Basic Information

Insect: Colletes collaris
Gene Symbol: stc
Assembly: GCA_030068185.1
Location: JASGYR010000321.1:1328878-1333370[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 2 3.2e+04 -4.4 1.6 15 19 568 572 567 572 0.81

2 14 0.085 1.3e+03 0.3 0.4 4 10 601 607 600 607 0.95

3 14 1.7e-05 0.27 12.1 13.4 4 18 618 632 616 633 0.95

4 14 6.7e-06 0.11 13.4 13.9 1 18 669 686 669 687 0.96

5 14 3.4e-08 0.00055 20.7 9.2 1 19 725 743 725 743 0.98

6 14 7.2e-06 0.11 13.3 12.9 4 18 790 804 783 805 0.86

7 14 2 3.2e+04 -4.7 1.6 5 10 834 839 834 839 0.90

8 14 0.00059 9.4 7.2 8.4 1 11 845 855 845 856 0.97

9 14 1.5 2.3e+04 -3.7 0.6 4 10 860 866 859 866 0.86

10 14 2e-10 3.2e-06 27.8 13.8 1 19 872 890 872 890 0.98

11 14 0.8 1.3e+04 -2.8 1.0 5 10 918 923 918 923 0.92

12 14 2 3.2e+04 -7.2 10.0 10 19 937 947 929 947 0.69

13 14 0.00012 2 9.3 17.2 1 16 983 998 983 1009 0.87

14 14 1.1e-05 0.18 12.7 14.1 1 19 1015 1034 1015 1034 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	2	3.2e+04	-4.4	1.6	15	19	568	572	567	572	0.81
2	14	0.085	1.3e+03	0.3	0.4	4	10	601	607	600	607	0.95
3	14	1.7e-05	0.27	12.1	13.4	4	18	618	632	616	633	0.95
4	14	6.7e-06	0.11	13.4	13.9	1	18	669	686	669	687	0.96
5	14	3.4e-08	0.00055	20.7	9.2	1	19	725	743	725	743	0.98
6	14	7.2e-06	0.11	13.3	12.9	4	18	790	804	783	805	0.86
7	14	2	3.2e+04	-4.7	1.6	5	10	834	839	834	839	0.90
8	14	0.00059	9.4	7.2	8.4	1	11	845	855	845	856	0.97
9	14	1.5	2.3e+04	-3.7	0.6	4	10	860	866	859	866	0.86
10	14	2e-10	3.2e-06	27.8	13.8	1	19	872	890	872	890	0.98
11	14	0.8	1.3e+04	-2.8	1.0	5	10	918	923	918	923	0.92
12	14	2	3.2e+04	-7.2	10.0	10	19	937	947	929	947	0.69
13	14	0.00012	2	9.3	17.2	1	16	983	998	983	1009	0.87
14	14	1.1e-05	0.18	12.7	14.1	1	19	1015	1034	1015	1034	0.96

Sequence Information

Coding Sequence: ATGGCCACATGGGATGGTTCTTATTCAGGACCGAACGATCAAAATTACGTGTACCCTGATCAAAATACTCCAGGCACTGCTGCAGGAAACTGGACGTATTTTTCGAACAATTTAAACAACGATTATCTGCAAACTAATCGCGAATTCTACGTGCAAAACAATTCCGTGTACGAGCAAAATTGCCCGAACACCTTTTATCGTTCGGACGCGAACGTTGTGCCAAATCTGTTGTCCCAGACTAACAATTATCAGGAGCATTTGACAAACGCTGTAGACAATTCTCAAATATCGAATAATCTCGAATATTTTCCGACCGTCGTCAAGTCCGAACAATATTTTGTACCCGTCGATTGTTGGAGCAATAATTACGATATAAAAACATCAAAGAGCAAAGGTAATTTTGCGAAAGGAGTTAAAGAAACTGTGCCCAACGTAACCAAACAGTCAAATTTGCATGCAACCGCCGAAGAGTTTGTGCCAAATCATGTTAAACCGGATGACGAGAAGCACGAATCGAAGAATGTAAATGTTCCTTGTTCCGCCGTTCATGCGGATTCTTATATCAAGGATACCAAACTTGCTCTTAGAACATCAGATAAATATACCTTTGGTGatgtaaataaatatgaaaGAAAGTATGATAAAAGAAATGTAAATTATAAGCCCAAAGAAGGACAAGATCAGTTTtataaaagaaacacgtatAAAAATTCTTATCAGCAACAAGGTAGGGCTTCTCATAAATTTCAAGGTAATAAGTACTTTGCCGATAAACATTATTCAGATAAATCGCAAATAAATGCAAAAGACATAGGTGCTAACGTGTCGGGTAGAAATACAATAAATGGTAATAGTTCTTGTAATTATAAAGAAGCTTCTGCGATAAATTTAAACGAAAGAGAAGCCTCTTCGAGTATGAATGTAAATTcgcataaaaataaaagatcatTAAATGATGGCAGCGATAAAGGAAATACCATTACCAAAGATGAGAATGCAGAATCCAATGGAACGAAACAGTCCAATAATCGAGTCAAGGAATTTACCTATTATAACTCTGGTTCCATGCAATTGCATAATCCTCATAGAAATACAAAGAAATATCCATACAATGCTAGGCATAATAACAGAGAAGAGCACAGTTACAAAGAGAAGAAGCGCAATTATCAGGGGCATAATGTAATTTGGGATAACCATAGCAAAGAAAATAAACCTGGTGCGAAAGAACAAACGTACAGTCACGAGGAATCTAACGAGTTTAGAAAATGTTCGAACGAGGAAGCCAGACTCAGAACAAAGGAAGTTAAGGAAAGGGGGTATAATTACCAAGGATATGTCGGATATAGGGAGTACAATAAAGGTGATAAAACTGAAGTTTCCAGAGAGAAAGATAGAAATAAAAGTTATACGTTTGAAAGTAAAGAAAAGGGAAATGAAAATTGGAGATATAAAAGAGAAATTAATGAAAAGAGTAGTCTTCAAAAGCGGGAACAGAATAAGAGACCTTCGATTGACGACGTTGCGAGTCAAAGGGAAAGATTGACGGATCAACTGAATAAAGGGCAACTAGAATGTCTAGTGTGTTGCGAAAACATGAAACAGAACGATTACATTTGGTCATGTTCCAACTGCTATCATGTCTTACATTTGAAATGTATTAAGAAGTGGGCAAAATCATCACAAGGAGAAAATGGCTGGAGATGTCCAGCGTGTCAAAACGTGAGCTTAACAGTTCCCGAAGAATATTACTGCTTTTGCGGCAAGACAAGAGCACCCGAATGGAATCGTCGTGATATTGCACATTCTTGCGGCGAAGTTTGCGGTAGAATATTATCGAAAAATAGTTGCCCTCATAAGTGTACTCTTCTATGTCATCCGGGATCGTGTCCACAATGCATAGCAATGGTGACAAGATACTGCGGTTGTAGCAAAACATCGCAAACGGTACAGTGCAGCACGCATAAATTATTGTTTTGCGACTGTATATGTGGCAAGGATTTGAATTGTAGCAGGCATAAATGCGAAGCGAAATGTCATCACGGGGAATGCGTAAACTGTGAAAAGACAATAGAACAAGAGTGTTACTGTGGCAAAAATAAGAGGGAAGTAACGTGCCAGAAGAACGTTTCTCTTACATACTCCTGCGAAACTGTTTGCGGCAAATTATTGGAGTGTGGTAATCATACTTGTACAAAGTTATGTCACGCGGATGCTTGCGAATCCTGTTCTTTAACCCCGGAGAAAATTACTACCTGCTGTTGCGGGCAAACACCGTTAACAGAGAAAAGACAAACGTGCTTGGATCCGATTCCAGTTTGCAGCAAAATTTGTTCGAAGAGACTGAAGTGTGGCCAACCGAaTAATCCTCATACGTGTAAGGTGAAATGTCATCAGGGAGAGTGTCCCGTTTGCGATTTAACCACCGACGTGAAATGCCGTTGCGGTAATATGGACAGAGAAATTCCGTGCAAAGATTTAACCTCGAAAGCTGACGACGCGCGTTGCGAAAAGAGATGCACGAAAAGAAGATCTTGCGGCAAGCATAAATGTAATCAACTCTGTTGCATAGAAGTAGAACACATTTGCCCTTTGGTGTGTTCGAAAACTTTGAGCTGCGGTAGACATAAATGTGAACAAAGTTGTCATAAAGGAAGATGTCAGCCTTGTTGGCGTAGCAGCTTCGACGAATTGTACTGCGAATGCGGGGCTGCTGTGATATATCCTCCAGTTCCCTGTGGCACGAGACGACCCACTTGCGACAAACCTTGTTCCCGTCAGCATTTCTGCGGACACGAGGTATTGCACAACTGTCACAGCGAGCCAACGTGTCCACCTTGCACCGTCCTTACACAGAGATGGTGTCACGGCAAACACGAGCTACGGAAAGCCGTGGCTTGTTACGTAAATGAAATCTCGTGTGGTTTACCATGCAACAAACCTATCTCGTGCGGCCGGCACAAATGTATCACCATTTGTCATTGCGGCCCGTGCGAGAAGCCGGGGCAACTATGCTTTCAACCGTGCACCACGCCGAGAGAAATGTGTGGACATATTTGCGCTGCCCCCTGCCACGAGGGTAAATGCCCGGAGACGCCTTGCAAAGAAACGGTGAAGGTAACGTGCCAGTGCGGACGTAGGACCATGTCTCGCGTTTGCGCggaaaattcgaaagaatatcaGAGAAAGGCGAGCAGTATGTTGGCTAGTAAAATGGCTGACATGCAACTGGGTCATTCGGTGAATTTGGAGGAAGTTTTTGGTCAGGGGGCAAAGAAACAGAATCAGCTGAAAACCTTGGAATGTAACGAGGAATGTAAAATAATAGAACGTAACAGAAAACTGGCGCAGGGTTTGCAAATTGTGAATTCGGATGTAAGCGGGAAGCTGATGCCCAAGTACAGCGATTTTATGAAACAGTGGGCTAAGAAGGACCTGCATTTTTGTCAAATGGTTCACGAGAAGCTAATAGAATTGGTACAATTGGCAAAAAGCTCGAAACAGAAATCGCGCAGTTATTCGTTCGATAGTATGAACAAAGATAAACGTCGTTTTGTTCACGAGTCCTGTAAGCATTTTGGTTGCGAGAGTCAGGCGTACGATCAGGAACCAAACAGAAATGTTGTTGCTACTGCCGTGAAAGATCAGTGCTGGTTACCCAGCTATAGTCTATTAGACATTGTACAACGAGAGAATGGTCAGAGGAAAGTCCCAGGTCCGATGTTGAACACTTCAAAATCCGATGGACCTGTAAAaACGATTCTATCACTGCCTACAAAAAGGAACCAAAATCCGGAAACGCAATCGAAAACGAAGATGTCTGATCCGGAAATAGACTACTTTGATTATCAAGGTTAA
Protein Sequence: MATWDGSYSGPNDQNYVYPDQNTPGTAAGNWTYFSNNLNNDYLQTNREFYVQNNSVYEQNCPNTFYRSDANVVPNLLSQTNNYQEHLTNAVDNSQISNNLEYFPTVVKSEQYFVPVDCWSNNYDIKTSKSKGNFAKGVKETVPNVTKQSNLHATAEEFVPNHVKPDDEKHESKNVNVPCSAVHADSYIKDTKLALRTSDKYTFGDVNKYERKYDKRNVNYKPKEGQDQFYKRNTYKNSYQQQGRASHKFQGNKYFADKHYSDKSQINAKDIGANVSGRNTINGNSSCNYKEASAINLNEREASSSMNVNSHKNKRSLNDGSDKGNTITKDENAESNGTKQSNNRVKEFTYYNSGSMQLHNPHRNTKKYPYNARHNNREEHSYKEKKRNYQGHNVIWDNHSKENKPGAKEQTYSHEESNEFRKCSNEEARLRTKEVKERGYNYQGYVGYREYNKGDKTEVSREKDRNKSYTFESKEKGNENWRYKREINEKSSLQKREQNKRPSIDDVASQRERLTDQLNKGQLECLVCCENMKQNDYIWSCSNCYHVLHLKCIKKWAKSSQGENGWRCPACQNVSLTVPEEYYCFCGKTRAPEWNRRDIAHSCGEVCGRILSKNSCPHKCTLLCHPGSCPQCIAMVTRYCGCSKTSQTVQCSTHKLLFCDCICGKDLNCSRHKCEAKCHHGECVNCEKTIEQECYCGKNKREVTCQKNVSLTYSCETVCGKLLECGNHTCTKLCHADACESCSLTPEKITTCCCGQTPLTEKRQTCLDPIPVCSKICSKRLKCGQPNNPHTCKVKCHQGECPVCDLTTDVKCRCGNMDREIPCKDLTSKADDARCEKRCTKRRSCGKHKCNQLCCIEVEHICPLVCSKTLSCGRHKCEQSCHKGRCQPCWRSSFDELYCECGAAVIYPPVPCGTRRPTCDKPCSRQHFCGHEVLHNCHSEPTCPPCTVLTQRWCHGKHELRKAVACYVNEISCGLPCNKPISCGRHKCITICHCGPCEKPGQLCFQPCTTPREMCGHICAAPCHEGKCPETPCKETVKVTCQCGRRTMSRVCAENSKEYQRKASSMLASKMADMQLGHSVNLEEVFGQGAKKQNQLKTLECNEECKIIERNRKLAQGLQIVNSDVSGKLMPKYSDFMKQWAKKDLHFCQMVHEKLIELVQLAKSSKQKSRSYSFDSMNKDKRRFVHESCKHFGCESQAYDQEPNRNVVATAVKDQCWLPSYSLLDIVQRENGQRKVPGPMLNTSKSDGPVKTILSLPTKRNQNPETQSKTKMSDPEIDYFDYQG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00361295;
90% Identity: iTF_00361295;
80% Identity: -