Ccol005981.2
Basic Information
- Insect
- Colletes collaris
- Gene Symbol
- kn
- Assembly
- GCA_030068185.1
- Location
- JASGYR010000078.1:28439649-28452670[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.8e-144 1.9e-140 469.7 5.8 182 564 38 414 31 425 0.87
Sequence Information
- Coding Sequence
- ATGCAATATTCAGGCTTACTTTCCGGGCAAGTTCACGTTCTAATTAAGTTCTCAACGTTGAAAAGCGTTAAGCACCTTGTCAACCGTTTAACTGTTGTTCATTCTGCTTTCAGATTCTTCCTTAAGTTCTTTCTCAAGTGCAACCAGAACTGCCTTAAGAATGCCGGCAACCCACGCGATATGAGACGCTTCCAGGTGGTCATTTCCACGCAAGTAGGAGTAGAGGGGCCACTACTAGCAGTCTCGGACAACATGTTCGTCCACAACAATAGCAAACACGGGCGCAGAGCGAAACGATTGGATCCCAGCGATCCCGGCGAATACAACAGTCTCTATACACCCGTACCTCTCCAAACGCCGTGCATAAAAGCGATATCGCCAAACGAAGGATGGACGTCAGGTGGGTCCACAGTAATAATCATTGGTGAAAACTTCTTCGATGGACTTCAAGTAGTTTTTGGGTCGATGTTGGTTTGGAGCGAGTTAATCACGCCAAATGCGATCAGAGTACAAACTCCGCCGAGACAGATACCAGGTGTCGTTGAAGTCACACTATCCTATAAGACTAAACAATTTTGCAAAGGGGCGCCTGGTAGATTCGTTTACGTTTCATTAAATGAGCCTACGATCGACTACGGCTTCCAAAGGTTACAGAAGCTTATTCCGCGACATCCTGGCGACCCCGAAAAATTACCGAAGGAAATTATACTGAAGAGGGCGGCAGATCTGGCGGAAGCTTTATACAGTATGCCCAGAAGCGGAAACGCGGGAATCACAGGTGCTCCAAGGAGTCCGGGATCGGGTCATCCGCCCGCGCCTCCGACCTCCAGTTCAGCGACGGCGTTCAACTCATACACAGGGCAACTTGCAGTGGCGGTACAGGAAAATGGTAGTGCGGCGAAATGGACAGACGACGGTAGTTCCGTGACGACAGGAGCTGGTGCTGGAGGCGGTGGCGGTGGTAGCGTTGGAGGAAGCGTCGGTGGCAACGTCGACGCCTATAGGCAGAGCAGTAGCGCGAGTCCACGTGGGGTTGTAACCGGTGGCGGTTATTGCGGAAGTTCGGCCAGTACGCCTCACAGTCACAGCACCAATGGAAGTTATTCCGTCGCCAACCCTTACACCGGTAGCCCGACGCTTTACACATCGCCGCACGAACAGTATGGCATTTTCTATACGTCTGGGGATGGGAGTGCGTTCGCCCCCGTAGTACGACCACCGACCACCTCAGTCCCACCGCACTGGTCCACACAGCACCACCTCGCCACAGCCGCCCAGTAA
- Protein Sequence
- MQYSGLLSGQVHVLIKFSTLKSVKHLVNRLTVVHSAFRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVGVEGPLLAVSDNMFVHNNSKHGRRAKRLDPSDPGEYNSLYTPVPLQTPCIKAISPNEGWTSGGSTVIIIGENFFDGLQVVFGSMLVWSELITPNAIRVQTPPRQIPGVVEVTLSYKTKQFCKGAPGRFVYVSLNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRSGNAGITGAPRSPGSGHPPAPPTSSSATAFNSYTGQLAVAVQENGSAAKWTDDGSSVTTGAGAGGGGGGSVGGSVGGNVDAYRQSSSASPRGVVTGGGYCGSSASTPHSHSTNGSYSVANPYTGSPTLYTSPHEQYGIFYTSGDGSAFAPVVRPPTTSVPPHWSTQHHLATAAQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01070145;
- 90% Identity
- iTF_00360699;
- 80% Identity
- iTF_00360699;