Cgig008864.1
Basic Information
- Insect
- Colletes gigas
- Gene Symbol
- SNAPC4
- Assembly
- GCA_013123115.1
- Location
- WUUM01000001.1:13223587-13226331[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.17 1.4e+02 2.5 0.1 3 18 165 180 164 192 0.89 2 5 2.1e-12 1.7e-09 37.4 0.8 1 45 260 306 260 307 0.95 3 5 5.8e-06 0.0048 16.8 0.5 4 44 317 361 316 363 0.96 4 5 1.4e-12 1.1e-09 38.0 0.0 1 43 369 412 369 414 0.96 5 5 1.3e-07 0.00011 22.0 0.0 3 36 424 457 423 462 0.86
Sequence Information
- Coding Sequence
- ATGGACAAACTGTCAAGCGACGATGATATAGCCGAAATACTGTTATTGAAAAACCTGCCACCTAAATGTGAAAACGaagaatatgttaaatttactccaaaaattgaaaaatccaTACCAGAAAACAACTTTGAGGTATTTATCAAAGATTGTACATCGCAAGACAAGTCTCAACATCaagttaaaaatgaatttatggaATGTAATATCGAAGACTGTGACAGTTTGCTGAATTTCAATAAGCAGATAATCTCTTATTTGTTGGATTTGAAAAAACACATAACCTATGTTCTTCAAAagtgtgaaaaaaaattgaaagtggTAGAGTCAAATTTACAGAAACATACAATCGGAGATACAAAGATTTTGATTTGCAATGCCGGTATGCCATATTTCAAagacagaaattatttctttgctCCTAACAACGACGACGAAACATTAAAAGAGAATCATAAAGAATTACAGCTTAGAAATCTTCCTAAAGTTTCACCATGGACAATAAAAGAAAGATACACCCTTTTGAAAGCGGTACAAGAAGAAACTATTGCAAAGGCGTTACACTCTCAAAAGATAGAATATATAAGGCTCAATGgggtaaagaaaaaaaagaagaaaaccaAAAAATTTCCACCTACAGATTTGGTAGAAATGATTGGTCCATTAGGAGGAAGGGAATTCGATTGGTTTAAAATATCGTCTATCCATTTTGAGGAGATACATGCACCGCTTGACTGTCGTATTATGTGGAATAGTTTTCTTCATCCCAAGATCAACAAAAACTGTTGGACAAAACCAGAAGATAATAAGttgaaagaaattgtaaagaactataaatatcaaaattggGATGGTATTGCCAAAGAATTAAACACAAATCGTACAGCGTATCAATGTTTCATTAGATACAACACAACAAAAAAATTGCCTAAAGTTAGAAACTGCATTTGGGAAAGCAAAGAGGACGAAAGACTTTTAAAGTTGGttgacatatttaaaattggtgACTTCATTCCCTGGGGTGAAGTAGCCAGTTGGATGCAAAAGAGAACTAAACAGCAAGCTTATTTCCGATGGAATTATAGTTTGGCCCCATATTTAACGAAAGGTAGATTTAGCAAATCCGAAGATAATTTGTTGAAGGATGCCGTCACTAAATATGGTACAAATTTTAGCAAAATATCAGCTGCATTGATGCCTAACAGATCAACTGTTCAACTTAATTATCGTTATCAATTATTAACTACCAACGAAGATAAAAATTGGAATGTATGGACGCTCACGGAGGATTCAAAATTGCTTGAACTCTACAAATGCTTTGGGCCAAATTGGTCTAAAATATCTGAAGCTTTTTCGTGTAAAACTAGGACTTACCTAAGACATCGACATGCAgctttgcaaaaatatattaagagGGGTATTTCCGTTGTTGAGTTACACAAGAAAGATAAAAACGAAGGGCAGCAAAATCAGAAGGAAGAGGAATCTAAACAGAGAAGTAATAACAGGTTAAACAGAGATTGCGGAAACGATGTAGATCAAGAATTAATCGAGTATTTCTATATGAAACAAGCAACAGTAAACTCTATTCAGAAAAGGAGACATTGCTCGGTAGAAGAACTTGAGCgcaatacaaaaaaattgtatagcaCTTTACAGCTGCTAAATGCTAAACTTAATATACCCGACGAcattagtaatttaaaattaaacaatcgCGAGAAACAACTTTTATGTTCCTTGAGAGAATACACAAAGATGAAGAGTGATAAGAGACGACAATTTGAAGTTATAGATAAGTGTAGCTCGCTTATGTTTGGAACAAATTGTGATACAAAAGACGCCACTCATTACATACCACCACCTCCTTTTGACTCGCagatcaaattgaaaaaattaaaggaaacTCAGTGCATTGATTATCatctaaatacaaataatacttTCTTAGTTGTAAAACCAGTAGACTTCAACACGCCAGACTTTGTAATCGCTCATATCGGCGGCAACGAGCAAGAACTACAATTTCAAAAGCTCAGTCAATTGTTTGAAGTTAATAGTTTAAAGTGTAGACAGAGTGCACATAGTATCAAAGATTTTTGCACTTTTTCAACTGGTATACCGCTACAACAAAATAATAGTAGCAATAGTTGTAATAGCAATAATAggaataattttagtaataatGCAGTgcaagaaatgaaatttattgctTGTTGCGAGAATCTTTCTGTTaattcttttgaaaataacaGTACTCACGATTATAGCTGTGTTAAGTTAAAGAGCGAAGATCACGAGGAATCGTGCGAACAAACgacgaaaaatattacattatttaatacgtTAGAGAAGATACAAAATTGTGCATCCACTTCTAAcgtagaaacaaatatagaacAAGATATACCCTCGATAGAAGCGACGCACGCAACGCTACTGAGTCTAAAGAATTTAATGTATTTGAAACAATTGAACGAAACGTGCAATAATATACATCAGTTTTTCAcgaaatcaaagaaatttcaagaatCGCTTAATTTACTAGAAACACGCCTCGAACAATTGTTTATGTACCCGATTGGCCAGTCAAAAACTGCATTACCGAAAGTTTACGTAATGGATGCATTTTCATACGATGATATTGCACCAAAAAGAAAAGCTTCTGAAATGTCCAAAATTCTAAAgccatataaaacaaaaaggtTACATTCGTACGATAAAAAGAGTAAAAGTCTAAGATAA
- Protein Sequence
- MDKLSSDDDIAEILLLKNLPPKCENEEYVKFTPKIEKSIPENNFEVFIKDCTSQDKSQHQVKNEFMECNIEDCDSLLNFNKQIISYLLDLKKHITYVLQKCEKKLKVVESNLQKHTIGDTKILICNAGMPYFKDRNYFFAPNNDDETLKENHKELQLRNLPKVSPWTIKERYTLLKAVQEETIAKALHSQKIEYIRLNGVKKKKKKTKKFPPTDLVEMIGPLGGREFDWFKISSIHFEEIHAPLDCRIMWNSFLHPKINKNCWTKPEDNKLKEIVKNYKYQNWDGIAKELNTNRTAYQCFIRYNTTKKLPKVRNCIWESKEDERLLKLVDIFKIGDFIPWGEVASWMQKRTKQQAYFRWNYSLAPYLTKGRFSKSEDNLLKDAVTKYGTNFSKISAALMPNRSTVQLNYRYQLLTTNEDKNWNVWTLTEDSKLLELYKCFGPNWSKISEAFSCKTRTYLRHRHAALQKYIKRGISVVELHKKDKNEGQQNQKEEESKQRSNNRLNRDCGNDVDQELIEYFYMKQATVNSIQKRRHCSVEELERNTKKLYSTLQLLNAKLNIPDDISNLKLNNREKQLLCSLREYTKMKSDKRRQFEVIDKCSSLMFGTNCDTKDATHYIPPPPFDSQIKLKKLKETQCIDYHLNTNNTFLVVKPVDFNTPDFVIAHIGGNEQELQFQKLSQLFEVNSLKCRQSAHSIKDFCTFSTGIPLQQNNSSNSCNSNNRNNFSNNAVQEMKFIACCENLSVNSFENNSTHDYSCVKLKSEDHEESCEQTTKNITLFNTLEKIQNCASTSNVETNIEQDIPSIEATHATLLSLKNLMYLKQLNETCNNIHQFFTKSKKFQESLNLLETRLEQLFMYPIGQSKTALPKVYVMDAFSYDDIAPKRKASEMSKILKPYKTKRLHSYDKKSKSLR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00360137; iTF_00360832;
- 90% Identity
- iTF_00360137; iTF_00360832;
- 80% Identity
- iTF_00360832;