Ccol005783.1
Basic Information
- Insect
- Colletes collaris
- Gene Symbol
- gata4
- Assembly
- GCA_030068185.1
- Location
- JASGYR010000078.1:25448847-25482793[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-17 4.7e-14 52.5 3.2 1 34 709 741 709 743 0.97 2 2 9.3e-19 3.3e-15 56.2 2.3 1 35 763 796 763 797 0.98
Sequence Information
- Coding Sequence
- ATGTTCGCAGCGTTGATCGTGTACGTGGACGGAACGACGGAGTACGGGACCGAGGACAGGGGCACGGAGGTCGTCGCGGAgacgttcgaagggaacgaggACGGGGACGCGATGACGAACGCGGGCACGGAGGAGCTTCTTCGACAGCAACAGCTGCTCGAACGGCAGCAACAACGGCGCCAGACCGGGTACGAGAAGCGTGGAAGCGAGGAGGGCGGGGACGGCGTGGGCGTGCTGGAGGCGGGACAGCAGGAAATTGAAAATGGCGCGGCGGCGTCGACGGGCAGCGCCGACGCGGCTGCTATTGCCGTTTCTGCCGATCACGGAAACGATATCAGCGCCACCTACGATCTGCATCCGCTCGACTACGGCGAGCCCGATAGCCCGGCGCTGCGCGAAAGGGGTTATCTCGAACAGGATTCGCGCCGTTACGGGGGCGGCGACCCGACGACGGACGAGCAACAGCGGCAACAACAACaagagcagcagcagcagcagcagcagcagcaacaggtTTCCCATCAACCCCACCACCGTCACCACCAACAGCAGCAGCCACAATTCGTTACGTCGAGGGCGAGAGAGCCGCCGGTCCCCGATGGTGGGGATAACCGGCAGCCGAGCGAGACCTCCGCGTCGCCGGAGGGAAATCGGCTCGGCAGTCACGCGCCTCGCTCCACGATGCATCGTTACTGTACTGAAACGCTCTCGACGACCGCGACCGATCACCACCATCCCCAccatcaccaccaccaccaccaccatcaACGCCACCACcatcagcagcagcagcagcaccaccaccaccatcaACAACAGCAGCACCATTTGCAGTCGGACGCGTCCCAACACGCCGCGCTTGCCTCGTCGGGTCATCGCCGCTTGGACGACCCAGAGacgcagcagcagcagcagtcGCAGTCGTTGTCCCAAACTCAGCAGCAGTCGGCGCAACAACAGCACCAGGAGGATCACGAGGACGTGGACAGGGTGAGCGGTATCGCGGCAGCCATGAGAGGCGCAAGGGGCGACTTCACTCTCGGCGTTCTGTTCCCGAATCTCGGCAACACCGGGGCGAACAGCATCGCGAACGACGTGGGCACGGCCGAtcatcatcaccatcatcaCCAGCAGCATCAACACCATCATCATCACTTGGACGAGGTGCTGCCCGACGACGCGTACCTTCAGCATCAGATACGCGGGGGCGGTGGcagcggtggcggcggcggtggtgcaGGCAGCGGAAGCGGCGGCGGCGGAGACGGTAGCGGCGCCGGCGGCGGATCGCCCACTCTGCGCACCGGCAGCTCGCCGAGCTCCAGTCGCAGCCCGCGCGACGATCAAGGACTCTCGTCGCCGCATCGACAGGGACAGCCTGACGGCGGCTACAGTCCGAACGAGCAGGGCAGACAGTCCTACGCTCACCTGACCGCCATGCAACCGCCCGCCTCGGTCCAGGCGAATCATCTGGCGCAGGACGCCGATCGCGTATCCGATCAGCTCTACATGGAGTCGATCTACGCTCACCACGCGGCCGGTACGCCCCATCATCACCAAGAACACGATCAGGCGAACTCGACGCCTCACTCGCCCAGCGGACCGTTACCCAGTCCGTTGTATCGCACCATAAGTGGAGTTGGCACCATGACGACTGCCACCACAGCGGGGGCTGGCGGAGGCACTTACGCTCTTCCGTACATGACGGGCAGCCCCACGGAACTGCCAACCTCCCCTCAGCAGCTCTGGAACGCTCAAGGTCTGAACACAGGTCTCTCCGGGATCTCCGAGGACTACGGTGGCAGCGACAAGACGTCAGGCACGGTGACTCATCAGGCCCTGCCTGGGTTTTCGCAACCGTTCTGCGGCAGACCGAGCTTCCGCGGCTACAGCCCGTCCTACCCCACGCAACAGACGAACAACGGGGGCGGGGCAGCGGTGAACGCCACCGCCTGGACCTACGTCCCGTCCTCGGACGACACCCTGGGGACGCAGTACGCGACGCCCTCCAGACGCCAAACAGTCAACCCGCCGCCGACCCACACGCAGCACcagctcaccaccaccaccactcTTAGCGGCATGCACAACATCGAGGCGGAATACTTTACGGAGGGCCGCGAGTGCGTGAACTGCGGCGCAATTTCCACCCCGTTGTGGCGACGGGACGGTACCGGCCATTACCTGTGCAACGCATGCGGTCTCTACCACAAGATGAACGGAATGAACCGACCCTTGGTCAAGCAGCCACGTCGACTGTCGGCGTCGAGGCGAGTCGGCACCTCGTGCAGTAATTGTCAGACGACGATGACGTCGTTGTGGCGTCGGAACGCCATGGGCGAGCCGGTTTGCAACGCCTGCGGTCTTTATTATAAATTGCACGGCGTGGTTAGGCCGCCCACCATGAAGAAGGACAGCATCCAGACGAGAAAGAGGAAGCCCAAGGGCGGCATGAAGACCACCGACACGTCGATATCCGGAAACGGTTCCGCTTGCTCgaacaccaacaacaacaacaataacagtaacaccaacaacaacaacatcaGCTTGAAATTGGAACCGGATACCTACGGTGAGCTGAGGATGGGCCACGCCGGAGTAGCAAAAATGACCTACAGCAACGCGCTGTACGGTTCGTTTCAGCCCTCGAATCGGATAGTCTCGTACCAGTCGAACCCTGGTATCTACTACGAGTCGATCGCGTcccagcaacaacaacagcagcaacagcaacagcaacaccaCCAGCATCAGCATCAGCAGCTCCTCGAGACCCATTCGCCGAAAGTCGAGTGCCCGTCGCCGCCGTGCGCGAATCGATCGCCGGTGATGATCTCAGCGAGCCACTCGCCTGATCATCACCAGCTGGCCGCGCCCCACATCGTCACCCTGGGCAATTCCTCGCCGAGCACAGGTGCCCCGAAGATCATTCTCGACAACGGTCACCTGGACAGACCCACGGTAGTCTCGAtatcctcttaa
- Protein Sequence
- MFAALIVYVDGTTEYGTEDRGTEVVAETFEGNEDGDAMTNAGTEELLRQQQLLERQQQRRQTGYEKRGSEEGGDGVGVLEAGQQEIENGAAASTGSADAAAIAVSADHGNDISATYDLHPLDYGEPDSPALRERGYLEQDSRRYGGGDPTTDEQQRQQQQEQQQQQQQQQQVSHQPHHRHHQQQQPQFVTSRAREPPVPDGGDNRQPSETSASPEGNRLGSHAPRSTMHRYCTETLSTTATDHHHPHHHHHHHHHQRHHHQQQQQHHHHHQQQQHHLQSDASQHAALASSGHRRLDDPETQQQQQSQSLSQTQQQSAQQQHQEDHEDVDRVSGIAAAMRGARGDFTLGVLFPNLGNTGANSIANDVGTADHHHHHHQQHQHHHHHLDEVLPDDAYLQHQIRGGGGSGGGGGGAGSGSGGGGDGSGAGGGSPTLRTGSSPSSSRSPRDDQGLSSPHRQGQPDGGYSPNEQGRQSYAHLTAMQPPASVQANHLAQDADRVSDQLYMESIYAHHAAGTPHHHQEHDQANSTPHSPSGPLPSPLYRTISGVGTMTTATTAGAGGGTYALPYMTGSPTELPTSPQQLWNAQGLNTGLSGISEDYGGSDKTSGTVTHQALPGFSQPFCGRPSFRGYSPSYPTQQTNNGGGAAVNATAWTYVPSSDDTLGTQYATPSRRQTVNPPPTHTQHQLTTTTTLSGMHNIEAEYFTEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLVKQPRRLSASRRVGTSCSNCQTTMTSLWRRNAMGEPVCNACGLYYKLHGVVRPPTMKKDSIQTRKRKPKGGMKTTDTSISGNGSACSNTNNNNNNSNTNNNNISLKLEPDTYGELRMGHAGVAKMTYSNALYGSFQPSNRIVSYQSNPGIYYESIASQQQQQQQQQQQHHQHQHQQLLETHSPKVECPSPPCANRSPVMISASHSPDHHQLAAPHIVTLGNSSPSTGAPKIILDNGHLDRPTVVSISS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00361282;
- 90% Identity
- iTF_00361282;
- 80% Identity
- -