Ccol005982.1
Basic Information
- Insect
- Colletes collaris
- Gene Symbol
- kn
- Assembly
- GCA_030068185.1
- Location
- JASGYR010000078.1:28510044-28511906[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.5e-33 4.7e-29 101.9 3.1 137 183 1 47 1 49 0.97
Sequence Information
- Coding Sequence
- ATGTACGAGGGACAAGATAAGAATCCTGAGATGTGCAGAGTCCTCCTGACTCATGAGGTGATGTGCAGTCGGTGTTGCGATAAAAAAAGCTGCGGAAACCGAAACGAAACGCCAAGCGACCCTGTGATCATCGACCGAGTACCAAGATGGACGCCGGTGCCCGATGGAAAGATCTTTTACGAGGGAATAGAATCGTCCTTGTCAAAGGTGGGTGTATGGTGTCGTATTATTCGTTCAACGTCAGGAAACGAACGCGTATCGTTGAATATGAAATTTCATAGAAACATCAACGGGTATGATACTCGGTTTACCGCCCTCGGTATCATCGTTGGCAACGATCTGCGAAATAAGGGCCCAGATAACTCGTTCTTGAAGATACCCAACGACGAGATAGCGTCGCGTACCGTCAGAACTAGAAACCCAGGATATTTAGGCTTGCAAAATACATTTCCTACGAGGTGTGGCGAGGCTGCTAGGTAG
- Protein Sequence
- MYEGQDKNPEMCRVLLTHEVMCSRCCDKKSCGNRNETPSDPVIIDRVPRWTPVPDGKIFYEGIESSLSKVGVWCRIIRSTSGNERVSLNMKFHRNINGYDTRFTALGIIVGNDLRNKGPDNSFLKIPNDEIASRTVRTRNPGYLGLQNTFPTRCGEAAR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -