Ccol028009.1
Basic Information
- Insect
- Colletes collaris
- Gene Symbol
- CSRNP3
- Assembly
- GCA_030068185.1
- Location
- JASGYR010000374.1:6688371-6694600[+]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1 3.2e+04 -5.1 2.6 150 150 338 338 273 392 0.57 2 2 9.2e-101 2.9e-96 322.4 8.7 1 218 1189 1399 1189 1399 0.92
Sequence Information
- Coding Sequence
- ATGAAATCGCCATCGGCCCGGGAACGTCCTTTCGAGGCCCAAGAGGATTCAACCACGATAGAATCGTCGGGAACGGTCGTCGCGTCTTCGACGCCGTCAACGACGGAGATCGAATCCACGGAGGTCGGCAGTGATGCCTCGAGCGCTGCCGGAGACGCGCACAATGGTGCTGGTCGGTTCGACGATGGCCAGGAATCCATCGACGCGTCGTCGCGCGAGGCTTCGAGAACGGAGCCGCAAGACGTGAGTTCGAACTCCGATCGCAACGGAACGAAGACGGAGGCTAACTCGAGCGAACCGGTCGCGCAGCAAGGCTGTCGCGACGAAGTGTCGACGGGTATGTGTTTCGACGGGGACGACGAGAGGAACGTTACCGGTTCGTCGTCGGTGTCTAGAAAGAGGCCAGCCAGCGACTTCCTGCCGATCAGCGCGGAGATCAAGCGGATCGGCGTCGAGATACCGGAGAACAAGGCTAATCAATCCCGTAGCGAAGTGAGAAGGATCTCGCCGGTGCTGGTCAGTCTTCGAGAGCGTACCCTGGGCGAGATATCTTTGTCCTCGGACTCGTGTCTCATCGCGAAGAACAACAGCATCCTCGACGATTCACTGACGAGCTCTTGCAGGACACCAATGAACGGAAGCTTCGATGATTGCGTGCGAATGAGCCACGATCCGGAGTCGACAGACGCCGAGGCGGCGCACAGTGAACGTGCCAGCAGCGCGGAGGACTCGGTGACCTGTCGTAGGAACCTCGAATATTCCGACGCGTACGTCGATGAGGACACGTTTTGCTCGCTGACGCTCGACAGTCCCGAGAGGGAGCATCATCCGTGCCAGGAGAAACAGTGCGAGGAACTCAGCGAATCGTGCGCGTGCGACGACAGTGTGCCCACGAACGACGCTTGCATGGCCGAGAAAAGCTCCAAGCTGCTGGCCGAGCACGTCGATTCGCCGGACAAACCGACGCCAGATAGAAAGGACAATAAGAGACCGATCCTGAAGAAGAAACCCAAGAAGAATGCTACGTGCGACGGTGCTTGCGACACGGATGCGAACACCGACTCTGAGGAATCGCAGAAGGAATCGTGTTTCGTCCAGAGGTGCGCCTATGAGAATACGAACGTCCAAACGACCGAGTATGAGAATCAGAGACAGATGAGCTCTCCCGTGGTAACCAGGTCGAAGTCACCGTTCCTTGAGCCACAGTCACCGTTACAGAGCTCTATGAAAGATTGCAAAGTGCTGCTGGCGAGGATATCGTCGCCGAAATTGGTGAAAACGGCGGTAGCGCAACCGACGAAGAACGAAGCGGCGTCTGAAGATGCTGCACAGAATCCGGAAGAGGACGAAGCAATCGTGCCTGCCGCATCGTCATCCCCTGCAGAAAATCTACAGCCGTTGGACGATGCCTTTTCGCCCCAGACGACGTCCAATTTAAGCGAAGAGACGAAACCATCCGCCGAGCACGAAGATCCACCGATGGAGTTGTGCTTGATTCAAAGGTGCGCTCACGAGAATGTCCAAAAGACTGAGCCGGAGAACCACTCGAACAAACAGATGGACTCTTCCGTCGTACCCAGACCAAAATCACCTGTCGAAGCAAACTCACCGTCGTTGAACACTACGAAAAGTAGCAAAATAATGATAGCGAAGGTAATGTCGCCGAAACTGACGAGATCCGTCATGGAGAAGTTTGTCAAAGACGAAACAACGTTCAAATCTATTATAAGAAGCCTGAGGGAGGACGAGGAAGTCCTTTTCACCTCATCGTCGCCCTCGAATAATCGAGATTCGTCAGAGGCGTCGGTCGATTCGCCTAAAGAGATGAAACTATCCGAACATAATGATTTACCGAGGGACACGTGCTCCGTTCAGAGGTGCACGCACGATGTTCAAAAGACTGAGCAAGAAGATCATGCAAAAAACCAATTAGGGTCTCCAATGCCTCTGAGATTGAAAACAACGCTTGCCGAGGAGCAATCATCACCATTGAGCGATATGAAAGAATGCAAAGTGATCCTAGCGAGGATAAGAACGGGGATGGAGAGTTTGGCGAAGGATGACACTGAATCTAGAGCTGCTACAAAGGATCTTGGAAAGAATGAAGAAGTCGTGCTCGCCTCATTGTCATCGTCCGTAGAGAGTCTACAGCCATTAAACAATCTAAACGCATCCGCAGTGACACCAAGTAGCCCAGAAGAGATGGAACTGTCCGCTGCCCATAAAGATCCACCGAAAGAATCATGTTTGGTCCAAAGGGGTGCTAACGAGAACACGGATGCCCAAAAGACTGAGCCTGAGGACCATTTTGAACAGCTGGTGGGCTCTCCCACAGTGCTCAGAGCGAAAACGCCTCCTGTCGAAGCAAACTCGCCATTGTTGAACGCTATGAAAAGTTGCAGAATAATGATAGCGAAGGTTACGTCGCCGAAACCGACGAGTTCCGTTGCGGAGAACTTTGTCAAAGACGAAACAACGTCCGAATCTATCGTAAGGAGCCTGAGGAAGGACGAGGAAGTCGTTTTCACCTCATCGTCACCCTCCACGAGTAGTTCACAGCTAACAAATAATCGAGACTCATTAGATACGCTAGTTGATTCAACTAAAGAGATGAAACCATCTGAACAGAAAGATTTACCGAAGGACACGTGTTTCGTTCAGAGGTGCACGCACGACGTTCAAAAGACCGAGCCAGAAGACCGCGCGAAGAAACAGTTGGCGTCTCCAATGTCTCTGAGATTGAAAACGCCGTCTCCCGAAGAGCAATCACCATCATCGAATGCTATGAAAGAATGCAAAGTGATGCTGGCGAGGGTGAGAACGGCGGTGGAGAATTTGATCAAAGACGAAACCGCATCCAGAGCTGTTATAAAGAATCTTGGAGAGAACGAAGAGGTGGTGTTCACCTCATTGTCATCGTCCGTGGAGAATCTGCAGCCATTGAACAATCTAGACACGTCCGAGGTGACGCCAGGTTCACCGGAGTTGGAACCATCCGCTGACGTTCCAGAAGCCGTGGACACAGAGACGGAAACCGAGACCGGCTCCGACAGCTCCGAAGTGTCCGTGACGAACGTACGCCTTCGTGGTTGCGACGACGATCCTGTTTCCGACCAAATCTCCTGTCCAGAGAGCGAGTCTATGTGTTGCGTCGATATCAATTCGGAGATCATAACCAGGCTAGAGGCGGAGAGGCCAGAAGCTTTCACCGAGGATTCGGCTGAAAGTCTGGCGCTCGCCACTGGTGCTAGGGACGAAGTTAGGTCGGATGGAAGCGATTCTGGCCTAGGAAGCGAAATTCCTGGCGATCATGGACCTGCACCTGCCCCTGAAAGCGATTCCGAGACATCTTTCTTGGATAGAATACCTGACGATATTCTTTCTGACAAAGAGAAAGCCGCGAATCAACTGGACTCTTTCGCGCCCACCGTTGCTACTCTCAGTACGCCGCAGACACCATTGCCGGTTTTTTCCAGTCCATCGAAGAGCAATTTAAAAAGAAGATTGATAGACAGTATGGAAGGTGCTCCCACCCCGAAGAGAAGCAACACCGACGAGTCCATGAAAAAGAAACGCAACATTCACTTCGACGCCGTTACTGTGTACTACTTTCCTAGGGCGCAAGGTTTCACTTGTGTGCCTTCCCAGGGTGGTAGTACGCTTGGTATGAGTGCGACGCACACTCACGCCGAAAGATTCTCATTGTCGGAGCACGCTACCGAGCAGAGGCGAATCCATCGCGCTAGATTGGCGCAGCTACGTTCCGAACGTGCTGCAAATTGTGTGGTCGAGGCGGCTTCCAGTTCGGAGGATCCCAGCGACGACACAGACGAGGAGCAAAGCGATAACGAGGAGCTGGACATCGATAGTTACTACTTCCTCCAGCCAGTGCCTACGTGGCAAAGACGAGCCTTACTTAGAGCAGCAGGTGTACGTAGAATAGACGCCGTTGAGAAGGACGAGTGCCGTGACATTAGAGCTAGCAGAGAGCATTGTGGTTGTGGATGCAAAGGATATTGCGATCCTGAGAGCTGTCCATGCAGTCGTGCCAATGTAAAGTGTCAGGTCGATCGAGCGGGATTTCCATGTGGATGTACACGCGACGGCTGCGCGAACAGTTCAGGTAGGATTGAGTTCAATCCGGTTCGCGTGCGGACGCACTTCATTCACACATTGATGCGGTTAGAGCTAGAAAAAAAGCAGCGTGAAGAAGAAGGTACGGATCATGACGCTTCCGACAATCAGAATGGTAGAAGTCCTTTAAGAGAAATCAATTTAGGGTCTGTAATAGAGAATAGAAACGCGGAGTCGTGCCTGAACGGGGGTGGTTTCACGACGCTGCATTACGAGAATCACGACGCCGGGGACGGCGGGGCTAATTGTCAACCAGAAGTACCTGGTACAAGAGAAGATAGCCTGGATCTTTACGCTATCAGGGATGATTGTTATCCTAGCGAGGATACTGTTGATGGTACGCAAGGACCTCAAAGGAAACTTCATCCTGAGTTTAGTCAAGCGTTTCAAACGTTCTCGAGCCAAACGAATGTCGGAGTGAACTTCCAACAGCCTACTTATCAGGACTACCAACCTTACGCTAACCTTCCTTCCACATCTAGGGTGCAATTCCAGCCACAGTTTCAAGCGGTGCCAGGAAATTCAGGGTTCTCACATTACGCGCCTTACGGACAAGACACTGGATCGATTCAGGGAAACTGCCAGGTCCATCCCGAACAACATTCTTCCAATTACGAAACTAGCTTCGCCCAGGACGAATCAACCGGATCGCAATACACAAATCTGAATTCGGTGCAACCAATGAACACTGTTCAGCAAATGGGTAAACTAGAACCGTTCTCGGAACTTTTGTCTGGTAGATACTCGTATTACGGAGAAATGGAGCCGCAGGCGCACGGTACTTATCACGGAAACGGAACGAAAGTCGAGGTAGAGAAAAGTAATGAACAACAGTCGGAAAGTACGGAAGAGTGTGACGAAAATTTTGGGGAGATCATTAAGAAGTCAATGGTCGAAACTGTATCCGCTTAG
- Protein Sequence
- MKSPSARERPFEAQEDSTTIESSGTVVASSTPSTTEIESTEVGSDASSAAGDAHNGAGRFDDGQESIDASSREASRTEPQDVSSNSDRNGTKTEANSSEPVAQQGCRDEVSTGMCFDGDDERNVTGSSSVSRKRPASDFLPISAEIKRIGVEIPENKANQSRSEVRRISPVLVSLRERTLGEISLSSDSCLIAKNNSILDDSLTSSCRTPMNGSFDDCVRMSHDPESTDAEAAHSERASSAEDSVTCRRNLEYSDAYVDEDTFCSLTLDSPEREHHPCQEKQCEELSESCACDDSVPTNDACMAEKSSKLLAEHVDSPDKPTPDRKDNKRPILKKKPKKNATCDGACDTDANTDSEESQKESCFVQRCAYENTNVQTTEYENQRQMSSPVVTRSKSPFLEPQSPLQSSMKDCKVLLARISSPKLVKTAVAQPTKNEAASEDAAQNPEEDEAIVPAASSSPAENLQPLDDAFSPQTTSNLSEETKPSAEHEDPPMELCLIQRCAHENVQKTEPENHSNKQMDSSVVPRPKSPVEANSPSLNTTKSSKIMIAKVMSPKLTRSVMEKFVKDETTFKSIIRSLREDEEVLFTSSSPSNNRDSSEASVDSPKEMKLSEHNDLPRDTCSVQRCTHDVQKTEQEDHAKNQLGSPMPLRLKTTLAEEQSSPLSDMKECKVILARIRTGMESLAKDDTESRAATKDLGKNEEVVLASLSSSVESLQPLNNLNASAVTPSSPEEMELSAAHKDPPKESCLVQRGANENTDAQKTEPEDHFEQLVGSPTVLRAKTPPVEANSPLLNAMKSCRIMIAKVTSPKPTSSVAENFVKDETTSESIVRSLRKDEEVVFTSSSPSTSSSQLTNNRDSLDTLVDSTKEMKPSEQKDLPKDTCFVQRCTHDVQKTEPEDRAKKQLASPMSLRLKTPSPEEQSPSSNAMKECKVMLARVRTAVENLIKDETASRAVIKNLGENEEVVFTSLSSSVENLQPLNNLDTSEVTPGSPELEPSADVPEAVDTETETETGSDSSEVSVTNVRLRGCDDDPVSDQISCPESESMCCVDINSEIITRLEAERPEAFTEDSAESLALATGARDEVRSDGSDSGLGSEIPGDHGPAPAPESDSETSFLDRIPDDILSDKEKAANQLDSFAPTVATLSTPQTPLPVFSSPSKSNLKRRLIDSMEGAPTPKRSNTDESMKKKRNIHFDAVTVYYFPRAQGFTCVPSQGGSTLGMSATHTHAERFSLSEHATEQRRIHRARLAQLRSERAANCVVEAASSSEDPSDDTDEEQSDNEELDIDSYYFLQPVPTWQRRALLRAAGVRRIDAVEKDECRDIRASREHCGCGCKGYCDPESCPCSRANVKCQVDRAGFPCGCTRDGCANSSGRIEFNPVRVRTHFIHTLMRLELEKKQREEEGTDHDASDNQNGRSPLREINLGSVIENRNAESCLNGGGFTTLHYENHDAGDGGANCQPEVPGTREDSLDLYAIRDDCYPSEDTVDGTQGPQRKLHPEFSQAFQTFSSQTNVGVNFQQPTYQDYQPYANLPSTSRVQFQPQFQAVPGNSGFSHYAPYGQDTGSIQGNCQVHPEQHSSNYETSFAQDESTGSQYTNLNSVQPMNTVQQMGKLEPFSELLSGRYSYYGEMEPQAHGTYHGNGTKVEVEKSNEQQSESTEECDENFGEIIKKSMVETVSA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00360896;
- 90% Identity
- iTF_00360896;
- 80% Identity
- -