Ccol027166.1
Basic Information
- Insect
- Colletes collaris
- Gene Symbol
- KDM5A
- Assembly
- GCA_030068185.1
- Location
- JASGYR010000373.1:8858532-8869536[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.4e-25 8.4e-22 78.2 0.0 2 89 109 192 108 192 0.94 2 2 3.6 1.3e+04 -2.5 0.1 49 81 821 851 818 856 0.65
Sequence Information
- Coding Sequence
- ATGGTATCGAGGTTCGACACGAATTTCGGTTGCGAGGATTTTTTCGGGACTTATCACTGCACCCAAGACATGGCTTGCGATCGTGGTGATTCGGACTTCGAGTTCATTATACCGCCAGAGGCGCCGGTCTTCGAACCGAGTATTGAAGAGTTTCACGACCCCCTTGGCTACATTGCAAAAATACGACCGATCGCGGAGAAGTCTGGTATTTGTAAGATCAAACCGCCGCCTAATTGGCAGCCACCATTTGCTGTTGAtgttgataaatttaaatttgttccaCGAATACAAAGATTGAATGAATTGGAGGCAAAAACAAGGATAAAACTAAATTTTTTAGATCAAATTGCAAAGTTTTGGGAACTACAAGGTTCCTCTTTAAAAATTCCTCTTGTAGAACGCAAAGCTCTTGATTTATATTCTTTACACAAGATTGTCACAGATGAAGGTGGAATTGAAACAGTAACAAGGGAAAGAAGGTGggcaaaaattgcaaataaattagGTTATCCATCTGGACGTAGCGTAGGCagcatattaaaaaatcattatgaACGAATTTTGTATCCATTCGATGTCTTTAAGCAAGGGAAAACTTTGACAGACATTAAAATTGAACCAGATTCCAATGTGAGTGAAAAGAAGGACAGAGACTATAAACCACATGGAATCATCTCACGGCAGCAAATCAAACCTCCAGCTGAGAAATTTTCACGGCGGTCAAAAAGATTCACTGGCCAAGAAGAAAAACAGGAAGTATCTATTAAACAAGAAGATTGTAAGGAAGAATGTGATTCTGACAATGACTGTAAAGATGGACTGAGAAGTAAAAATGGTGATGATAATAGTAAAGAGCTTAAGAAATTACAGTTTTACGGACCTGGCCCAAAAATGGCTGGATTTAATACCAAAGAAGCAAAGAAATCTAATAAGACTAGAGGTGTGAAACTTGTTTATGAATTTGATCCTTTGGCAAAATATATTTGTCACAATTGTGGAAGAGGTGACAATGAAGAAAATATGCTTCTCTGTGATGGATGTGACGATAGTTATCATACTTTCTGTCTTATGCCACCGTTAACAGAAATACCAAAAGGTGATTGGCGGTGTCCAAAGTGTGTTGCCGAAGAAGTTTCCAAGCCGATGGAAGCATTTGGATTTGAGCAAGCACAGAGGGAGTATACTCTTCAACAATTTGGAGAAATGGCTGATCAATTTAAGAGCGATTACTTCAACATGCCTGTACATATGGTGCCAACATCCTTAGTAGAAAAAGAATTTTGGCGAATAGTTTCTTCGATCGATGAAGATGTAACAGTTGAATACGGGGCAGATTTACACACAATGGATCATGGTTCGGGATTTCCAACAAAAACAAGCGTTAATTTATTTACATGCGACCAAGAATATGCTGAATCTTCATGGAACTTAAATAATTTGCCAGTTTTACGTACGAGCGTATTAGGTCACATTAATGCTGACATCAGTGGCATGAAAGTACCATGGATGTACGTAGGCATGTGTTTTGCAACATTTTGCTGGCACAACGAGGATCACTGGAGCTACTCGATCAACTATCTACACTGGGGAGAACCAAAAACGTGGTACGGTGTTCCAGGCGCTCAGGCAGAACGATTTGAGCATTCAATGAAATCTGCTGCTCCAGAACTATTTCATAGTCAGCCAGATTTGCTCCATCAGTTGGTTACTATCATGAATCCAAACATTTTAACAAGCGAAGGTGTTCCAGTATTCAGAACTGATCAGCACGCGGGAGAATTTGTTGTGACATTTCCAAGAGCGTACCATGCCGGATTCAATCAGGGATATAACTTCGCTGAAGCTGTGAATTTCGCACCTGCCGATTGGCTTAAAATTGGCCGGGAATGTATTACGCATTATTCGAATTTAAGACGATTTTGTGTATTTTCTCATGATGAATTGGTATGCAAAATGTCACTGGATCCAGATTCATTGGATATAGGAATTGCGACCGCAACTTATCATGACATGCTGCAGATGGTAGACGACGAgaaaaaattacgaaaaaatttATTGGAATGGGGCGTAACAGAAGCAGAACGCGAAGCATTTGAACTTTTACCCGATGATGAGAGACAGTGTGAAGCGTGCAAAACAACTTGTTTCTTAAGTGCGGTTACATGTTCATGCCAGAGTTCACAGTTAGTTTGCTTGAGACATTTTACCGAACTTTGTGATTGCTCCCCAGAGAAGCACACATTACGTTATCGATATACTTTAGACGAACTACCCATTATGTtacaaaagttaaaattaaaagCAGAGTCTTTTGACTCATGGGTGACAAAAGTAAAAGAAGCAATGGATCCTGATAAGAAGAGTGATAAAATTGAGTTGAACGAGTTGAAGGAGCTTTTGAACGAAGCGGAAAATAAAAAGTTCCCAGAAAGTGAGCTATTGACAGCTTTAACAACTGCTGTACAAGATGCTGAAAAGTGTGCAAGTGTCGCGCAACAACTTCTAAACAACAAGCAGCGAACCAGaACCAGACAATCGGTTGAAACTAAATATAAACTTACAGTAGAAGAATTAActcttttttataaagaaatcaCAAATTTGTGCTGTGAACTGAAAGAATCAGACGGTGTAAAATTTATACTTGATCAAGTGTTACAATTTCAAAAAGAAGCTGAGGAATTAGATGCTAAGGATAATTGTGATATTGAACAGCTGGAAAAATGTATCGATTTTGGAGATTCTATTTGTATCGAGCTACCTCAACTCGTTTGTTTGAAACAAaaattaacacaaattCAGTGGCTTGACGAAGTAAAGTCTATTCAAGAAGATCCAAAATCTATACACCGCGACGATTTagcaaaattaattgaaaaaggTATGACGATACCGCCTCATTTAAGTATAGAAAATACACTTTCCGAACTACAAGCGTTAATGATTGGAATCGATAAATGGGAAGAGAAAGCAAAGTTGTATCTTCATATGAAAAGCAGACAAAATATATCGTCTTTAGAAGAATTTATTCGCGAAGCCGACGAAGTAGAAGCTTACTTACCAAGTTTAGATATTCTCCAAGACACATTGAACAAAGCAAAAAATTGGACAAAAATGGTAGAGGAGGTGCAAGCGAGAGAAAATTTTCCTTACTATGATACGTTAGATGATCTGATTAAAAAGGGCAGAAGTATTCCGTTGCACCTGGATGCTTTACCAATTTTAGAGTCTACTCTTTCGCAAGCAAAGGCTTGGAAAGAAAGGACAGCGAGAACATTCCTAAGGAAAAATTCACATTATACCTTAATGGAGGCTTTATCTCCGCGAATTGGAGTTGGTATACAAGCGTTGAAGGCTAAGAAGAGTAAGAGTGAAGAGTCTGTAGGACCTGTCTTTGTCTGTGATACAAAATTGGACGATTCCAATGATTCGGCTACCGTCGTGGCTGCGTTTAAATTAGCCGAGCAGCGCGAAATGGAAGCGATGAGAAATTTAAGAGAgagaaatttaatgaaaaccGAGATAGACGATTCTAGGTATTGCGTCTGTCGTCGGCCAAGATTCGGGCTTATGCTTCAATGCGAACTTTGTAAAGATTGGTTTCATTCCAATTGTGTACCATTACCAAAAACGTCGTACAAAGGAAAATTACCAATGTCGAGGGAGATTAAGTTTTTATGCCCTTGTTGTTTACGCTCGCGGCGACCACGGCTAGAAACAATTTTGGCACTTTTAGTCAGTCTTCAAAAAATTCCAATTCGTTTACCAGAAGGTGAGGCATTGCAATGTCTAACAGAACGTGCAATGAATTGGCAGGATCGAGCTCGGCAAGCATTGGCTACGGATGAGATTTCATCGGCGTTAGCAAAGTTATCCGTTCTGTCGCAAAAATTAGTAGAAGCCGCGGCAAGAGAAAAGACAGAAAAGATAATTAGCAGCGAGTTGAAAAAAGCGGCGAATAACCCCGAGCTGCATCAAAGGGTACAAGCAATTGCGCCACTTAGCGGTGTACACTCGGACGATAGTGCACTTAGTACTGCAgacgacgacgacgatgttGTTACTATAGACGACGACGAACCAAGTTGCAGTACGTTTAACAGTAACGAACACGCTTACTCTTATAtATCTAAAGTACAACGTAAATCTCAGTCAAACGATTCAACCGAAGCCGCAGTTATGCTCTCGCAGTCTGCAAGGTTACGCCTAGAAGAATTAATGATGGAAGGTGATCTGTTGGAGGTTGCGCTCGATGAAACGCAACACATATGGCGCATATTGAGTCACACAAACAGTCCAAGTACTGTTCGCAAATACGCAGCATACGAAGAAGTACAAACCAATGTAACCACCCAGGATCCAAAGGATATAAAAAAGCGGGGAAGGAAAAGGAAGTCCGAGGAGTTCGAGCTACTTAAGAAACTCGGACGGCAAAAAATGGAAGAGAAGAATTTAGCCAAACGTAAGGGTttacagaaagaaaagaaatctgCCAGTTCCCCGTTGCCCTTAAAGCGCGGACCTCGAAAGATGAAACGCAAAGAAGGGGACGAGGTGCCGAAGAAAAGGGGTGGTAACCGAAAGAAGACCAAACAGGACACTTCCGACGAAGAAGATGATTGCGCAGCTGTCAATTGCTTACGACCCAGCGGGAGGGAAGTTGATTGGGTTCAGTGCGATGGTGGCTGCGAGGGTTGGTTCCACATGCACTGCGTCGGATTGGATCGTACGGAAATAGCGGAAGAAGACGATTACATTTGTAGTAATTGCAAAGAAGCAGAACAAAATTCGACGTCGAGAGCGCCAGATCCGCTAGCTGAATCGTTAGGCCTGGATGCACTTCTTTCCCTTTCTCAATCTCAGGGATACCAGGGCACAGACAGTGAAGCAGACATCCAGGAAACGACATCCTTCGTCAGGACCTACTAG
- Protein Sequence
- MVSRFDTNFGCEDFFGTYHCTQDMACDRGDSDFEFIIPPEAPVFEPSIEEFHDPLGYIAKIRPIAEKSGICKIKPPPNWQPPFAVDVDKFKFVPRIQRLNELEAKTRIKLNFLDQIAKFWELQGSSLKIPLVERKALDLYSLHKIVTDEGGIETVTRERRWAKIANKLGYPSGRSVGSILKNHYERILYPFDVFKQGKTLTDIKIEPDSNVSEKKDRDYKPHGIISRQQIKPPAEKFSRRSKRFTGQEEKQEVSIKQEDCKEECDSDNDCKDGLRSKNGDDNSKELKKLQFYGPGPKMAGFNTKEAKKSNKTRGVKLVYEFDPLAKYICHNCGRGDNEENMLLCDGCDDSYHTFCLMPPLTEIPKGDWRCPKCVAEEVSKPMEAFGFEQAQREYTLQQFGEMADQFKSDYFNMPVHMVPTSLVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKTSVNLFTCDQEYAESSWNLNNLPVLRTSVLGHINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGAQAERFEHSMKSAAPELFHSQPDLLHQLVTIMNPNILTSEGVPVFRTDQHAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPADWLKIGRECITHYSNLRRFCVFSHDELVCKMSLDPDSLDIGIATATYHDMLQMVDDEKKLRKNLLEWGVTEAEREAFELLPDDERQCEACKTTCFLSAVTCSCQSSQLVCLRHFTELCDCSPEKHTLRYRYTLDELPIMLQKLKLKAESFDSWVTKVKEAMDPDKKSDKIELNELKELLNEAENKKFPESELLTALTTAVQDAEKCASVAQQLLNNKQRTRTRQSVETKYKLTVEELTLFYKEITNLCCELKESDGVKFILDQVLQFQKEAEELDAKDNCDIEQLEKCIDFGDSICIELPQLVCLKQKLTQIQWLDEVKSIQEDPKSIHRDDLAKLIEKGMTIPPHLSIENTLSELQALMIGIDKWEEKAKLYLHMKSRQNISSLEEFIREADEVEAYLPSLDILQDTLNKAKNWTKMVEEVQARENFPYYDTLDDLIKKGRSIPLHLDALPILESTLSQAKAWKERTARTFLRKNSHYTLMEALSPRIGVGIQALKAKKSKSEESVGPVFVCDTKLDDSNDSATVVAAFKLAEQREMEAMRNLRERNLMKTEIDDSRYCVCRRPRFGLMLQCELCKDWFHSNCVPLPKTSYKGKLPMSREIKFLCPCCLRSRRPRLETILALLVSLQKIPIRLPEGEALQCLTERAMNWQDRARQALATDEISSALAKLSVLSQKLVEAAAREKTEKIISSELKKAANNPELHQRVQAIAPLSGVHSDDSALSTADDDDDVVTIDDDEPSCSTFNSNEHAYSYISKVQRKSQSNDSTEAAVMLSQSARLRLEELMMEGDLLEVALDETQHIWRILSHTNSPSTVRKYAAYEEVQTNVTTQDPKDIKKRGRKRKSEEFELLKKLGRQKMEEKNLAKRKGLQKEKKSASSPLPLKRGPRKMKRKEGDEVPKKRGGNRKKTKQDTSDEEDDCAAVNCLRPSGREVDWVQCDGGCEGWFHMHCVGLDRTEIAEEDDYICSNCKEAEQNSTSRAPDPLAESLGLDALLSLSQSQGYQGTDSEADIQETTSFVRTY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00873598;
- 90% Identity
- iTF_00141055;
- 80% Identity
- -