Cpec000256.1
Basic Information
- Insect
- Colostygia pectinataria
- Gene Symbol
- REF6
- Assembly
- GCA_951394395.1
- Location
- OX596348.1:4002056-4018804[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.2e-15 5.3e-12 46.4 0.0 9 89 33 111 23 111 0.81
Sequence Information
- Coding Sequence
- ATGTTCACCACAATGAACCAGTATCTAGGCCGACTGTACCAGCGATGGGGACCTACTTCAAGGGAGTTCACCGCAATACAAACATATGTGGCTAAGCTCTCTAATACCAGAGAAAGAGATCAGTTCACCAGAGCACCTATGTTTGATGGAGTTGAACTCGACATAGTGAAGCTGTACCATATTGTACTCGAGAACGGCGGCATAGAGGAACTGTTGGCGCATGGCGAGAAATGGACGCGCGTTGCGGAACAGATGTCTTTGGTTTCGCCTCGCGGGAAACCTGATCAAAAGAAACTAGAGAAACTTTACTGCAAACATGTGCTACCCTACGAATCACTATCACAATcCGAACGACAACAAAACCAAGAAATAGTGGACAAAGTGTGGTTAGCCCGCTCCAAGCGCGCCTTGAAACGCTCCAAGCGTCCGCTGCACGACCAAAAGCGACAGCTTGGTGAGACAGAATCTGATGACGACGAGGAAATGCCATTGGACCGTGCCGCTTTAGAGTTGCGTGCAGTTGGGAAGCAATGCTTTGACCGCATCGATGAATGCACTGCCAAAGGACGGACTATGAACCTCAGCACCTTCCGTCGGATTGGTTCACAAATCCAGGCAATGCGTTTTGGAAACGGGTCTGCACCGACCACAGCAGACATTGAGCATGATTACTGGGACATTCTCTCTCACGGCACAGAGCATGTATGCGTACTGTCTGCGTTCATAGATACCTCGGTCGACAATCTGGGCCACACATCGGACCCCGAGGGCCCTGGTGGTAGTCACGCTTGGAACTTGAAGCGTCTCAGTGAGAACCCGAAAAACATACTAAGGTCTCTTGGCAAAACGCTGAGCGTGACGGTGCCCACGCTCTGCTTGAACCAAATGCACAGCACAAACTGCTGGCACATGGACCCACATAAACTATCCTGGATGGATTATATGCACGAAGGGCCTGCCAAAATATGGTACGCAGTGTCTGAGCCCGATTCAGAACAATTTCGTCGCACAATGGAGATCCTTGTGCCCTCCGCTGTACAGAACAAAGGCATTTGGCTCACATCGGACACGATAATGGTACCGCCGTGCCATTTGACTGAAAGAGGCGTCAAGCTGCGGAGGATCGAGCAGAATCCTGGAGAGTTCATTGTAGTATTCCCCGGCGCTTGTGCTTCCACCGTCGCCACCGGCCTTACCATTTCCGAGAGCATTTACTTGGAAAATAAAAACTGGATTTACAGCATCGACCAGATATTCCAGCAAATGCATCGAGACTGCGAGCCCGCGATGTTCTCGAGCACGCTACTGCTATTCCGCATAGCACTAGACCCCGATGTCATTTTTGAAGTGCTTCCTCACGTGCTCGTCTGTACGAAGGCGCTTCTGTATGAAGAATACGAAGCGAGACATGACGCCAACGAGTTAAAGTGCAAAATCATCGAAGACCAGACGGACCGTGCTGGACTGGAGCCCATTTCCTGGACTCATCAGGAGGAATGCAGCCTCTGCCGAGCGCCACTCATCCTTTCCAAGACGTGCCGCTATAACGATCCGCGCGTGCTGATGTGCCTGAAGCACGGCCTGCGCGTGTACGAGTGCGCGCCCGTCGCGGAGCGCGGCCCGCCGCCGCCCGTGACGCTGCTCTACTCGCACTCCAAGCTGCGGACCATCGTCCGCACACTGGATAAACGCATCTCTGGAATTGTCACAGACTTGACTACAGGCTTGGCAAACCCCACCGGATGGACCAGTGGATGTAGAAGAGGAAGCGGAATAGTTGCGATGTCGCAAATCTGCGACGCCAGCATGTCTCAAGCCAAACCGCAATCTCCAAGACGACGTGTTTACTGGTGGTCGCAAGATTTGAAATTGCTGACCTCCGCAGAAACTGCATAG
- Protein Sequence
- MFTTMNQYLGRLYQRWGPTSREFTAIQTYVAKLSNTRERDQFTRAPMFDGVELDIVKLYHIVLENGGIEELLAHGEKWTRVAEQMSLVSPRGKPDQKKLEKLYCKHVLPYESLSQSERQQNQEIVDKVWLARSKRALKRSKRPLHDQKRQLGETESDDDEEMPLDRAALELRAVGKQCFDRIDECTAKGRTMNLSTFRRIGSQIQAMRFGNGSAPTTADIEHDYWDILSHGTEHVCVLSAFIDTSVDNLGHTSDPEGPGGSHAWNLKRLSENPKNILRSLGKTLSVTVPTLCLNQMHSTNCWHMDPHKLSWMDYMHEGPAKIWYAVSEPDSEQFRRTMEILVPSAVQNKGIWLTSDTIMVPPCHLTERGVKLRRIEQNPGEFIVVFPGACASTVATGLTISESIYLENKNWIYSIDQIFQQMHRDCEPAMFSSTLLLFRIALDPDVIFEVLPHVLVCTKALLYEEYEARHDANELKCKIIEDQTDRAGLEPISWTHQEECSLCRAPLILSKTCRYNDPRVLMCLKHGLRVYECAPVAERGPPPPVTLLYSHSKLRTIVRTLDKRISGIVTDLTTGLANPTGWTSGCRRGSGIVAMSQICDASMSQAKPQSPRRRVYWWSQDLKLLTSAETA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -