Cgig014462.1
Basic Information
- Insect
- Colletes gigas
- Gene Symbol
- Mblk-1
- Assembly
- GCA_013123115.1
- Location
- WUUM01000004.1:5151878-5163929[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.7e-18 7.2e-15 54.2 0.1 1 45 547 592 547 592 0.96 2 2 1.1e-18 2.2e-15 55.9 0.0 1 43 978 1021 978 1023 0.94
Sequence Information
- Coding Sequence
- ATGGGCCGTAGGAGATGGAAGCAATATcaggacaccctgtacagcGGTACTCGCAGCAGCGAATCACTGACGACACAGCCCCACCACCGGCTCTACCCGGCGTTCTCGTCGTCCTGCGACCCGGTACCCGGGAACTTGGAACAAATTGGCCCGCGTACGCTACATCCTGCGTCCTCCTCGTTACCCACGACGATAACGACGACAACGAGCACGGTGTCGGCTGcagcgacgacgacgacaacacCGCCAACGACGGCggcggcgacgacgacgacgggtTTGGTCAAGCAGGACAGCTTGCAGAGGCATACCCTGCAGAACCATCATCACCTACAGTCCTCGGCGCAAGATCATCACCGCCATTaccagcagcagcagcatcagCAGCATCAGCAGGAGGACCAGCGTCGCCTCAGGCCAGACGAGGTGAAGGTCGAGGTCGGCGAGGACGAGTTTGCGAACGGTGTCGGGCGAGAGGAATCTGCAACGAAAACAACGGACACATCGACAGCGACGACGGTAACGGCGTCAACGACGGCGACAACGGGAACGAGCATCGTTACCACCACCAGCAGCACCGGTACCGGCACGATAGCGACGATCGCGTCGGCGAACACCACGGCTACCATGACCACGGGAACGACCACGATTCCGACCAGGCGAAGACGCAAACGCCGGCAGAACGACGGGGACGGTGCCACGGACGACAGGGAGGACGACGACGAgaacgaggaggaggaggagggacGGGGGCAGAACGAGGCGGAGAAGCGGCTGAAGCTCGATCAGGATGCGGACAGGCCCATCAGCCCTCTCAGGAGAGACAAGGACCGAGCAACTCGGGATTATTCGACTGGCAACGCTACCGACACGGAAGGGACCAAGGAACGAACGGAAGAAGTCGCGTTGGAGCGGACACCGGTAACGCAGGGCTTGCTGAGAGTGAAGAAAGAGGAGGAGTTGCAGGAAGTGCCAGGTTCTGAGGGCGGCCCAACGATATTGACGACACCGGCGCCGGATTCGGATGGGACCAGGTCAGGGTTGTCGTGTCGGGAGGTTGACGCGGTCGCGAGGAACACTGTGGCGCCGTGTCTGATCGGAGGACGACGCATCAGCCCACCCCCGGAAGACTGGAAGCCGCTGGACAAGTGTTACTTTTGTCTCGATGGCAAGCTGCCGCACGATGATCAACCACCCCTCAGTCCGCAGAGCGACAGCAGCAGCAGCTCGCGATCGGCCGAGTCACCGATGTCGGTCCAGGTGGATCCGATGGCGGCTTCCGTGGTCGCCGCGGCTCTCAGCGGCACCTATCCCACCCTGCTACCCCAGTGGTGTCTACCACCAAGGGAGGCGCCTCTCGTTGGGGTGCAAGCTCATCAGGACAGCGCAACGCCGGTCGACCAACCGCTCGACCTCTCGGCCAAACCCAAAAATTCTCAGGACAACAACATATCTCTATTGGAGCAACAGAAAATACCTCTAAGGATGCCAGCAGGTATCGACCCCAAGAGTATCTTTACTTCGTATCGCGCGAAACCGCGTATGACCGGGCCAGTGTCGACCGTGGCGGCGGCAGCAGCTGCGGCAGGGGTCGGTGGTGTCCCCGTGGTGGGTGCAGGGGGTGGCCGGAGGACCTACACCGAGGAGGAGCTCCAGGCCGCCCTTAGGGATATCCAGAGCGGCAAGCTCGGTACACGAAGGGCGGCCGTGATCTACGGAATACCGCGTAGCACCCTGCGCAACAAGGTCTACAAGCTTGCGATGGAGCGCGAAAGGGACGCGTCCCTGACTAGCACCCACTCACACCCTCACGAGTCCGGCGCCCCagccaccaccaccaccaccatcaccaccaccaccaccacaactactactactactactactactactacacCACCAAATACGACCCAAAACGCCTCCGCGACCACTCCGCCCCCGCAAGTGGATGAGGTGGACGACAAGGAACTCTCCGGAGCCGAAGAGGAGAAAGAAGTCGAAAAGGCCCTGCTGAAACCGTTGTTGTCTCTGGAAGATCTCGTCAGGTTCTCCGCTCTCGAAGGAGGCGGCGGGGATTCCTTAAGGACTTTGCTTCAACGGGGACAGGAGACGGGGACCGAGTGGCCGGGCCTCGAACACGCGAATATCGGCCCGTACATACAGAAGATGCTTGCCGCGGCCGCGCCTTTCAAAGGTCTGGAGACGCAAGACTATCGCATTCCAGAGGTGATGAGGAGGCTGATGAGCGAAGACAAGAGGCTAAACAAGAGCGTAAACGGGGACCAGTCGCAGTCGCATCATCAGCAGTTTCATCACCAGCAGTCCCACGGGACTCACTCGCAGGCGCAGACGCAGTCGCAGTCGCAGGCGCAACAGCAACGCGGACCGATCACCAACGACGACTTCAATCCGAACATCGAGGAGGAGGCGAGCGACAGTGGTCAAGGTAGAGCTATTCTGAAGATTCCGTCCTACAAGCCCGCGAGCACCCCGGGATGTTCGAGCAAGAACGGCGAACCAACTTCCGCCGCTTTCGCGCAAGGATTCGCGGCCGCGGCCTCGAGTCCGGGCCTCCTGGAGCGGGCCTCGCCCGCCTTCTCCGGCACCAGCAGCCCGACCAACTCGCTCGTGGGGAAGACGGTAGCCGTCAACTTCCGCGACGTGATCGCGAAGAGCATCAGCGTGAAGTTCCAAGAGGGCCAGCCGGTTACCTCGGCCGGGATGCCCGGATGCCAGTCCGCCGGGGTGGTGCAGTCGCAGCAGACGATGATGACGGACAGTCCGTTCAAGAGAGGTAGATACACGCCGCCGCAGCCGGCGACGCAACAGGCGCAATCGCAGCCGAAGCCGCAGTCCCAGGAAGCGAACAAACCGAAACAAGCTACCGGTGGCAAGGGAACAAGACCGAAACGCGGCAAGTACAGGAACTACGACAGGGATAGCCTGGTCGAGGCTGTACGCGCCGTTCAGCGGGGCGAGATGAGCGTGCATCGTGCAGGCAGCTATTACGGAGTACCCCACTCCACCCTCGAGTACAAAGTTAAGGAACGGCACCTCATGAGGCCAAGGAAGAGGGACCAGAAGCAGCCGGACGACAAGGCGAAAGAGACGGCGGCtgtggcggcggcggcggcggccgCCAACATGCGACCGGGCACAGCCGACAAGAAGCCGCAGCTGAAGCCGCAGAAACCGTTCACACCTCCCGGCGGTATACCGGGGCCCAACGGACTAAAGATGCCGCCGTTCATGGAGGGCATGCCCCATTTACCGTTCGGGCCGTTCAACTTTTGGAATCCGACGCCGTTCATGCCGTCGCCGTTCATAACCGGGGCGCCGAACGTTCCGGGGATCCTGCCGGAGCAGTACTTCGCGACGAGTCGGATACGCGGGCTGCAGGAACAGCAGAGGAACGCGGCGATGGTGCAGCAACATCAGCAGAGGGACAGGGACGGGATCGGCGTGGCCGCGACCACCGCGGAGTCGCCGGGAACCTCGAATTCTCGCGGTACACCGATGACGAAGACGCCGCGGGAGGTGACGGAGAGCCTGTACGACGGCTCGGGGGCGAACGGCAGTTTCCTGGACAATCTGATCAGGTCGAGCCTCGAGACGGGAATCCCCAGGGACCAGAGGGCGATGGCGGAGGGTAGGAACCAACAACAATCGTCCTCGCAGCAGCAACAGCTACCCGAATCGATGAGGAGCAAAGCGTTGATCGACCAGCTGTGCAGGAACTCGAGGAGGACGCCGGTGCCGCGGCTGGCACAGGACAGCAGCGAGGACGAGAGTTACAGGGGACCATCGGCTGCTGGGAGGCCAGTCCCGGAGAGGCCGGAACGCGTGCCCACCGTCGATCTAAGCCCGTCGCCGTCGGAACGGGGCCGCACCGACGACGGCAGCGACCGATTGACCTCGCCACCGACGCCGCTTTCGGTATCGAGGGCCGGCAGCAGGGACGACGATCGCAGCAGCAGGGAACGCGAGGTTCACAACGGTGGACAAGAGGATCGCGATAGAAAGACTCTGACCGTTCAGCAGCAGCAGCCGCCGCCGCCGCAGCAGCAGCAGCTGAATCACTACCCGGACTTACTCTACGCCGTATCAACTGACAAAAAAAGTGCCTGTGATAGTAAGCTTATAGTAGATCATTCGAGCCAGAAGActcagcagcaacaacagcagccgCAAACGCAGCCGCAGCCGCAAccgcagcagcagcagcagcagcagccaCAGCAGCTGCCGCAGCAGCAACAGAAGGAGTACGCTGCCGTGAGCGGACTGGTCGTGCAACTGCAGCGGGGCTACAATACCGGGAACAGCAGGTCCGGTGAGCAGACCAACAGCCAGCAGTCGGCGGATCAACGCGGTCCAGCGATCAGTATGGAAGACTCCGTTGAGCAGTAG
- Protein Sequence
- MGRRRWKQYQDTLYSGTRSSESLTTQPHHRLYPAFSSSCDPVPGNLEQIGPRTLHPASSSLPTTITTTTSTVSAAATTTTTPPTTAAATTTTGLVKQDSLQRHTLQNHHHLQSSAQDHHRHYQQQQHQQHQQEDQRRLRPDEVKVEVGEDEFANGVGREESATKTTDTSTATTVTASTTATTGTSIVTTTSSTGTGTIATIASANTTATMTTGTTTIPTRRRRKRRQNDGDGATDDREDDDENEEEEEGRGQNEAEKRLKLDQDADRPISPLRRDKDRATRDYSTGNATDTEGTKERTEEVALERTPVTQGLLRVKKEEELQEVPGSEGGPTILTTPAPDSDGTRSGLSCREVDAVARNTVAPCLIGGRRISPPPEDWKPLDKCYFCLDGKLPHDDQPPLSPQSDSSSSSRSAESPMSVQVDPMAASVVAAALSGTYPTLLPQWCLPPREAPLVGVQAHQDSATPVDQPLDLSAKPKNSQDNNISLLEQQKIPLRMPAGIDPKSIFTSYRAKPRMTGPVSTVAAAAAAAGVGGVPVVGAGGGRRTYTEEELQAALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLAMERERDASLTSTHSHPHESGAPATTTTTITTTTTTTTTTTTTTTTPPNTTQNASATTPPPQVDEVDDKELSGAEEEKEVEKALLKPLLSLEDLVRFSALEGGGGDSLRTLLQRGQETGTEWPGLEHANIGPYIQKMLAAAAPFKGLETQDYRIPEVMRRLMSEDKRLNKSVNGDQSQSHHQQFHHQQSHGTHSQAQTQSQSQAQQQRGPITNDDFNPNIEEEASDSGQGRAILKIPSYKPASTPGCSSKNGEPTSAAFAQGFAAAASSPGLLERASPAFSGTSSPTNSLVGKTVAVNFRDVIAKSISVKFQEGQPVTSAGMPGCQSAGVVQSQQTMMTDSPFKRGRYTPPQPATQQAQSQPKPQSQEANKPKQATGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKRDQKQPDDKAKETAAVAAAAAAANMRPGTADKKPQLKPQKPFTPPGGIPGPNGLKMPPFMEGMPHLPFGPFNFWNPTPFMPSPFITGAPNVPGILPEQYFATSRIRGLQEQQRNAAMVQQHQQRDRDGIGVAATTAESPGTSNSRGTPMTKTPREVTESLYDGSGANGSFLDNLIRSSLETGIPRDQRAMAEGRNQQQSSSQQQQLPESMRSKALIDQLCRNSRRTPVPRLAQDSSEDESYRGPSAAGRPVPERPERVPTVDLSPSPSERGRTDDGSDRLTSPPTPLSVSRAGSRDDDRSSREREVHNGGQEDRDRKTLTVQQQQPPPPQQQQLNHYPDLLYAVSTDKKSACDSKLIVDHSSQKTQQQQQQPQTQPQPQPQQQQQQQPQQLPQQQQKEYAAVSGLVVQLQRGYNTGNSRSGEQTNSQQSADQRGPAISMEDSVEQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00215624;
- 90% Identity
- iTF_00360128;
- 80% Identity
- -