Ccol021969.1
Basic Information
- Insect
- Colletes collaris
- Gene Symbol
- F54F2.9
- Assembly
- GCA_030068185.1
- Location
- JASGYR010000321.1:17091622-17093368[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.7e-08 2.3e-05 25.2 0.0 2 38 294 333 293 335 0.87 2 2 5e-10 6.9e-07 30.1 0.2 3 45 375 422 374 423 0.89
Sequence Information
- Coding Sequence
- atgagagTGTCATTAGTAATATTGGGAGTTTTGTCCTTTTTTGACGTGTATAGATTCACGAACGCTTGGGATAATGACGATCTGGAGGTGTTTGACGTTTTCGAGGAAGTCAATCAAAACTTCTATGAAGTGCTCGGTGTCCCACAGGCTGCCAATGCCTCGGAGATTAAAAAGGCTTTTAGGCGATTGTCCCTCCAATTGCACCCAGACAAAAATGATGCAGAGGACGCGGAGCAACAGTTCAGAAAACTGGTCGCTGTGTATGATATATTGAAAGATCCTGGAAAAAGACAGAGATATGATAATGTACTTATTAACGGATTGCCAAATTGGCGATCGGCTGTATATTATTACCGTCATGTACGGAAAATGGGTCTTGTAGAATTAAGTATGATTTTATTCATAGTTATTACGGTCGgacaatatttggtagcatggGCTGCATATTTTGAGAagagatatacatatGAGCAAGTGTTGGGTAGTAAGCTTCAGAAAATgcagaaaaagaataaaaagggGAAAATGGACGTCCCTGATTTAGCAGATATTTTGGAAAAGATCCCCACTCCGAGCATGTGGAATACACTTCCGTTTCAATTACCGCGTTGGATAATATCGTTCACATTATCCATCCCTAATCTCATGCGCGCCATGCGCGACGTTTTAGAGGAAAGAAAACGTAGGAAAAAACAGGAAGAGGAAGAAGCATTAGCACAAGAAATTGAACAACCGGAACCGGAACCCGTATCTCGTACCAGAAGACGTAGACCTGGTTTCACGCCGCAAGAGAGAAGCGTTAATAACGTCAAAGATGTTTTAAAGAGAGACTGTGATCAAACGAATCATGTCTATCAGAAGCCCGCTACGTCCGGCGGCGGTTTGTGGACTGACGATGATATATTAGAGTTAATAAAGCTTGTAAAGAAATACCCGAGCGGTACGTCGGAGAGATGGGATAAAATTGCGGATGCTATGAATCGTACAGTCACGGACGTTACATACATGGCGAAGAAGGTAAAAGATGAAAGGTTAAAACCGAGCGTTGCTACGGAAGAAACCGTGGCAGAGGAACGtccgaaaaaaataaaaacacgcGTTGAAAATGTTGACAATGTTACCGAATGGAGTCAGGAGCAACAAAAAGCGTTCGAAGCCGCGCTTATAAAATATCCAAAGGGCATGTCTATAGACAGATGGGAAAAAATTGCAAACTGCGTCGAAGGGAAAACGAAGGATGAATGCCAAACAAGATATAGACAATTGGTGGAATTTGTAAAGAAGAAGCAACAAACTCAGTAG
- Protein Sequence
- MRVSLVILGVLSFFDVYRFTNAWDNDDLEVFDVFEEVNQNFYEVLGVPQAANASEIKKAFRRLSLQLHPDKNDAEDAEQQFRKLVAVYDILKDPGKRQRYDNVLINGLPNWRSAVYYYRHVRKMGLVELSMILFIVITVGQYLVAWAAYFEKRYTYEQVLGSKLQKMQKKNKKGKMDVPDLADILEKIPTPSMWNTLPFQLPRWIISFTLSIPNLMRAMRDVLEERKRRKKQEEEEALAQEIEQPEPEPVSRTRRRRPGFTPQERSVNNVKDVLKRDCDQTNHVYQKPATSGGGLWTDDDILELIKLVKKYPSGTSERWDKIADAMNRTVTDVTYMAKKVKDERLKPSVATEETVAEERPKKIKTRVENVDNVTEWSQEQQKAFEAALIKYPKGMSIDRWEKIANCVEGKTKDECQTRYRQLVEFVKKKQQTQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00302959;
- 90% Identity
- iTF_00360837;
- 80% Identity
- -