTATGGAACAGGTGCACCGCCCCTTGGGTCGCAGCTCGCTCCGCGCCGTGAGAGTCAAACCCACGCGTCAGCACGCGCAGCCCGCCACCGCACCCAGCACCCCCCCCACTCTGTACCCCCTGCTGGCGGAGTCCCTCTCGGCGGGTGGCTCCccccccgcgccgcccgcctcCGCTCCGCCCGTCACCAACTTCGGCATCCACCGACCCGCACCGCCGCACCACTCTAACAGTGACGACGAAATCGTAGAGGTCCCGTACAAGCCTAAAACCCCCGAAATCATCGACTTGGACGAATACCCGGAAGCGGACAGCCCCGAAGCCAGCACCAAGAAAAAACGGCTCGACATCCTCAAAGAGCGGGGGTTGGAGGTCACCCCCCTCCCCCCCTGGCCGACCCCGGTCACCCCAGTCCTGGCACCGAACCCCCTACTCCTCAACCCGGTGCAGCAGCAACTAATGGCGTCGCAAATGTACGGGTATTACAATCCCCCAGTTGTTGTCGCTCCTATATACCCCAACGGGGTGCTACCCCCTCGAGTTATCCAAGCTACGTCTATCTACGGGTCTTCTAGCCCTGAGAAAACTGTTTACGGTAACCCGAAGGATCCCTTCATGCCGCCCCCGCACACGTTGCATGGGGTGCCTATCAAACTCCACAGGGTACAAGTGACCCCTAACACCCCGAACCAGCAAGACATATTAGATTTAACCTGCAAAATGTCTAAACCAGCAGTTGAAATTGTCAGAGTTCCCACAACGCCATCACCTTCGAAACAACAAAATCAAGCTAAAAACTATTCTATCGTCGACGGAAAGGCtgtagtgggttcaaacctggagATAACGCTCGTGAACAAAGCGCAAACGCCCCCCAAAAAGGAGTCGAGCCAGCGACCCCAGAAGCGCTCCTCGAACGGTAAATTCGTAGCGAAAACCCCCACGCCCCCTAAAGAGCAGAAAATGCAGAAAAAACCGACTATTACCGTCCCCACATACCAAGTAAGGGATGATCCATCCCCCACTGGGTCTGTGCACTCCACGAGCTCTCGCGAGAGCCAGAAGGAACCACAGAAACAGGCCCCAATATCCTCTTTCCTAGACCCGTATATGGCTCTATACAGCCTCGCGGGTCAAATGGACCCCAGACTGATGGCGGGTCAAATCGACCCCAGACAACTAGCAGCGTACAGAGAGGCAATGGTCAACCAGTTTAGAGGTTACTCGCATTTGCTAAACATGGGGGTTGCTAACCCCACAACGAAGAACTAA
- Protein Sequence
- MHEVLAINDKVVLKAEDLLSWICTGDSWTWGMRAVWRGACAPPAEDKETAPLHHTKLDFSDIDKEKSAIVVEPEEAGVVVFSYPRYCRYRAVAARLQGLQADWLRDSLVAALGGYAAPTTNTRILYCKETFEYPELEGHEYVCSHLAPRLKGRPRGRRRRARSRTHSPSSPDSDDRPDDYTAVTPPSGPRRLSLRNGPEKISGPSLPEEEGKYLPEERDFLRRLKHFYKGRNESLDKAITLKHITLSSVYAIVTSRGGYDAVCRHKLWRVLFTEQPVYTRRHYERYLLAFEHHERRNGSRINGLTQLIDTIHVADSPLRDEKPHSPFKHNIDCETGEIKDEHMISSKPASELNLEFLASLPEHPKLLVRSADELMAPRDRMHWITPNKAAHEFGSSAPPPPSAPPLAPASAPAPLALLNGHGHTHPSMEQVHRPLGRSSLRAVRVKPTRQHAQPATAPSTPPTLYPLLAESLSAGGSPPAPPASAPPVTNFGIHRPAPPHHSNSDDEIVEVPYKPKTPEIIDLDEYPEADSPEASTKKKRLDILKERGLEVTPLPPWPTPVTPVLAPNPLLLNPVQQQLMASQMYGYYNPPVVVAPIYPNGVLPPRVIQATSIYGSSSPEKTVYGNPKDPFMPPPHTLHGVPIKLHRVQVTPNTPNQQDILDLTCKMSKPAVEIVRVPTTPSPSKQQNQAKNYSIVDGKAVVGSNLEITLVNKAQTPPKKESSQRPQKRSSNGKFVAKTPTPPKEQKMQKKPTITVPTYQVRDDPSPTGSVHSTSSRESQKEPQKQAPISSFLDPYMALYSLAGQMDPRLMAGQIDPRQLAAYREAMVNQFRGYSHLLNMGVANPTTKN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00638438;
- 90% Identity
- -
- 80% Identity
- -